Array 1 38-249 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCR010000017.1 Corynebacterium ulcerans strain 06-19 NODE_79_length_286_cov_105.327044, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 38 29 100.0 32 ............................. TTTGGGTGGAATTGTCAGAGCACGCGGCGAGC 99 29 100.0 32 ............................. CTGCGAGTCGGTGTAGGTCAGGGTTCAAAATC 160 29 100.0 32 ............................. ACGGACCTTGTTTTATCTGACGGCTGGCACTG 221 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GGAACTACCTCCGCGTACGCGGAGAAAAG # Left flank : AAAAGCTGCCGCGCATCCCTCACCGGATCGGGGGTTGG # Right flank : CTGCCGCGCATCCCTCACCGGATCGGGGGTTGGGAAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCGTACGCGGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [21.7-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 78532-79309 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCR010000006.1 Corynebacterium ulcerans strain 06-19 NODE_6_length_159227_cov_82.433136, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================ ================== 78532 36 100.0 35 .................................... GGTATAAGCACGCGGGCTTGCTGGGCTGACCAGAA 78603 36 100.0 36 .................................... ATCTGCTAGGGGGAACCACTCGAGAATTTGCTTGTA 78675 36 100.0 35 .................................... TATTTCACCTGTGACACTCACTTTTTCTCCTTTTC 78746 36 100.0 60 .................................... CTAGGAGCAGAAGACACCGACTACGTCAGAGCAGTAACCCGAAAAACACCCTCATCGCAG 78842 36 100.0 38 .................................... AGGCGGACTTCGCGCTGGTGGAGGTCTACATCGCGGTA 78916 36 100.0 36 .................................... GTTCAGGAGATGAAAACGTGGACGACTGAGCAGCTG 78988 36 100.0 35 .................................... TTCGGTGGGGATGAGCAAGCTTTTCCGGTGACACC 79059 36 100.0 35 .................................... TTCGGTGGGGATGAGCAAGCTTTTCCGGTGACACC 79130 36 100.0 35 .................................... TTCGGTGGGGATGAGCAAGCTTTTCCGGTGACACC 79201 36 100.0 37 .................................... TTCATTCGTGAAGATGTGCGCTTTTTAATGCGCGTGG 79274 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================ ================== 11 36 100.0 38 GTCGCTGCGGCTTCGGTCGCAGCCTTTCATTGAGGT # Left flank : AAATACGATGAGGCGGGATGATGTTCGTCGTACGATTATCGCCTACGATATTGCCCACGATAGACGTCGAAATAAGCTAGCTAAGATCTTGCAAAAATATGGCGACAGGATCCAATACAGCGTTTTTGTTGTCGATTGCAGCCCTGCAAAGCTGCTTCGGCTAAAGGATGAAATAAAACTCAGTATTAATGCTGAGGAAGATTCCGTTTTATATTGCGATCTTGGACTGCTGTCGAAAGTAGACACCACATTTACTTACGAAGGCAGAAAACAAGAGATCACTGACAATGAATTTCTGATTATCTAGCCGCAAGAAACTACCGCGAAGACCCTGCGGACTTTAAAAATCCCGGGAGGTCTTCGCGGTCACGTTTTCCCTTGTCATTGTGGTTTTCATAGAGCAACAACGATCACCCCTTTGGAAAATAACTTCATAAAAGTCGAGAACTTCGCAATAAAAGGGCAAATACCGAGGCTAAGTCAGTTAAAATGAGGGGGCT # Right flank : TGACGCTGTAGGGCTGCGCGGTCCTCATCGGACGCGCTGGTGCTCGAGATCTGCGCAATGGCGCGGGCTGTTGCTAAGCTCATAGCCGTGCTTTCTCCCCAGATGGTACTGGGTGATAAGCGAGCGTCAGGTAGTTGGAGCTGCCTGGCGCTCATTCATTTTTCAATATCGCCACACACCCCTACGGAGCATGTACGCACTTCGGATACACGACTCGCATTTGCGTTGTTCAACGCCACAGAACGATCTATCCAGTCCATCGTCTAGGGCCAGCAGCTAGTACTGCTTTATTTCCGTAGACTGCCCAATATGAAAGAGAAAAAACTATCGTCCTTAGTATTCGGAAACGTTATCCTTGAATCTCAGATTTTGGGGACAACCATCCGAATATACGCTGATGACATGCGGTCTTATTCTTTTCGACCTAGCCCTTATGCCTCCCTCTCCGTCCCCTTAAACGAGTTAAAAGGGCAGCTTCAGCCTGACCACGCCGAAGCTCT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCGGCTTCGGTCGCAGCCTTTCATTGAGGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 158467-159227 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCR010000006.1 Corynebacterium ulcerans strain 06-19 NODE_6_length_159227_cov_82.433136, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 158467 29 100.0 32 ............................. GAGTGTGCTCGTGTTCGGGCCTCGGATGTTCA 158528 29 100.0 32 ............................. CGCGCAATCGAAAAGAATAAGGCCAAGGGCTG 158589 29 100.0 32 ............................. GAGGTGTAAAGGGCGAGGGGCGATTTTCCTTC 158650 29 100.0 32 ............................. CGATAAGTGGGAAAGCGCGAAGGGCAATCCGC 158711 29 100.0 32 ............................. CAATCAAAAGGGTGATCTTGAAATCGTTGCTT 158772 29 100.0 32 ............................. GATCATCCGTGGCCCTGCTGGGCCAGTCAGTG 158833 29 100.0 32 ............................. CTAGGCGCTTTCGCAGAGGGCTTTAGCCTCAA 158894 29 100.0 32 ............................. TTTTGAGCAAATGGCGTCCCTCATCCCACCGA 158955 29 100.0 32 ............................. GCTCGCCGCGTGCTCTGACAATTCCACCCAAA 159016 29 100.0 32 ............................. CAACCCCCGATCCGGTGAGGGATGCGCGGCAG 159077 29 100.0 32 ............................. CAACCCCCGATCCGGTGAGGGATGCGCGGCAG 159138 29 100.0 32 ............................. CAGTGCCAGCCGTCAGATAAAACAAGGTCCGT 159199 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 100.0 32 CTTTTCTCCGCGTACGCGGAGGTAGTTCC # Left flank : ACATTATGATGGAGATCCTCACTCCACATCTCCCCGAGCGTACCGACGACCGCCTCATCGGCGGAAGAAACCACGAAGTCCCAGGGCACACACAATATGGTGGTAAATAAATGTTTGCGGTCATCCAAGGACATAACCTTCCGAACCACCTCAACGGCTACCTCAGTCGCTTCCTTTCAGAAGTAGACGCAGGTCTTTATGTAGGAGTTCTATCCAGAGCCGTCATGGAAAACCTTTGGGAAAAATGCCAATCCGTAGACCTAGCAGGATCTCTTACTCTGATTCACCCGCAATATGATGCTGAGCAAGGGTTTAGAATCCGCACAACAGGAAAACAACGGCGCCCCGTCGTTGATCTTGATGGTCTTTTCCTCTCTGCTCGTGGTCTAATAGAAGACGTGCGTTTTGCTGACCCCCTGGATGAAGCCGATGCAATTATTCCAGACGAAGTTTTGGAGGATTTTTGCCCAGAGAGTGAGTAAACGCGCAGGTTATTTAGT # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 38-1042 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCR010000016.1 Corynebacterium ulcerans strain 06-19 NODE_17_length_1042_cov_69.789071, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 38 29 100.0 32 ............................. CAGTGCCAGCCGTCAGATAAAACAAGGTCCGT 99 29 100.0 32 ............................. ATCCATTAGTTCCTCGGAGATCAGCAGCTTTG 160 29 100.0 32 ............................. ACGCTGCGCAAAGCGGTTGATGACCTTGAGAG 221 29 100.0 32 ............................. ATCACGATTCAAAACCCGAAAAACCCCACACC 282 29 100.0 32 ............................. ACGACGAGGCTTTGTGGCAGAAGCTTCGCGGG 343 29 100.0 32 ............................. CCGCTGCTGAATTTTCTTCTCGGTGGCGGGCT 404 29 100.0 32 ............................. CATGAGCGTTTGGTTTTTGAGGGGTGGAAGTC 465 29 100.0 32 ............................. GGGGGAAACACACGCCAGGTGCAGTTACTTGC 526 29 100.0 32 ............................. GCCCTTTGGGGTGCCGCCCATGATGGCGCGTT 587 29 100.0 32 ............................. CTGCGTGATCAGATTGAAAAGGGCACGGCGTT 648 29 100.0 32 ............................. TAGGTTTTTGTATGGTTTTATGGTAGGTCATT 709 29 100.0 32 ............................. CTCCTTGCAATCAGCGCCCCCTACGACAAAGC 770 29 100.0 32 ............................. CAATCATTGTCCGCAACGTCGTGACAAACGAA 831 29 100.0 32 ............................. GAGATTAGCGCCCCGGCTCAGATGGCCGGGTG 892 29 100.0 32 ............................. TGCGGTTGATATGATCGCTGAGAATGGTGTGC 953 29 100.0 32 ............................. AATGTTGTCGCTGAGGTTGAGGCGGGACGTGG 1014 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 100.0 32 CTTTTCTCCGCGTACGCGGAGGTAGTTCC # Left flank : GTTCCCAACCCCCGATCCGGTGAGGGATGCGCGGCAGC # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [18.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 433-38 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCR010000007.1 Corynebacterium ulcerans strain 06-19 NODE_7_length_146956_cov_83.091726, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 432 29 96.6 32 ..............A.............. TTATCGCGCAGATTGTGGAAGAAGCCGAGAAG 371 29 96.6 32 ..............A.............. GGATGCACCTTTGGTTCATTTTCATGCTTTGC 310 29 96.6 32 ..............A.............. TCATTTTTGGCTTTGATGAAGCTGGCGCGCTC 249 29 100.0 32 ............................. CCACGTCCCGCCTCAACCTCAGCGACAACATT 188 29 100.0 32 ............................. GCACACCATTCTCAGCGATCATATCAACCGCA 127 29 100.0 32 ............................. CCACGTCCCGCCTCAACCTCAGCGACAACATT 66 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GGAACTACCTCCGCGTACGCGGAGAAAAG # Left flank : CATAGGCTGGGAAACAAGCAGTCGATAAACGCTCAAAACTAAAAGAATGTTGGATGGCATCTACCGAAATAGCGCTGACCAACATTCAAAACGGAGAAGGTTTACTTCTTTTTCTTGAGTGACAGAACAAAAAGCACGATTATGATCACAAGTAAGGTAGGGATCAGAAAAGCGATACTAAAGCTGCCAATTATAGTCAGAAATTCTACCATCTACCCTCCTAGGGCTTAATCGTAATGCAAGCCCAGTTTCCTGGACCCGCACCTTGCACGTGCGCTCGTCCACAGACCCGTGAATTAGGGTCAAAATTCCTATTTACCTGAAAAGTATGGGTGGTACGGTACAGCGCGCAATTATGTCCCGAGGTCATGGCCTTGCTTTGGCCATTCTCCCGATATGTGACCTCAAATTTATCGACACAGGCATTCGTCAACTGCCCTCCCACATTATAAGCCATAGCGATGGAATTAACGTGCGTCCCCTTCCCGTTTACATATAGG # Right flank : GGCACACCATTCTCAGCGATCATATCAACCGCAGGAAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCGTACGCGGAGAAAAG # Alternate repeat : GGAACTACCTCCGCATACGCGGAGAAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 5687-3521 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCR010000001.1 Corynebacterium ulcerans strain 06-19 NODE_1_length_504952_cov_73.586274, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5686 29 96.6 32 ............................G AGTTTGTGGGGGCTGCGTTTCGTGAGGCCCCT 5625 29 100.0 32 ............................. TTCATCCGAGGGGGCTCACCATCGCGCATGAA 5564 29 100.0 32 ............................. GGGCCTACGGCTTTGCGTCTGGCCCAGATGAT 5503 29 100.0 33 ............................. CTCCCTGCTCTACGACATCGGGCATATCCCCGG 5441 29 100.0 32 ............................. TGCTCGCTCGTGGCCACCCTTACCGCGCACTC 5380 29 100.0 32 ............................. GAGCAGCCACGGTTTATATCTCGCTCCGATGG 5319 29 100.0 32 ............................. AAGGTTTTTCACGGTTTCGGAATCCGCCATTT 5258 29 100.0 32 ............................. GACTCCGCATCCTCCGGAGCAGGCAATGCAGC 5197 29 100.0 32 ............................. TTCACCATTCTGATGCCGGTTTTCGCGGTTTG 5136 29 100.0 32 ............................. AGTGTTTTCTAGGATGAAAATGACCTACCATA 5075 29 100.0 32 ............................. CGCTGCGCTCGGCTACAATGCTGGCGCTAGCG 5014 29 100.0 32 ............................. GCCCCTGACTATCTCAGGGCATGGAAGGCATG 4953 29 100.0 32 ............................. AAAGCTCCAGCCAAGAAAGGTATGCCAGTAGA 4892 29 100.0 32 ............................. AGGTTCCCAAATCTTTTATTGTTCCTGATTTA 4831 29 100.0 32 ............................. CCCATGCACAGTGACGGGGTGGATAAAAAAGA 4770 29 100.0 32 ............................. TCGTGTGTTTCTTTGCGGTTGTCCAAGAAAAT 4709 29 100.0 32 ............................. AGAATCTATTCCCCTTCTTGGGCGAAGTTTGT 4648 29 100.0 32 ............................. ATCTGGGGCAACTGCTTTGATGTGGAAATCAG 4587 29 100.0 32 ............................. TCCCCGTGAGATCGAGCGAGCTTGTTTAAAAA 4526 29 100.0 32 ............................. CGCCCAACCCCACTCCTCACGGACCGTGGGGC 4465 29 100.0 32 ............................. ACAAAACATAACCCGCATCACACAGGCGGGAA 4404 29 100.0 32 ............................. TTTGAAATAAGCTGCGCAGTGCGTTCACCATC 4343 29 100.0 32 ............................. AAGTTCGAGCAGTTCCTCGTCCTTGCCCCGAT 4282 29 100.0 32 ............................. TGCGGATGAGGCCATAAAAAAGTGGCGAGAGC 4221 29 100.0 32 ............................. TCGCTGAGCGGGTGAAATCCGGTGGCACGCTG 4160 29 100.0 32 ............................. CATCACCCCCGAACTCGCACAATACGCATTCG 4099 29 100.0 32 ............................. CTGCAAAACCCAACCAGCAACCGCCGCCAGTG 4038 29 100.0 32 ............................. CCTGCTCGGGCACAAAGAATATTCCGGCGCTG 3977 29 100.0 32 ............................. AGCAAATTAGGGGCAATCCGGGACCTCTACCC 3916 29 100.0 32 ............................. GATTTATTTGGTGAGGGAGTGATGCGCAGTGA 3855 29 100.0 32 ............................. ATTGAGGCTTATGGTAGGCATCTGACTGCGGG 3794 29 100.0 32 ............................. TCTCTACACATGGTGTAACGGGCCAATGCACA 3733 29 100.0 32 ............................. ACCCGGTGCGTGGGCAAAACCCCGCCCCGTCG 3672 29 100.0 32 ............................. CTACAAACTTTTCTGCAAACGCCACCTCCTCA 3611 29 100.0 32 ............................. ATCATTGCCCAGCTCACGAGCACGCTCGGCGG 3550 29 82.8 0 ....................A...AGC.T | A [3524] ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.4 32 CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Left flank : CGAACACCGCCAGCCCGAGAAACCCCCGAAACTGCGACTGCTCAACATCAAGGATCTGCACGCCATTAGCAGCTAACACTCGGAAAGCTGCTGCCGACACTCCCTGTCGATCCTGGCCTGAAATAGTAATAACAGCCGGGGTCAGCTCTGGGCGAAGGCTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTCGCACGAAGCCTTTCAAATCCTCCCAGTGCTCCCCTATTTAGGAATGACGGGCTCCGCATCAACGAATGCGCACTTGCTCCCCATCCTATGGGGCAAAGTACCTTTCCTTCGGTCTTGTGGTTTTACACCTTCTTGCGGATCCTGCGGGGGTGTGCAATAGTCTTTCCCGCTTTTGTCATGGTCTAATAAGGAAGGCTAGTTTTCGCACCGATTGTATGGAGTTAATGTGCTGATTCCAGACGCAGTTTGGACTGTTTTTGACTTCTTTGGTGATTAAACACGCAGGTAAGTTAGT # Right flank : ACAAAAACCTATCATCAGCCTTGATGAACTTTTTAGACGTCGAAGACCACAGAAGAAAACAACAAGTTGATCCGGTTTTCCAGCCACTGGCAAGACCTCAGGAGTAATTCACCACGTTGCTATCGCGACAGCAATCAAGAGGAAGAGCGAAGACATGAATACGTACCAGAAAATAAAGGAAAAGACAGGAGGAAAAATCTATCTCGGAGTAGGACTACAACCAGGCAATCAAGACGAAATAGCTATCGAAGCCTGCTACATAGAAGCACTTATTGACTATGGCTATCTCGATGTAGAACTAAAGAAAGAATTTCTAAAATTATGGCTCACTGATGATATGTACGATGATCTGAGCGATCTTGACTCAATAGAACTGAAAACATATCGTAACCTACTAAAATATGCAGGCATGCAGCCTCGTGTAGATACGTCTGTCTTCCGCCCTGAGCCCGCATAAAACTACATCGTTTAATCAATACATCAGTAACAAGTTTTCTATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //