Array 1 14430-15458 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEBTO010000035.1 Campylobacter peloridis strain SC0630 Contig_35_56.4997, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 14430 36 100.0 30 .................................... GAAAAAGTAGATATGGTAACTGCTCAAGTA 14496 36 100.0 30 .................................... TAGATAGCTTTAATTTTGAAAGTGGCTTAG 14562 36 100.0 30 .................................... TTGATACCTTTTTTAAAGAAAAATAGATAT 14628 36 100.0 30 .................................... CGTGATAATATGAGTAAAGCCATTATTACA 14694 36 100.0 30 .................................... ACTGGTGCAAAAGGTGCAAAAGGCGACACT 14760 36 100.0 30 .................................... ACTTAATACAAAGTAGGATTAATGGTGGAA 14826 36 100.0 30 .................................... AAAGCTTGCTCTTGACTTATAATTCCAGTA 14892 36 100.0 31 .................................... TGCGAGCTCTAGCAGAGCGTTTCCTACGTCG 14959 36 100.0 30 .................................... AATGGTAGAATTTATAGATATGATACACCT 15025 36 100.0 31 .................................... ACAAGTTCCTATGCAAGCATCGACTATTAAT 15092 36 100.0 30 .................................... AATAATCTTAAAAGATGGTTTTGTTATAAA 15158 36 100.0 30 .................................... GTTTAAACAACAATAAATATAGATAACAAT 15224 36 100.0 30 .................................... GCATAAAGTAGAGCCTCATTTAGTGTATTT 15290 36 100.0 30 .................................... TGCTTTATTGCATCTTGTTTGTTTCTATAA 15356 36 100.0 31 .................................... TTGAATAAGTTTTTAAACGATTACATTAAAA 15423 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : TGGAACGATAGCAGCATTGATTCCTGCGTTTTTTATTTTGCGGTATTTAGGCATAGGAACTTTGATTTTACTAGCAATTTTGCTTTTTTTGGTTTCTATAAAAATCATTGATCAATACGAAAAGCAAACAGGCAAACATGATGATAAACACATTGTTATAGATGAAGTTGTTGGGGTATTTTTAGCCTTAGCAATTTGCGGGCAAAGTGTTTTTACTTTTTTGCTTTCTTTTGTTTTATTTAGATTTTTTGATATCACAAAACCATCTATCATCGGTAAAATTGATAAAAAAACCAAAGGTGGTTTGGGTGTAATGCTAGATGATGTTTTAGCAGGAATTTTTGCAGGATTATTTAGTGCAGTAATTTATGGAATTTTACTTAAATTTGATCTTTTATGGTTTGATATAAGCATTATGGAGATATTTTAATTTTATATTTTCACTTTAATTTTTACGACAAAATACAAAAAAAGGGTAACTCATAGTAATAGTAGAGTCT # Right flank : TACACTTTTACCAAATAAAGAAAATTAGATGTTTTTTTGGGTAAAGATATCTAAAATTATGTTATAATTTCGCCAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTTATCCACGCAGGGTTACAATCCCATTAAAACCATTAAAATTCAAATAAACTAGGTTGTATAAACTTAGTTTTTTTCCTTTCTTTATTTGTTTTTTCATTACTATATTTAAAATCTTGAGTTTTTTCATCATATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCACCTAATAAAATTTGCATATTATCAAATTGTTTTTCTGTTATAGTTAAAACCCTTATATTTCCATAAGGTGGTAAAATTTTTTCTACAGATTTTATCGTTGTTTTAGCTGAAATTAATCCTTTGCAAATTTTTACATATACACTAAATTGCATCATAAAAAATCCAAGTTTTATTAATGAAGTTCTAAATTTATTTGCATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //