Array 1 3793-54 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVSZ01000001.1 Streptococcus anginosus strain OUP21 oup21.s4-trimmed-pair1.paired_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3792 32 100.0 34 ................................ TTCATTGTTAAGGCTAAAGCAGAAATGCTAGTTT 3726 32 100.0 33 ................................ ATTTACATTTTTATTTTATTTTTATATATAACG 3661 32 100.0 34 ................................ TGTAAACAAATCAAAAAATAAAACTCAGTCATAC 3595 32 100.0 34 ................................ AATAATTGTTTCAAAAAATGTCGGAAAATCATTG 3529 32 100.0 35 ................................ TATTATTTCACAAGTTGAAAATATCAATCATTTTA 3462 32 100.0 36 ................................ CAGAACGTTATAATCAATTGGAATTATTAGATGAAC 3394 32 100.0 33 ................................ AACTATCAAACCTTTTAACTTTTGAACGTTAAC 3329 32 100.0 34 ................................ ATTTAGATAGATGTCTGGATAATTAGCACCGTTT 3263 32 100.0 34 ................................ ACATGTCGGACAAGGGCAATACGGCTCTGGTAAT 3197 32 100.0 35 ................................ AAGCTGATTATAGATAGATAAGATGTTTGATTTAA 3130 32 100.0 34 ................................ TTCTTTAATATTTGATGTAAATGTAAAAGCATTA 3064 32 100.0 34 ................................ CATTACAACGCACTTGCCATAGTCCATTGACATA 2998 32 100.0 33 ................................ AAATAATTACGGAATTTCTGAAACTACGATAGC 2933 32 100.0 36 ................................ AAGTATTATAAACAAATTTTTTTTGGTTTCGATTAT 2865 32 100.0 34 ................................ TGAAACGTTTACATGATTATTGGTATAATCAACT 2799 32 100.0 36 ................................ TATTATTTCACAAGTTGAAAATATCAATCATTTTAG 2731 32 100.0 34 ................................ AAATGAACAAAAGGGATAAAATCTATACCGTTGA 2665 32 100.0 33 ................................ TTTTTATTTTTTTAATAAGTCCAAATGATTTGG 2600 32 100.0 35 ................................ AGTCATTCTAGAAATCCTCCCCTTCCAACATGTCC 2533 32 100.0 34 ................................ GTTAGACAAACGAGCGCTGAATCAAGACGAGATT 2467 32 100.0 35 ................................ TGAATATGTTTACTCTCGCAAGAAAAGCAAAAAGA 2400 32 100.0 33 ................................ GCTGAAGGTTCGATATGGTGTCAAGGTCACAGG 2335 32 100.0 35 ................................ TGTATTCGTTGATCAGACTGCGATTGAGATGCTTG 2268 32 100.0 35 ................................ TAATTCCCAGAATCTACATCGTGAAGGGTAATTCT 2201 32 100.0 34 ................................ AAGTAATTTATTCTGATATTGTTGAATTGTGTTT 2135 32 100.0 33 ................................ AGAAAATCAAATGAAAGTATCTATTTACGTGCA 2070 32 100.0 33 ................................ ACGCTATTCCATTTCTATGCAAGCTAAAATAAA 2005 32 100.0 35 ................................ AGGGTTGCATAATTCGTCTAAAAGTTCCAATTGAT 1938 32 100.0 34 ................................ AGCTATGCAGCTCACTGATATTGAACAATTTATC 1872 32 100.0 35 ................................ TCTCCCGCCTCTGTTCTGGCTTCCCCTTTAGTTAC 1805 32 100.0 35 ................................ TGTCACACGTTCGACCACGTTATCAAATAAATCCA 1738 32 100.0 33 ................................ AAAAGGGAGCTTGTGCAACGGTTATGCCAAGAA 1673 32 100.0 34 ................................ TGCCTTGACTCCCAAGCTTGAATGGTACTCTGTC 1607 32 100.0 34 ................................ ATCCATAAACTGCTTATGCGCTTCTGGGCTTTCA 1541 32 100.0 36 ................................ TTGTTGTCATTGTAGATAGTCACCCCCTTTGTTGTC 1473 32 100.0 34 ................................ CTATCGGTCTTGACCTTGAAAAGAATGTTGAACT 1407 32 100.0 33 ................................ TATAATCATCTAATTTATTTACCTCACTTAATT 1342 32 100.0 33 ................................ AAGATTCAATTTGAGAGCAGCTTTAAATCTTGT 1277 32 100.0 35 ................................ CAACAGCACGCCAAAGATAGCCAACGGAAAAGAAC 1210 32 100.0 34 ................................ ACGGAATCACTCACAACGTAGAAGAAGCTGCGGA 1144 32 100.0 34 ................................ AGGATAAGGAATTATCGTGGGAAGCGCGTGGATT 1078 32 100.0 35 ................................ ATAAGAGACTGGATAGAATAAGCGTTCTTCGTGAT 1011 32 100.0 34 ................................ CTGTTAGTGTTCTTTTCATTTTATTTTTCTCCTT 945 32 100.0 34 ................................ ACTTGCAACAGTACTGATTGCCTGCTGTTTCATT 879 32 100.0 34 ................................ TTTGACCCAGATTTTGTCAATAAAGAAAGCGGAG 813 32 100.0 33 ................................ ACGTATGACTGGTTTTTGGATGTATATGTTTCA 748 32 100.0 36 ................................ TTCTAGTTCGTGCTGGGTTGTCCAGCCCCGTCTCAA 680 32 100.0 33 ................................ TTAAAATGGATAAATGATAATGCTAACGCTATG 615 32 100.0 34 ................................ AATCTGCACTTGTTTAAGACGCAGAGTCATTTCC 549 32 100.0 34 ................................ TGTGTGTTTAATGTGCGTGTATTTCGTCACGTTA 483 32 100.0 35 ................................ TTTGATTTGATTGTTTTAAGTTCAAACAATAAGCA 416 32 100.0 34 ................................ TGGTAAATGTTGACGAAGGACATCAACTTGACCG 350 32 96.9 33 ..........................C..... TGAAAAAGAGGACTATTTACTGAAAAAAGGCTA 285 32 100.0 34 ................................ AAGCTCTATGCGTTCGTCTTCTTTTGCTTGTTGT 219 32 100.0 35 ................................ AAGCATACTGTCCGCTATTCTTGGGGCAGTAAGAC 152 32 100.0 35 ................................ TGGTCTTTTGTTGTTTATGGTTTTGGCTGGAGAGC 85 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 57 32 99.9 34 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : CCAAAGCAATCCGTGGAGAATTAGAATCGTATCCACCATTTTTAATCTAGGAGTAGGCTTATGATGGTTTTAGTAACTTATGATGTTAATACGGAAGCAGCAGCAGGTAGGAGACGTTTACGACATGTGGCAAAACTTTGTGTTGATTATGGTCAACGTGTACAAAACTCAGTTTTTGAATGCTCATTGACTCCAGCCGAATTTGTAGAGATAAAAAATGAACTATTAACTATCATTGACCAAGAATCAGATAGTGTTAGATTTTACTTACTTGGCAAAAATTGGCAAAATCGTGTTGAAACGATTGGTCGAGATGATAGTTATGACCCTGATGTAGGGGTATTGCTTTTATAAAAATTTGTGTGCGAACCTAGGTTACACATCAAAACCTGTGACATTCGCGCATCAACTTAGAATTATAGTGGCAAAAATCTCGTTTTATTGGGGAAACTAGCTCAATAGATTCTTGATTTTAGCTACAAACAGTGTAACTATGCGCT # Right flank : TAACTTTAACCGTCTTAGAACTTTCAGATACTTTCGTCGCACCCTTCGCGGGTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //