Array 1 148641-149396 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADBE01000112.1 Neisseria polysaccharea ATCC 43768 N_polysaccharea-1.0.1_Cont223.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 148641 32 100.0 34 ................................ GATTTCACCTCGCGCGGTGGTCAAATTTGAATCC 148707 32 100.0 33 ................................ CAAGTTGTTAAAGAGTGTTCACGCTTGCCCGTT 148772 32 100.0 35 ................................ CCTTCCCCTCTGTACAATGCGCTCCATCAGTTAAG 148839 32 100.0 34 ................................ CCAAAAAGGGTAGGCGTGTTGTAGCACCATTTTC 148905 32 100.0 33 ................................ TTATTTGCACGCCCTGCCCTTATATAACACGGC 148970 32 100.0 34 ................................ TTCCCAGTTGTCATACATCAAGTTTTGTTAGGGC 149036 32 100.0 33 ................................ TAAGCTGGTTACGCATTTGTACCACGAATATTG 149101 32 100.0 34 ................................ CCATAGGCGTTTTGAAAATATTTCAATATGGCAT 149167 32 100.0 34 ................................ AAAATGTTATCTTTGGATGACAGACACCGGAGAG 149233 32 100.0 34 ................................ CTTTTCCTTCGGCGGCGCGGGTTTTTGTACGGTT 149299 32 100.0 34 ................................ GAAGCACCGTTGCAACTGACGGGCGGCGAACCGC 149365 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 100.0 34 TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Left flank : CATGGAGGGACAAGAAAATGCTGATGTTGATAACTTATGATATTTCGCTGGAGAATACCGAAGGGCAGGCAAGGCTGCGGCGCGTAGCGAAACTGTGCCAAGACTACGGCGTGCGCGTGCAGTATTCCGTGTTCGAATGCGACATCTCACCCGACCAATGGGTAGTTTTAAAAGACAAACTTTTAAAAACCTACAACCACGAAACAGACAGCCTGCGCTTTTACCACCTGGGCAGCAAATGGCGGCGCAAAGTGGAGCATCACGGCGCAAAACCGGCGGTCGATATATTTAAGGACACGCTGATTGTGTGAATCGCCAACCTGTTGTTCCCATAAAAATGCGGCAGGGTTGGCGAATTTGGGTTGTTCTTTAACAATCAGGATATTGCAAATGTGGATATGGCGGATAAGGCTGTGCTATACTCATATTTGTGCTTTTTTCGGGAGTTTGGCGAAGTCGGGGCTGCAAAGCCTGATGTAGTAAGGCTTTCGGAAGGAGCT # Right flank : ATCTTTTTGATACCGGCCAGCGTTTTGAACTGGGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 601-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADBE01000111.1 Neisseria polysaccharea ATCC 43768 N_polysaccharea-1.0.1_Cont189.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 600 32 100.0 34 ................................ CGGATGCCCATTAGTTTCCGATGCCGAATATATG 534 32 100.0 35 ................................ AAGTAACCCCGCGTCCCGATCTCACGCCAGGAAGC 467 32 100.0 35 ................................ AATGCCCACGAACTGACGGAAGAGCAAATCATGTC 400 32 100.0 34 ................................ TAGGAAGCCGTCAACAACGCTCTCACCGTAGAAC 334 32 100.0 34 ................................ AAAATAAAAATCTTTCGGTTTCAGCCCCTACCCC 268 32 100.0 35 ................................ TTGTTGGCATTGATGGCAAGCCGTCTGATGCTCTC 201 32 100.0 34 ................................ CGTCTGGGCTACCAGGCGTTAACCAATCGCCATC 135 32 100.0 35 ................................ AGAAGCTCTATCGGCTGACTTCTCACTTTCGATTT 68 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 100.0 35 TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Left flank : CTCCTGAAACGGCGACATCGGA # Right flank : CCGAAAATGCAGCCGTACCGATCACGGACGCAAACAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [28.3-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //