Array 1 39532-40049 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUKF01000009.1 Sinimarinibacterium sp. CAU 1509 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 39532 29 100.0 32 ............................. CAGGCGTTCAATTACGTGGCCGGCGACCGCGT 39593 29 100.0 32 ............................. ACAACTCAGCCATTAGACTGACACTATTTGAA 39654 29 100.0 32 ............................. CATGGCGACAAACTGCCACGCTTGTGACCGAT 39715 29 100.0 32 ............................. ATGCTGGTTTCGACGGTGACGAGCACGTCCGC 39776 29 100.0 33 ............................. AATCGACCCCAGAACCCAGGGTTCAAAGTCGTC 39838 29 96.6 32 ............................T TGGTAGAGCGTCGCCACTGGGTAGGGGGGTGC 39899 29 100.0 32 ............................. CACTTGTGGCATGCCCCCGCAATTCGGAGAGC 39960 29 96.6 32 ....C........................ GCCCGCCATCTGCTTAGCCGACAGCATCGACG 40021 29 75.9 0 ............T........C.CCCT.T | ========== ====== ====== ====== ============================= ================================= ================== 9 29 96.6 32 GTGTTCTCCCCGCTCGCGGGGGTGATCGG # Left flank : TTGGAGCGACCTGGACGACGCGGCGCTCGGGGCATTGGTGAGGAGCAAGATTGCGCTCATCACCGATACCGCTGCCCAGCTCGACCGCGTAACGACCTTGGCGGCAGCGATGCTCTTTTGCTGCGCGGCGGCAGAGGAGAACGCCACCTCACTTGAGATGGAGGTCGCGGGACTCACGCAAGCGGGGCGGGCATTCGGCGACTGGAAAGTGGTTGCAACGCGGACCGCGCCGATGAGCGGCCTGCCGCGCACCGAACTCATCGACGTACGCAGATGCAGGGTATGCGGCTGCACGGATGACGACTGCTCGCACTGCATCGAGCGCACCGGCGAGGCGTGTTACTGGGTCGCCGACGATCTGTGCAGCGCATGCGCTGCCTCTCTTGGTGACCCGAACGGCAAACTGGCGCAAGCCTGACGACCTGCTGGCACTGCCTGCTGTGCGCGGTAGAATTCTGCACCCGGCGTTCCGCGCCACTTTTCATGGACTTGGTCTAAGT # Right flank : TAATCGCTACGGTTGGGTCTGTCCCCCAACGCGTGGAGCCAATCATGTCATCGCTTTCGTCTGTCGCCGAACCAACGCTTACTTCGGACACCAGCAGTTCGCGGCGCAAGCCCATCCCCGCGCCCGAGCAGCTTGCCCTGCAGTTTCGCGGTGGCCATCCGGACCACCCGCGAGAGGCCTGGCTTGACGACTGTGAAGGAGGCTTCACCGACAGCGGCTATTGGGAATGGGTGCGCGAGGCCCTTGAACGCTGCGGTGGCGACGTACCGGACGTTGGTGATGGTGGCAAGGCAGCGCACGACGAACAGCACTCGGCTCTCCTGGCGACACTTCGTGGTCAGTATTCGACGGCGGACTATCCGTCCGCGCTGCGATCGCTCATCGCCGAGGCCCAGGCTGAACAGCTTCGTGCCCTGCGTAAGAAGATGGCGAGCCTCGCTCCGGCGGTTCTCTCGCCGGGTGGCCTTGCGGTGTGGATCGACTGCGAGATTGCCGTGGAG # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCCCGCTCGCGGGGGTGATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 91524-90901 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUKF01000009.1 Sinimarinibacterium sp. CAU 1509 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 91523 29 100.0 32 ............................. TAGCATGTCCCTCCATCGTGCGTTGCGCCATT 91462 29 100.0 32 ............................. CGCACAGCCAGCATCGCTGTGGTCGGATGCAG 91401 29 100.0 32 ............................. ACTTTGGACGCCGAGTTGATGGTCACGCCGAT 91340 29 100.0 32 ............................. CCTCGCCTCCTTCTGGCATTCCTCACCGCCGC 91279 29 100.0 32 ............................. GCGTCGATCACCCCTTTCGCATTGCTGGACTC 91218 29 82.8 32 ...GC........AC......A....... ACGTAGTACGCGGTGTATGTATTTAAGTAGGC 91157 29 86.2 32 ....C.......A........A..G.... CTCTGCGTATTCGCACAAGCCGCTGATTGGAT 91096 29 96.6 32 ..............C.............. AGATTCAGGACGCTGACGGTGCACCTGACGAA 91035 29 89.7 32 ..............C......T.G..... TCGGTTTCCGTCATGGCGCTGATCGGCGGAGA 90974 29 72.4 16 A...A.....T..AC..A...A.G..... GATTCGCAGCGCGCAT Deletion [90930] 90929 29 82.8 0 ..T.C.........C......A..G.... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 91.9 30 GTCTTCTCCCCGTGTGCGGGGGTAATCGG # Left flank : GCGTTTACGCAGGCACTGCGCCACCGGGACTTCAATTCCGATCGCTACAGCGATCATCGCAAGCGCGGCGGGCGGATCACGGTGCTGATTGCCGGCGGACAATTCAAACCGGCGCTGGATCTGAGCACTCCATGGATCGGGAAGCTCGCTTTCCTGGGCCACGGCGATGCTGACGCTTGCATGGAGCTGGTCGAGTCACTGCCAGGCATTGGGGCCAAAGCCGCAGCCCATGGTTTCGGGCGTATGGAGTGGGTCGACGTTGAGCCGTGGGAGACCGACGGGCTCAGTGACCAAGGTCGGCCGCTGCGTTCAGTTCCGATCGAGACCTGGAAGGCTTGGGGGCACATTGTCGATGACGAGTGCGGAGTCGACATGCTGCGCTCTGCCCCGCCGTACTGGTCAGGCGCCCCTCGCCCCTGTGTCTTCCCCGCCCCGCCAGCGCGTCGGTAGCTATTGGAAGTCGGCGCAGGGCTCCGGAAGCATTGAGAAAATCCGGAAGT # Right flank : AATGGAGAGACATGCCTCGTGCCACGCCGAAACACGGACGTTTCGAGCCCGCCGGAGCGGATGCGTAGCCGGAACTTCACGGGCTCAGGTTTTGAGACAGTGGATCTGTAGGCTGGCAGCAGAGCGACGCAGCGGAGTGTTTCGAGTGATCCATGCCGGACGGTTCCGCCCAGTTGCAGCACGACTCACGATCGCGACGTCAACGCCGCGAACAACATCCTTGCCGAGGGACTGCGTTGTTTCGCAGAAATCGGCGTAGGCCCAGGAGGGGCCGAACTTATGCGCGTGGAGGGTGATACCCACCGACGGACAGCGGCGAAAGCCGCTGTACCAACGGCATCCGTCGAAACGCGAACCGTGTCAGCCCCAGACTCGCCGTGTGAGCCAGCTCCAAATCAAGGCGTTGCGAACACATGGATCAGTGAGGCTGGGGATTAGGCATGGATTCCGATCTGTCCGTCCCTCCCCGTTCGCGGGAACCTTCAGTCGGCGGTGTCGTT # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:-0.12, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCTCCCCGTGTGCGGGGGTAATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //