Array 1 87152-88366 **** Predicted by CRISPRDetect 2.4 *** >NC_011027.1 Chlorobaculum parvum NCIB 8327, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 87152 35 85.7 40 .CTT.G......A...................... ACGTGTACCATGCAAAGGCCCAGGCGACGAACTATGACTT 87227 35 97.1 40 ...............G................... AGAAACCAGTACTTGAATCACTCAAACGATACGCAAAGTT 87302 35 100.0 36 ................................... GTTGCAGGCGTGGCGAGACGGCTTTTCCGTCGAAGG 87373 35 97.1 38 ............A...................... CATTGGATACGTAACTATCAGGGGGCGGGAATACCGAT 87446 35 100.0 39 ................................... GTATGCTGATGTGTCGCTGCCGGAGCTTCAGAGGGAGCT 87520 35 100.0 41 ................................... TTTCGGGTTTGTGATTCCGTCAGGTACGGTGTCAGAGGACG 87596 35 100.0 40 ................................... CAGAATGCTATCGATAGCATCGATAGATAGCGTCCGACAA 87671 35 100.0 39 ................................... CGTCGGTGATGATGGAACGCAGTATTGGCCAATCTTCAT 87745 35 100.0 37 ................................... CCGTATGTCAATTACCGCATCCACGTGGTCGGCACTG 87817 35 100.0 35 ................................... CGTGGTATTTCGAACTGACGAGGCGGCTCGAAAGG 87887 35 100.0 39 ................................... TATCGAGATCGGCACGCTCATGGGCGGCCTGACGAAAGG 87961 35 100.0 41 ................................... CCCTTGCCTAACCCTGACGATTGTCCGGTAATTCCAGTCAT 88037 35 100.0 40 ................................... CCCCTGTCTGCAGAACGCCGAATATCGTCTGCATTTGGCT 88112 35 91.4 38 .CT.T.............................. AATGAAAAAAATGAACATCGCCACTCTCTTTTTCCTGC 88185 35 91.4 38 .CT.T.............................. CACTCCACCATATCCGAACGCACCAAACCACCCGGATA 88258 35 100.0 39 ................................... CGCCTACGCATTTCGCCTCGCGCTTATATCGGTAGGCAT 88332 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 17 35 97.8 39 GTCGCAATACGCTAAAGCGTGCAATGAAATGAAAT # Left flank : AAAATGGATGCTTCATGACGCTGCGCTTTATTCAGAACGACAGAATCATCTGTCCACGTTATTGCTGAAACTGCGGGTTTCGGCAATTGGCTGGGAGCGACAGCTCCATGAGCTTGTAATTCCATTTCTAAAACAACTATGCATCATCATCGGGCTTGTGGCATGTCAGTCCGTCATTCCCGCGAAAGCGGGAATCCATGTGCTTTTTCCAGATTCTGGATTCCCGCCTGCGCGGCAATGACGAGGATACGGCATTTTATTGATGCATGAATGATCTGTAATTGTAATAAGGCACTCATTAGTGTGGCCTACGTCATTTCTTGAAAAGACTTTTCGGAATGACTATAGGCGCATTTCCCACCCCAAATCCTCCTCTTCAAACAACTCGTTAGTAGAACGAGATGCTCTCCATCATTGGGCAGAACGGGTTCATTCTGAATTGCTTGCCCTTTAACTCCGGCAGATTTAATAGTTCTTGGCTTTTTTCGCTGTTCGAAGAT # Right flank : TAGTCCCCTTGAAAATCCTTGACTGGTGCGGCTTTACGGAGCCTTGTGCGTAGGATCTCCGATTTTCAGCGATGCCAATGAACATGAGGCTTGTTATCACATATTTTTAACAGCCGTATCTCCAATTATTATCGTTGGTTAAGTAGTCTGCGGACAATCAGCCAGCCGCTTATCTGCCATATCCTTTTACTGAATAACAACTTAAGGCGCTTTTCAGGTGTTTTCAGCGATGCTCAGAATTATCCTCCGCATTATCTGCTGACCCGGTATGGCTCGTACACCGGGCGCTTCCCTTCAAGGACCTCCTTGAGCTTGTGCACCTGGTGTTCCATGTGCCGCCGGATGTTCATCGCCTTTCCGGTTTCCTGATCGACGGCATTTTCCCACATCCGCCGCTCGAAAACGGTCAGAAACGTTTTCCTTGCCTTGTCTGTCAAAAAACAACCGAGTCTGTCTTTATGATAATAAAAATCCTTGTTCCTCAGAATTCCCTTGTTGAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATACGCTAAAGCGTGCAATGAAATGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //