Array 1 6605-6107 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPJK01000031.1 Prevotella sp. P5-64 contig31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6604 36 100.0 30 .................................... GCGGTCAAGACCATTTTGGTCAGACGGGAT 6538 36 100.0 30 .................................... TCCCTTGTTCATTAAATCATCGCAATTCTT 6472 36 100.0 30 .................................... ACCCTACTTTATTTGTTGATGACTCTTCTT 6406 36 100.0 30 .................................... TAGTGGGAGTATGTATTTGCCGATGAGTGT 6340 36 100.0 30 .................................... CTCCTCTTGAGCTTTGATTCGGTTCATAAC 6274 36 100.0 30 .................................... TTCACTCTTAATTTTACCTATTACCTCCAT 6208 36 100.0 30 .................................... CGCAACGGAGTAGTTGCCTGTGTTTGTCGC 6142 36 91.7 0 .......................G...C..A..... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.0 30 GTTGTAGAAGGCCTTATTTTGAAAGGCTATTACAAC # Left flank : AAGCGATGACAGCCGGGGTCTGGCAATCAACACCAAGCCAGCCTCGTCATCGCGTTTACTGTCAGGGCTGGATTCCGTGTTTGGAATCTGGCCCTTTGTGTTGGCGTGGGTAGCGATGGTGGCCTTCGGTTCGGTGTTGCCGTTGCGTAGGGCTGCTTCTGGTGACGCAGCGCTTGCTCCGAGTGGTATCAGTGTCATCTCCACAACGGCGTGGCTTTCAGAAACAGCTATGCCTTTTTCGCTTGCCTGCCCATACGTCATGGGCAAATGACAGGGAGTCTCCTTGGCACGCCCCGTGAAGCCAGCATAGAAATCAGGCAACATTAGCCTTGGCTCGTCATATATTCAAAAAATGCTGGGCGAAGCAAGAAAAATAGCAAAAAGGTATTGGATATACGAAAAAATGCCTATCTTTGCAGCGTTATAAACCATTAATCTCTTATTTTTATGGATAAGAATGATAGAAAAACGATTAAAAATGAGAGAAATATAACACACGA # Right flank : ACAAACTTCTCCCATCCCCAACATTTTTCGGACGAAAATCTTGCATATATGGCCAAAAAGTGCGAATATTGCATATTGATAATAAGTGGAGGAGAAGAACATGGAGAGAAACAACATATTCCGAGGTGCAGGCAAGCAGGCTACGTATGCCAAAACCGCCTACGAGCTGCTGATGACCGGCGATTGGGTAACCAACCTTGATATCGTGGTCAAAGCAGACAAGGTAGAGAAAGAGGAGGTACTAAAGAATGGCATATCAAAATGGCCCTATATCGGCGAGCTCAAAAAGGTAATCCCTCTCTTACGCAGCGCCATAGAAGATAAGGACCCAGGTTGCATAGTGATAGAGGGCAACAATCGTCGGCAGAAGATGAGATACGTGGGCGAGGACAAAGACCCGCTGAGAGAAATGCGTATGGCCAAAGCCATCAACGACATACGCCAATACTGGTATTTCTGCCAAGACGCAGCTGGACTGCTGCCCACCTCGTGGCTCGAAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGAAGGCCTTATTTTGAAAGGCTATTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.60,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 70421-69993 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPJK01000005.1 Prevotella sp. P5-64 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 70420 36 97.2 29 A................................... GAGTATATAGACGCAAAGAGCATTATCCA 70355 36 100.0 30 .................................... CAAGCACACGTTTGACCTTTATAGGTTACG 70289 36 100.0 29 .................................... CTTTCAATTCCTGAAACTGCTTTATCATC 70224 36 100.0 30 .................................... CAATGCTGCCATCAAGAAAGCCAAGGATAA 70158 36 100.0 30 .................................... GTTACCACTGCCAATACCTTTTCCGGCATA 70092 36 97.2 29 ..............C..................... TAGTAACGGCAGGCTCTAACGGAACCATA 70027 35 75.0 0 .................-....A...A.C.CGAG.T | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 95.6 30 GTTGTGGTTTGATGTAGGAAACGGACGATATACAAC # Left flank : CCTTAGGCACCGAAGACGGAGTGTCGGTGCTGAAAGGCGAGTTTGCCGGTTACAAGAATTGCCATATCTATGCCGTGGCCGACAAAAGTGGCATGATATGCCGTGTCTGCGTAGAGTTTCCTAAGATGGACAAGTGGGCCGATCTCGAAAGCTGCTACTCCAGCTATAAGGACATGCTCACCGAGAAATACGGCGAGCCCAAAGTATGTGTGGAGGAATTTCAAAACAAGTATGCAGATGACGACAACAGCCGCATGTACGAAGTTCAGTTTGACCGCTGCAAATACCATTGCACCTTTGCCTGCAAGAACGGAGATATAACCCTCGAAATAACCCATCAGAAATTCGACTGCTTCGTGCAACTCAGCTACTACGACAAAGCCAACCAGGACAAGCTGAGACAAAACATTATGGAGGATTTATAAAGTCAAGGGGGCTAAAAACAAAAAAACTCCCACCGAAGCGGGAGTATAGGTTTTACCCTTCGGCATTACTGCCTT # Right flank : GCCATTCTCCCCCAAGCGACTCCACCAGCGGATGGCAAAGCGGATGTGACGCCTCCTATATATATAATAAGGTATATATCCGCGCCCAATCCCGCCCCTTTGTGCATGGCAGAAGAAAAAATGGGGATTGAGGGATTGGGGGTCAATGTTTTTTTGTAACTTTGTAGCATCTCTGTGGCAACCCTGGGGCTTGACGGCGCAAGCAGTTATGGCTGTGGGATGGATACGGAGCGGAAAGAAATGTTATCAAGCGATATTTCTATTTATACTGATATAGTTATGACAAATTCTACAGAGAATCTCTATCAGCTTGACGGTAGAGTGCCATTGGGCAAAGCAGTCCCATTCGGTCTTCAGCATGTACTGGCCATGTTTGTCAGCAACATTGCGCCTATCATGATTCTTGCCAGCGCCATAGGGCTGGACAAATCAGTCAGTGCGGTGCTCGTACAAAACTGTATGGTAATAGCGGGTATAGGTACGCTGGTGCAGCTCTACCC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAAACGGACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //