Array 1 4990-4423 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMB01000013.1 Paenibacillus elgii NBRC 100335 PEL01S_CON000013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 4989 30 100.0 35 .............................. CGGCAACGTGGCTGACATCTTCGATACAAGGGGGA 4924 30 100.0 36 .............................. TGTTGCCTCAAACAATGCCAGAAGCTCTAAGAATGT 4858 30 100.0 40 .............................. TCTGACTGCGGCACAGCCAGCTCATTGATGTATAAACCCG 4788 30 100.0 39 .............................. ACAGCCTTTGTAGGTATTATTGTAACCTATGGAGACCAA 4719 30 100.0 38 .............................. CGGTCAGGGCGGGAGTATCGGCCCGCTGACGACCACCC 4651 30 100.0 35 .............................. TCCAAATACGGTAACAACCCGAACTCATAGTCATG 4586 30 100.0 37 .............................. GAGGGTGGAAACGTGATGCGTGGATTGCCCCCGCAAT 4519 30 100.0 36 .............................. AGGTTCTTTCAAAAGAAACGGTAATGAGTAAGGTTT 4453 30 83.3 0 ....A.......T...C.GA.......... | G [4430] ========== ====== ====== ====== ============================== ======================================== ================== 9 30 98.1 37 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : CTGGCCGCGATCCCGGTTCCCGACCCGAAGGTGGAATCGAAGAAGACGTTTACCGCTGTAGAAGAGTCCTCGAAAACGGACCCGTACGGCTTGGAGCGCTCCAGCTTCGTTGAAGTGAAGAAGGGGCACTGGGTGGCGATTGCTGAGGGGGAGGGTTAGATGAGGGTTTGGGGACGAGCGGGTAGGGGATTAGGAATTAGGGTCGATTCCGTTCGCTGTGCTCGGCTGCTGGAAGAGATTGAAGGCGAGGATACTAAAGAGGTAAAATTAGCTTAAGCAATAGGAATAAACCAGAGCGTCAGAGTTTAATTGCGTTGGAAAAAAACGGGCAAAGTTGTATAATGTAACTGCGCATTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCAGGGGATCGACGACAACAAGGGCCGCGTGGGAACAGGGATTTTGGTAGTTGGCGTGGGGGAGAATTGTTTGTTAGATATGTGGGAATAGCGTAACGACGGCGTTTTTGTGG # Right flank : ATCCTACGGCGACTGCGGACGTCATGGTCGAAGTTGTTCCGGCTAGGCATATTTTCGGACTCCCAACATCTAGAGCTTCGAAAAAATGGATCTGGGTTTGAAGGAAGAAAAGTCTTTACGGGTCGACACCTGTATCCGGAGCAACATGATTGGAGATAAACCTGCATCAACTTGAAGCGCTGCATATACCGTACACCGTCGTTGGAGAGGCTGCAACAAGAGCAGCCTCTCCCTTGGAGGAGAAGATGCTCCTTGACACTAATGGTTTCATTATGACTGCAATGGAAGCTGTTTTACGGCCTTTGCATATATCTGTGTCGATTCTTACAATTAAGTATGAAGGGCCCGGGCCATCGCATCCATATAGCTTTGAACGGCGCGCTGACTCACTTCCGCTTCCGGAACGAAATTTTCAAAAAGGTGAAAGCATCCGGGATACAGATGAAATTCGACATCTACACCTGCTTGTGCAAGCCGCGTTACATATTCGATCGTCTCAT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 21930-21434 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMB01000013.1 Paenibacillus elgii NBRC 100335 PEL01S_CON000013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 21929 30 96.7 39 .........T.................... CATATCGTTTGTTCGTTCCTGGAACAATCGATCGTTCGG 21860 30 100.0 38 .............................. TCTGTCACTGTTTGACCAGGATAACCTTGAGCAGCATC 21792 30 100.0 36 .............................. GCCGTAGTCTGCGCTTGGTTCCCGATCTGCACTGCA 21726 30 100.0 36 .............................. TCGGTAAATTCCGGTAGCCGGCGTTTTTGCTATTAT 21660 30 100.0 38 .............................. TGTTCCGTATAATGGCACTGGAATACAAAGTATGTGTC 21592 28 86.7 35 .........A.......G..--........ TAGCGCAATATCCGGACTTTCCGCCGGAGATGAAC 21529 30 93.3 36 .........A.......G............ ATAGAATTTTTCTCATTCTTCGATGCACTCCCTGTA 21463 30 96.7 0 .................G............ | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 96.7 37 GTTTAGAACGTACCTATAAGGAATTGAAAC # Left flank : AGAAATTATGTCCAAGCTTCTGCTGCTGGCGGAAGACAGCAAAATTAAGGATCCAAGCATCCTGGCGATGCTATAGCATGCAGAAGAGCGCCCGACAAACGAAGGGCGCTCTTTGTGTATGCGAGAGAATAGTGATTAGAGAGCTCACTCCAGTTACAGGCAACTCGTTTTCCTTACCTTTTGCACCGATTGTCTAATTGTCAAGGATCAAAAAAGATGCGAATTATTTTAGAGGTTTGTGGTAAGGTAGAAGTGCTACGGTTTTTCCACCGATTGTATTATTGGAAACTGGTCTGTTGTTGTGATCATCTCGGCCTTGGAAAAAGGTGGACGAAGGCATATAATTTAACTGTGCTGTTTTGTCGTCGACCCCCAATGCTGCAAAAATACCGGGGGATCGACGACAACGATAGTAGCGTGGTAGAAGGGATTATGGTATTTTCTGGGTGATTTATAATTCTGGGATATGTAGAAATGGCTTAACGACGGGAGTTTGATGG # Right flank : AAGGGCTCCGGTACGATTTTCGGCTATATGGTGAGCATGGCGAGAATTTGCATAGCAGGCCCCTTTAAATCAGCGGTACAAAGAAAGCCTCTCGAGACGATCTCGAGAGGCTTTGTGGCGATTAGAACATAATCGAATGTCTGCGGTCTTGGATGCGTTCGCCGGAACGTGTTCGTTCGACATAGTGGAGCTTATTGTTCGTCATCAGTAAAATCGTAGAGCTTCTCGTTCCATAATGATCGCTCCGAATGTAGATCGAAGAGAGGAGACGCTCCCACTGTAGCGGCACACCGGTGGCAGGCAGCGCATTGTCCGGTGCCGGCTCCGCGTCCTCAAGCAGTTCAAACAACGCATCGACACGGTCTTCCCGAACGTCCTCGAGCTGCGATTCCAGTTCTTTCTTCCCTTTCGTTACCTTCGGCCAATCGGTGTCCAGCAGATGGTTGCTTACGCCGTACACACCGGGTTGGAGCTTTCGAATCTCATGACCTATGTTCGAA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 3 29334-28306 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMB01000013.1 Paenibacillus elgii NBRC 100335 PEL01S_CON000013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 29333 30 96.7 35 ....A......................... TCAGTATGACGCTCCTTTAGAACCACTATATGCTG 29268 30 100.0 37 .............................. ATTCTTCAGCTGATATTAAATCGTTGACAAACATGTA 29201 30 100.0 39 .............................. CTACGATCAAGACAAGCCCAACACGAACAAGGTTTCAGT 29132 30 100.0 35 .............................. TTCCCCTCCTCTCAAGGCTAGGAGAGCGGCCCGGC 29067 30 100.0 37 .............................. CCTCCCGGATCGCCGCCGGGATTCCCTCCCGGATCAC 29000 30 100.0 38 .............................. GGATACCGGAGAAGGTCAATAAGCCTTCTCCCCACTAT 28932 30 100.0 35 .............................. CCGTCATTCTCGCCTAAAGCAAGCCGGCTGGTCAG 28867 30 96.7 35 .............T................ TATGCGAACGTCTTTGTATTCGGGTCATACACTGA 28802 30 100.0 38 .............................. CGACGCCGGCCAGCGGTCCAAGTACGTTCTTGATCGTC 28734 30 96.7 36 .............................T ACCGAAGTTCCTGCGTAAACGTCGTTGACAGTGGAT 28668 30 96.7 36 .........T.................... CCTTTATATCGGAGCTAGGTGACCCGAAATAAACGG 28602 30 96.7 35 .........T.................... GCAAATACGATCGTACAATATAAGTTCGTTACACC 28537 30 93.3 36 ....A............A............ CTCCTTATGCACGAACGTCTTCGTATTCGGATCGTA 28471 30 96.7 38 .........A.................... TGTGCCTAGACTGCTTTTCGTAGATTCAGGAGTGCCAA 28403 30 96.7 38 ....A......................... TACCACGAAATTGAAGGTGCGTGTACATGATTCAGAAA 28335 30 93.3 0 ....A........................A | ========== ====== ====== ====== ============================== ======================================= ================== 16 30 97.7 37 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : TTGCGATCCCACAGGCTTGGGTAATTTCCTCGACCGTAACGTTATCGAAGCCTTTTTCTTTAAACAGCTTTATGGCATGTGTGAAAATGCGCTCTTTCAGTTCTTGCTTTCGGGATGCTCTAAGCATCGGGGAGGGTCACCGCCTTTTTTTAAAAAAAATGACTACGGTCATAAAATGACTTTGGTCATGATTTTACTCCTATTTTTGGTATTGTACAAGTATCAAAAAAGTTACGAAGTATTCAAAGCTTGTGGTAAGGTAGAAGTGCGAGGCATTTTTGCAATGATTGCACATTAAATTCAGGTGACTATGGGTTGGAAAAAGGTGGACAAAGGCTTATAATTTAACTACGCTGCTTGTCGTCGACCCCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAAGGATAGTCGGGCGGCAAAAGGGATTACGGTGTTTGCTGGACTCGATACGTAATTCTTGAATATGTAGAAATGGCTTATTGGCGGGATTTTTATGG # Right flank : AGATTGGGTGAAGAAGATCGGCCGACACCGACCTTCGATTTGACCGTACCTTCAACGCGTTTGGAAGAATATTTAACGAAGAACCTAGACTGCTCGCTCGAAAGTTCGGTTAGCTATTTCAGCATGTAATGATGATTTGCAGTTCTGGTGATGATTCCGGTTTCTTTCGAATAGACCATGCGGAGATCCTAAGATGCAACCAGTCCAATAATGTGAATTAGCCTGTACATATAAAATTTGATTATATGTATTGCCGCCAATTGGCGGCTTTTTACTGCTAGAGTCCCGGCATATGTGGAGTGAAACCGGGACATACGTACTAGGTCGGGTAGAATAGGTAGTTGTCTGTTCGTATTTTCACAAAAAAAGGGGAACAAAAAGAAACAGCATGATATAATGACACTATCATTTGTTGCCCTCGCAGGGTGACAAAGTTTTGCTGACAGGAGGCGAAGGGGTGCAGATCTATTTCAGAGTCAAAGCGGCCGGCAAAAGGCGTC # Questionable array : NO Score: 8.84 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //