Array 1 43445-46596 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066016.1 Acinetobacter baumannii strain FDAARGOS_1036 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 43445 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 43505 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 43565 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 43625 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 43685 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 43745 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 43805 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 43865 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 43925 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 43985 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 44045 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 44105 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 44165 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 44225 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 44285 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 44345 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 44405 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 44465 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 44525 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 44585 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 44645 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 44705 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 44765 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 44825 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 44885 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 44945 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 45005 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 45065 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 45125 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 45185 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 45245 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 45305 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 45365 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 45425 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 45485 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 45545 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 45606 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 45666 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 45726 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 45786 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 45846 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 45906 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 45966 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 46026 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 46087 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 46147 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 46207 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 46267 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 46327 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 46387 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 46447 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 46507 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 46567 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //