Array 1 21627-24224 **** Predicted by CRISPRDetect 2.4 *** >NZ_VODK01000052.1 Enterococcus avium strain L8 L8_4849.1__paired__trimmed__paired__contig_52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================================================================== ================== 21627 32 100.0 34 ................................ TACGGATCATCAACGTGGCGTAAGCTAAGGCAAA 21693 32 100.0 34 ................................ TAAATACTTATCTTCCACTCTTTCATAAGTTTCT 21759 32 100.0 34 ................................ TTTACAGACTGTCTAGCAGATAATAAAATAACGA 21825 32 100.0 33 ................................ AGAAGCTTTAAATATTAATGGTAAGTTTTTAGA 21890 32 100.0 35 ................................ ATTCGTGTTGCTACGAGGTAAACTTGTCTGAGTGT 21957 32 100.0 33 ................................ AAATCGATATCTATAAGGAGCTGATAACTTGTT 22022 32 100.0 35 ................................ ATAGCCCGTCCCGCGTTACTCGAAAATCTGGAGAA 22089 32 100.0 34 ................................ TAATTGGAGGCTCTCCTGTTCGATCAGCCCTGCG 22155 32 100.0 34 ................................ TATAATCAACAAGCAATTGAAAGGCCGAAGTTTT 22221 32 100.0 34 ................................ ACTAAACCCGTTAACAGTTTTAAACAAAGCTGGA 22287 32 100.0 33 ................................ GAATCAAACGCCGAAAGAACAAATTATCAGTGA 22352 32 100.0 34 ................................ AATAGACTGATTTAGAATATCTGACAGATCAGTG 22418 32 100.0 33 ................................ ATCTTTATACCTTTTCTGTTTTTATTTGCTTCG 22483 32 100.0 36 ................................ TACTTGGGCAACAGGCCAAGTGATTCCTCAATGGGT 22551 32 100.0 34 ................................ GACCAAGTGCTATGTCGAATGAATATTATCGGTT 22617 32 100.0 34 ................................ ACTTGCTGTTTTAAACGAGATAAAAGAAGAACTT 22683 32 100.0 33 ................................ TTTGTGCAAGCGTCGGGGCGCGTGAATTGTTGA 22748 32 100.0 34 ................................ CCTAACAGTTTGTGGATGGCAGCTTATCCAAATT 22814 32 100.0 35 ................................ AATAAATCTTTTGCAAGTCCATTGTAGTCGGCAAC 22881 32 100.0 35 ................................ GTCGCAGTCCTTGCAGTAGCAAACCATCGCTCAGC 22948 32 100.0 34 ................................ ATCTTGATGGTCTTGTATGATCCCCATAATGTTT 23014 32 100.0 34 ................................ ATTCAAACTGGCTTGCCAAGTCAGCGTTTACCAC 23080 32 100.0 33 ................................ TATAAATGTGTAATGACTCGAAAGTGCTGCATT 23145 32 100.0 32 ................................ GCTCCATGCTTCCTGTTGCTCAGTGCTTTTAC 23209 32 100.0 34 ................................ AACCTCTTTAAGAACGTAATTAACGCCGCCAATC 23275 32 100.0 33 ................................ AGTTTTGCGTCATGAAGGACAAAGCGAAGATCA 23340 32 100.0 33 ................................ TTTTAAAACTTCATCAAAAAAACCATAATCCAT 23405 32 100.0 33 ................................ AGATTTGCAGCAGAGTATTGCCCTTCCATTTTT 23470 32 100.0 33 ................................ CACTAAGTCCCATACGGTCTCTAACTTTACCAT 23535 32 100.0 33 ................................ AGTTACCAATGCAGGAACAACGTCTGCTGCAAA 23600 32 100.0 34 ................................ AATCAAAGGAAAGCAAAAGAACTAGAGCAAAACA 23666 32 100.0 32 ................................ GTTTAGCAACTCCTACCGAAACCTTTTTTTCA 23730 32 100.0 35 ................................ ATTACTACTATAAATGAAAATGTCGGCATCTTTTT 23797 32 100.0 34 ................................ TGATTATTTGCGAAACTCTTACGAATTTTGCAAA 23863 32 100.0 34 ................................ GCAATAATCAATCCCATCAATGGGTACCCATTGC 23929 32 100.0 33 ................................ AATAGAAAGTTCTTTATCGCTTCCATGATAAGC 23994 32 100.0 37 ................................ TCGTAATGGGGAAGCGCACAGAGTACTTGGCTGTGTC 24063 32 100.0 98 ................................ GCTTTATAAAATTGAACTTACGTTCGTATGATGGTTACTCCTCCTGTAGGGAGTGGATTGAAATTATCACATAGTGCAACTGTAATTAAAATATAATT 24193 32 75.0 0 .....TC..CT..C..GG.......G...... | ========== ====== ====== ====== ================================ ================================================================================================== ================== 39 32 99.4 36 GTCGCATCTTATATAGATGCGTGGATTGAAAT # Left flank : GTGGTGATCTGGATGAATACCCGCCGTTTCTTTGGAAGTAGGTGATCTTATGATGATTTTGGTAACGTATGATGTGTCAACCCTAGAACGAAGTGGAGCAAAACGGTTAAGAAAAGTCGCTAAGATTTGTCAAGACTATGGCATCCGCGTCCAAAATTCCGTTTTCGAATGTGTAGTTGATCAGACACAATATTTTCAGATGAAAACAAAATTATTGGACATGATTGATGAAAATAAAGACTCGCTACGTATTTATCAACTCGGAAAAAATTACAAATCAAAAGTCGAACATTACGGCGTAAAAGAAACAATCAACGTGGAAGATTCTTTAATTTTCTAATGTGTGCGAACCACTAGCAAACATAAAATAGATAGGTCCTTCGCACCAGAATCTGCTGACCCTAACTATATTTATGAGAAAAAATTTATAAAAAGCAATAAAATCATCATTTAAATGGTTCTTTTTGAACATAATAAGGGGGGAAATCCCTTATTTTGCA # Right flank : TAAAAAGGAAGATGAATCGCTCGATACCGAAGGGCTAGTCGTTCTTCATGTAAGGACAAGGATTGAATCACACTATTGTTGAGTATAATAAAAAGTTGCTAGAATTAAACATAGATTTGAATTCTAGTAAAAGTGACAAAGTTTATAAAATGACCTTCTGTGCAAAACGATAACAAAATCCATCTCGATAAACACAATACTCTACGTTATAATTAAACCAACATAAGAAAAACGACATTATCGAGGTGCAGCATGGAAGTATCAAAGCCAATTATCTATGAAGTTGATTATTCAAAAGAATCTCTGAATCATTTAGAAGAAAAAATTCAGACTAAAGGAAAAAAAGAGCAAAAGGTGATGCTCAGTTATCCTACAGTTTATATCGTAAATGACAAGAAAACTCCTTCAAAGTATTCCATTTATATTGGAGAAACGAATGATATTAAGAGGCGTACTATTGAACATTTAAAGGAAATTCGTGACGATTGGAAAGAATTATC # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTATATAGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //