Array 1 15623-17134 **** Predicted by CRISPRDetect 2.4 *** >NZ_OLMR01000013.1 Pseudoruminococcus massiliensis strain Marseille-P3876, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 15623 33 100.0 36 ................................. TCAGGCAGAAAAGATTGCAAAAAGCCAAAGTGACAA 15692 33 100.0 33 ................................. TAATACTGCTTGCGAGATGTATTATACAATCTT 15758 33 100.0 34 ................................. AAAATGTCAGAGAGTATCTACTCAAAAATTTTGT 15825 33 100.0 33 ................................. ATATCAAAAAAATCGAAATATTATTGCAAAAAT 15891 33 100.0 33 ................................. CTATAATCGGGTATGGTTCAATTTCCGTATGTT 15957 33 100.0 35 ................................. TTACTTATAACTATTTTTTAATAAGTGCTTTACCA 16025 33 100.0 36 ................................. AATAATATTATGTTTTTGCTGGCGTTCGGCTTCACG 16094 33 100.0 34 ................................. GGCAATAGTCAACATTTCAGCAAAATTTAAGATG 16161 33 100.0 35 ................................. ATATCCAATAGTAGCGTTTTTACATAAATCACAAA 16229 33 100.0 33 ................................. ACAAACAATCGTTCTGCCGCCAAAAGTCTTGCT 16295 33 100.0 33 ................................. CTCCTTAATTTTATATTGTTTGTATGTCATATC 16361 33 100.0 33 ................................. CTCCTTAATTTTATATTGTTTGTATGTCATATC 16427 33 100.0 35 ................................. CTAAAGGGCGAAAGACTTATCCGAACTTCTGGAGC 16495 33 100.0 34 ................................. ATACAAATACACGCTCAGTAACAATGAGCCGCCC 16562 33 100.0 34 ................................. TCTTGAGCGTGTTAAATCAGCAGGCTATACACCT 16629 33 100.0 34 ................................. AGGAAGAGCTTTTGTAAGAAAAGGCTCCTTAAGG 16696 33 100.0 34 ................................. ACCTTTACGCATACCTGTATAAAAGGCTATTGCA 16763 33 97.0 33 .....................A........... AAAGGGAAGCATAGGCAATTATGAAAGTGGAGT 16829 33 100.0 35 ................................. TATATATGCACCGGCATATACTTCGCCTACATTCA 16897 33 100.0 35 ................................. ATCGTTGCATGATAAAAGCATAATAGAGTCACCAT 16965 33 100.0 35 ................................. TCACCGGCACTATGCACACGGAGACACTCGCAGAA 17033 33 100.0 36 ................................. CTCAATAGATGTACAGCCACAAAATGTTGCATTGCA 17102 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 23 33 99.9 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : AGCAAGCTGTGCCATAAGAAAACTTTTGCCAAGTTTCGGAGCTCCTGCGAAAATATATGTTCCGGGGTAAAGCAAGCCGTCAATCAATGGCGGTTTGCTTTGATACACCGTGTTATATAACTCACGCATAGAAATCGTTTTCAAATGTGATGGATCGAGCTGTTGCAAAAATTCTTTTTGCATTTCCTCAAGATAATCATCTAAGCTCTTGCCATCTCCGTTAAAATCGGTTATACTGTTATTAGTTTGTTTTAGGATTGACTGCTCCGTATCTGCGCCAACAGATACAATCGGAGCGGTCTTTTCTTTTTCTGTCATTCTAAAACCTCCTTTAATCCGCCGAGAATATNTGGTACAGATTGACTATTGTTTGCTTATATTCCTGGGTGTATTTCGGATTTTTTGAAGACATTTTTTATTCCTCCTTTTTCTGTCTTCTATTTTATCATACTTGTCCACTTTTTTATTATATATCCACTTTAAAGCCTCCGCCCATCACG # Right flank : TTTATGTTTTTGTGACACTCACAATTAAAAATTGTGGTAGGACTGTGAAGAAATTTCTTTTGACATGTATAATCAAAAGATGTATCAACATCTACATATCCTGTTCGTACAAAGTGGTTGTTTATGAAGGTTTTGTTGTCAAGATACATATAGCACATAAGATTATTTTCTGCATCATATTTTACAGTATCATACCTCAAGAATATCTTTCGTTTACGAAATTTCTCCTGTAAAAACCTGATGGCTTTTCCTTGATATAGTGGGTTAGACTTGATACCTAACAGACGAACTACAAGTCCATTGCTAAATTCGATTTTATCAGATGCAATTACTTGCTTTACGCTAAAGAGTTCATTGCGTTTTGTTTTTGTCTTATCAATCTTTGAACCAAATTGAAGTTTTTTCATATCAACTTTCTTATCCATTCTATGTGGATCACTGAAAATATAAGGAAGCTAATTAAAAGATGAAATGTTTCCAATTTCGTCTTCTGTAAAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 320808-329611 **** Predicted by CRISPRDetect 2.4 *** >NZ_OLMR01000003.1 Pseudoruminococcus massiliensis strain Marseille-P3876, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================= ================== 320808 33 100.0 35 ................................. GCCAAGCGTGATTTGTACGGTACCACCGTCACAAT 320876 33 100.0 34 ................................. CAGTAACACAAAAAGCGGAGGCAATAGCTGTTGT 320943 33 100.0 34 ................................. TGACGAACATCATAAGCGAAGCTATAAGCCCCAG 321010 33 100.0 35 ................................. CTGTGGATTTTATTTTATCTACTTTAGTTGCTTGG 321078 33 100.0 36 ................................. ATAAGTTGCCGAATCAAAATAAATATTTCTTGCAAC 321147 33 100.0 37 ................................. CAAGTCTCCGCATCAAACATCATTTTAAAACCATAAC 321217 33 100.0 34 ................................. ATCATCACACTTAGACACAAACGAAAAATAGTCA 321284 33 100.0 34 ................................. CAAAATCACGAGCATTAAACATAATGCTTGCTTC 321351 33 100.0 35 ................................. TGCTGTTACTGTTGGTAAAGACGGCACCCTCGGCT 321419 33 100.0 36 ................................. CTATTAATTCCGAAAGGAGGTTAAATTATGATTAAG 321488 33 100.0 34 ................................. TGTGTATCATATTGGTATCCAATAAGACAATGTA 321555 33 100.0 33 ................................. CTATAATTCGTTATGGTACTTCATTTATCTTTA 321621 33 100.0 35 ................................. ATAAACTTACGAACAAATTTAATGCCAACAGACAC 321689 33 100.0 35 ................................. AAATGCACGACAGCCTTTACCTGACATTTGCACAC 321757 33 100.0 36 ................................. TGATGAGATTATCAGAAATAAAGCGTTAAAAGCAGA 321826 33 100.0 37 ................................. GCGTATCGTCACTGATACACGAGAAGTCATTTAAAGC 321896 33 100.0 34 ................................. CGCTCACGAAGCGGAAGCAGGTAAACAAAGTAGT 321963 33 100.0 34 ................................. ATGATGGGTCGCCACCATGCTCGCCACAGATACC 322030 33 100.0 35 ................................. GCACTTTGCAAGATTGGTATGCTGGTAAACATAGT 322098 33 100.0 36 ................................. TCGTTATTAGCCGTTATAATTGCAATTGGATATACA 322167 33 100.0 35 ................................. CTATATAATGCAAATTTCAATCCTTACAGGATAAT 322235 33 100.0 36 ................................. TTGAGCTTCTGAGGAATATTATCACTCTGCTTAAAC 322304 33 100.0 36 ................................. GTGCCAAGCACCGTCTTGATGTTGTTCAGGAACTGT 322373 33 100.0 35 ................................. CTTTCTGACTTGTATATATAAAATCCGCTTTGGAT 322441 33 100.0 34 ................................. TTATATAATCAAGTTAATGCCCTTTTGCACCTCG 322508 33 100.0 34 ................................. GGGTAAAAACAAAAAAGGACGGTGCTAAAAATGA 322575 33 100.0 33 ................................. TTGCATACTTTAACCTTAGAAAAACTCAATATA 322641 33 100.0 34 ................................. AATATGCCAAACATTGATATGGAGAATGAATCGG 322708 33 100.0 37 ................................. CTGTTTTGCGGCGGCAATAGAACGATTACTAATAATA 322778 33 100.0 34 ................................. CGGGCTGTAAATTGTTTCATAATGATAACCGCTA 322845 33 100.0 34 ................................. CAAAGCACAATTTGGTCATTATTATTTATACAGT 322912 33 100.0 36 ................................. GAGTATCTGTAAGCCCTAAACGATGTAATTTAAGAA 322981 33 100.0 35 ................................. AAAATGCAGAAGGTCAAGATGTTAAGTATGGTCAT 323049 33 100.0 35 ................................. ATCAGCGGAATAATCGTTGTCGTTCTGCTGGTTCG 323117 33 100.0 35 ................................. CGTGTCTGCGGCACAGCATATCATTGACACTGGTA 323185 33 100.0 35 ................................. ATTTTCAACAGGTCAGCGAAGACCACGAACGGAAA 323253 33 100.0 36 ................................. TTGTCTTGCTATGACTATACAATAACACTTTCAAGA 323322 33 100.0 37 ................................. GTGAGAGTAGAGCAGACCGAACAGGTTTGCCATACCC 323392 33 100.0 33 ................................. TATGAGGACATGAAGAAGCGTCAGATGACAAGC 323458 33 100.0 34 ................................. CTTTAGCCAATTTTATAGTTTGTATTATCAAGCT 323525 33 100.0 36 ................................. CCAGATAAGAAAATAGAAATAATTTACGGTAATACT 323594 33 100.0 35 ................................. GGTATGATTCTTGCTGTCGGTATCGGTGTTAAATT 323662 33 100.0 35 ................................. GCTTTAATCGCTCTAAGGCTCGTTGCTATGACACA 323730 33 100.0 35 ................................. CAAAGTCTGTAACAAGCGTTGATGATTATACTGCA 323798 33 100.0 37 ................................. ATCAGTATAAGCACGAATAAGTGTATTGCCTGTTTCA 323868 33 100.0 35 ................................. CGCCATAACATCACCTCCTTATCTGATTGTTGGCT 323936 33 100.0 35 ................................. TTGAGGTTGTATATTTTAATCTCAAGCTCCATACG 324004 33 100.0 34 ................................. CGTTTATATATGCAGTTGCGGCAACAGCTCGTTT 324071 33 100.0 36 ................................. CATTGTTTAAAAATCTCCTTTGTAGATAGAACCACC 324140 33 100.0 32 ................................. TCAGCACAAAAGGCGGCGAAAAAAATAACTGA 324205 33 100.0 35 ................................. GAGAGGTGGTAATTATAATCTTAATGACTATATAA 324273 33 100.0 34 ................................. TCGATTTAGTAATATAGTTTTGCTGAAATGTATC 324340 33 100.0 35 ................................. CTATCCTTCGCAGTCTTGGATTTACCATTGCCACT 324408 33 100.0 33 ................................. GGATTTAAAATAATGATTATCAACATCATTAGT 324474 33 100.0 34 ................................. ATATACTTAAACGGTATATCAAATTTAGGCGGTG 324541 33 100.0 36 ................................. GAGTTAGGAGACATTATCTCCTTCAACCTCACCACT 324610 33 100.0 35 ................................. AATAAAGAACGGAGGTGAATGTCGTGCAGACAAGA 324678 33 100.0 35 ................................. ACCGACACGGTGGCTACTCTTACCGTGGTGAACAC 324746 33 100.0 34 ................................. CTATGTTGGCGGTAAGAGTCCCTATACATGTTTG 324813 33 100.0 34 ................................. CTTTGTGTCCTCTGCCTTGTATATGTGCGGTTTG 324880 33 100.0 34 ................................. TGAATGGTATCTACTTCAATTTCAATAATGTAGA 324947 33 100.0 36 ................................. ATTGGCAGACATACAGCTCCGGTCAAAGAGGTAACT 325016 33 100.0 33 ................................. TCCGTCCTTGAGGGTTATGCGGAGTATTACAGC 325082 33 100.0 35 ................................. TGCTCGACTATTAAGCCCACTCTGACATCAAAGCT 325150 33 100.0 34 ................................. TGTCAGATAGGCTCAATCACCTCGAAGCGATTAT 325217 33 100.0 35 ................................. CCGTCATATATCCACCTGTCATTATATCTGGATAA 325285 33 100.0 34 ................................. CTTTTTGATTGCCGTTGTATCAATGCGAGAGGAA 325352 33 100.0 36 ................................. GCACTCAAGGTCAACAATGAAATCATTATGATACCG 325421 33 100.0 33 ................................. ATTGTATTTATACACTACATTATATTCCATTTT 325487 33 100.0 35 ................................. TTGATGATGTTGTACCTATATTACGATTTTTTATA 325555 33 100.0 35 ................................. AGCTTGCGTTATATCTTTATCTTCTCTAAGTCCTC 325623 33 100.0 36 ................................. GATAGATATGGAAGATTTATATACACTTCTTAATAT 325692 33 100.0 40 ................................. AATCTGATATACAAACGATATTGAAATTATCCAAAACAGC 325765 33 100.0 35 ................................. CGAAAGCGTCCACCGGGTAAACCTCGAAAGAGTGC 325833 33 100.0 38 ................................. CAGGATAAGTCCTCGTCCATAATGACACGACCGTTGCG 325904 33 100.0 34 ................................. CCTGGTGGTGAGATAGACCACCTCGACAACATCT 325971 33 100.0 36 ................................. AGAATCGTAATAAAAAGAAGGTGAAGCGAAATGTTT 326040 33 100.0 36 ................................. CACAAGTGAAGCGGCTGTCTCAAAGTCCGACCATGA 326109 33 100.0 34 ................................. ACCGGAGACTGACATTGAAGCTCTGATTGCAGAA 326176 33 100.0 35 ................................. GCAACTCGTTTCGGTCGAGAGGTGGGTCACAGGCA 326244 33 100.0 35 ................................. GTTTGTACCTGCACCCTTAGCATTTACAGACAGAA 326312 33 100.0 34 ................................. AATAAACGAAAAGCAAGTTGTTATGATACAATGG 326379 33 100.0 41 ................................. AGCTTAACTTAATAAAATAAAATAAAATAAAAATTGAGGTG 326453 33 100.0 34 ................................. CGCTTTTGCTGTTGATGGTGCTACTACTACTACT 326520 33 100.0 35 ................................. GCACATCAACAACATTCGGCGGAATTGTTGGCATG 326588 33 100.0 36 ................................. ATATAATCCAAACTCACCTCTGTTTGAATTATATCA 326657 33 100.0 36 ................................. GCTAAGACGGCTATGAACGATTACACAATGGAGGAC 326726 33 100.0 33 ................................. CCGACAGAGTACGAAGAATAAGGAGGACAACAT 326792 33 100.0 35 ................................. GGCGTATCGGCTCTAAGTGGGGTCACTCTCTATGG 326860 33 100.0 34 ................................. TCGAGCGGCGTATGCAAGCCAAAGCTGCCGGGGA 326927 33 100.0 35 ................................. TCCGATAATGACCGAGCAATGCTCCTGTATATCTA 326995 33 100.0 35 ................................. TTATTGTTATTGCAGTAGTAAAAGTAGTTAAAAAT 327063 33 100.0 35 ................................. GATATTTAGTTTGGCGACTTGTAATGATATGCCGA 327131 33 100.0 35 ................................. TTGTAAATGGAGAATTGTATGCAGTCACACCCGAA 327199 33 100.0 33 ................................. TCCAATACCTCCAGGCAATTTACTTGCCATATA 327265 33 100.0 33 ................................. AACGCAACAAAAGTAGCACAAAGACTTGAAGAA 327331 33 100.0 35 ................................. AGCATATGTAAGAGTTATCCAACGACACTTCTTTA 327399 33 100.0 35 ................................. TGTTTTAGCTGCTTGGATAGCAGCCGTAGCCATAT 327467 33 100.0 37 ................................. GTAAGCATTTGAAAGAGCGTTTTCCAATGTGCAAATG 327537 33 100.0 36 ................................. TCGGAGGTTAATCTTAAAGCCTCCGCCCATCACCCG 327606 33 100.0 34 ................................. AGCTGCGAACGCATTAACTGCAACTACTGACATA 327673 33 100.0 35 ................................. TAAGAAATTTAGAAATATACTTAATGAAAATGGGT 327741 33 100.0 36 ................................. CGTAAATGGGTGACAAGTGAAATTCTTCCCTCAATT 327810 33 100.0 35 ................................. TCTTTTGCATTTTTTGTTTTTGCATATTATCGTAT 327878 33 100.0 34 ................................. CTATATAATCCAAGACTTTACCCCAGCCAAATGG 327945 33 100.0 35 ................................. TTCATGGTAAGACCACTCGTAACGGTAAGTCTACT 328013 33 100.0 33 ................................. ATTTGCGTAATCAATTAATTTGTTACGCTTTGT 328079 33 100.0 37 ................................. TGCGATTTAATCGCAATATATATATTTAAAATCTATG 328149 33 100.0 37 ................................. ATAACCATGTGTCCAGTCGAGGCTTGTTTGACTTTAG 328219 33 100.0 34 ................................. CAGGAGAAACGACATTTAAATACGAATACGACAG 328286 33 100.0 35 ................................. AGCTCCCAGCTCTACTAAGCGAGAGAGTGTCACTG 328354 33 100.0 34 ................................. AGAAAACGGCTTAGAAATCGTGGATATACAAATA 328421 33 100.0 38 ................................. GCTTGAGGACTATATCACTGTTGCGGATGTAAGTACAA 328492 33 100.0 35 ................................. CGCAGGAGCGATTGAGGGAGTATTAAGTAGCCAAA 328560 33 100.0 34 ................................. TGCCGCCAGTTTGCGAATCGTTGAGGGGCAAAAA 328627 33 100.0 35 ................................. CGCTACTGTTCGGTTATCGTTGCGGTATGAGATTA 328695 33 100.0 34 ................................. TTCATACCAGCCGAAAACAGATTGCCTAATTGCG 328762 33 100.0 34 ................................. GTCTAAATTTCCGTTTTGTATACCATTTGATATA 328829 33 100.0 34 ................................. ACAAATTGCGTATTTAAAAATTGTGCATATATAC 328896 33 100.0 35 ................................. AAGACCTCATACAGCGTTTTTAGTTGGCTTGAGGG 328964 33 100.0 37 ................................. CGAGCAGGATATGTGGAAGTATTCGTCATTTTGGTAC 329034 33 100.0 37 ................................. CCTCCGAGGAGACGAATCAATCCTCATTGTTATCCAG 329104 33 100.0 34 ................................. GATTGATAAGCTCCAGCCAGCTCTCAAGGATACT 329171 33 100.0 36 ................................. AAATATTAACGGAGTTATACGCTTACTCGGCGGAGG 329240 33 100.0 35 ................................. TGCTTTTAATTCAGCTTTAGAGTACTTGTTGATAA 329308 33 100.0 36 ................................. TGATAGTCTCCACGGCGCAAAATGTAAGGCCACTCG 329377 33 100.0 33 ................................. GACGACGGCTTTCGCCTGATTTTTTGCCGCCTT 329443 33 100.0 35 ................................. TTATTGTTGAAGCATTGGAAGCTCCAGCTGATACA 329511 33 100.0 35 ................................. CAAATTGGCGATAGAATGGGGGCAAAATTGGCTCA 329579 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ========================================= ================== 130 33 100.0 35 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : GATCTTGATGGTTATCCGCCCTTTATGTGGAAGTAGGTGTAATTTATATGCTTGTGCTTATTACCTATGATGTAAATACTGAAACTACTGACGGCAAAAAACGCTTGCGTAAGGTTGCTAAAGAATGTGTTAACTATGGAAAAAGAGTTCAAAACTCGGTTTTCGAGTGTGTTATGGATGCAGCAACAAGCAGGCTAGTCAAAGAAAAACTAATAAATATAATAGATGAGAAATTTGATAGCATAAGATTCTATTACCTTGGAAATAACTATAAAACTAAAGTGGAACATTATGGTATAGATAATACATTCGATGTGGAGGGAGTGTTGCTATTTTAGTGCGAATAGTAAGCTTACATAAATTTACAAGGATATTCGCACCATAAAAATATAATTTTGCAAATCTAATATTAAATCTGCTTTTATATACCTAACTATAATTTTGTGAAAAAGTGCAGATATATAGTTGATTTAAGAGTAAATATTATGTTGGATTTTGCT # Right flank : TCGGAGGTTAATCTTTTGGACCATAGTCAATAAAGTAGACAAGTAAAAGAGCAAATTTTACAAAAAATTCATTTCTGCCTGATCAGGAGAGAGGCCGTTATTGTGAGAATGAGGTCTGAAAGAATTGTAGAAACCGTTGATATACTGAAAAATGCTCAGTTTCAGTTCATCAAAGGAAGAGTAAGTTCTGCGGTTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //