Array 1 75232-73063 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZUJ01000014.1 Bifidobacterium tissieri strain RST11 NODE_14_length_75341_cov_108.418832, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================================= ================== 75231 29 100.0 32 ............................. TCTGCTGGTATGCGGTCATCATGCGCTGGTCA 75170 29 100.0 32 ............................. GCGACGAGATCGACGCCGATATCCTCAACCTC 75109 29 100.0 32 ............................. CACATGGCGCCGATGCGCATTCCGGTGACGCT 75048 29 100.0 32 ............................. CATAGGGATGATACCGCCACGCTTGTAACCGC 74987 29 100.0 32 ............................. GTCGCCGTCGTCATAGGTCGGGACCTCATCGG 74926 29 96.6 33 ............................A GGCATGTCCTTCAACCCCGAATCAACAATCAAG 74864 29 100.0 32 ............................. GTTCCGGGTTACGGTCTTAAATGGGACACGGG 74803 29 100.0 32 ............................. GCGGTGCCGGAAGTCTCGCGAACATCGCGTTC 74742 29 100.0 32 ............................. CCGTCAAGAATCGTATTGCCGGTTTCCTCGCT 74681 29 100.0 32 ............................. GAGCACCAGAACCCGTCCTCGAAGACCTCACC 74620 29 100.0 32 ............................. CTCCTCAAAAGTTAGTCCGCTGACCGCCCTCG 74559 29 100.0 32 ............................. CGATCCCCTCCTACGGGGAAATGCAGTGACGA 74498 29 100.0 32 ............................. CTGGGTTCGTCCCACTCGCTGCCGTAGTAGTC 74437 29 100.0 32 ............................. GGGACGCCGACTCGTGACGGGTACACGTTCAC 74376 29 100.0 32 ............................. GCGTCCGCGACCGTGTACGCGGATGAGGCCAC 74315 29 100.0 32 ............................. GAATCAGGTAACACGATCCCGCTCCTGTTCGG 74254 29 100.0 43 ............................. GACGGGTGGATGATCTCGATCGGCCCGAACGGCATGTGGAGTC 74182 29 100.0 32 ............................. CCCATTTGAGGGAGCGTGTGGGTGTGGAGGAT 74121 29 100.0 32 ............................. CTTTTTCCTTTCTTCCACTTGGACGCGCATCC 74060 29 100.0 32 ............................. CTCGCGGACAGTTCGGATACGGTCAGCGTGAC 73999 29 100.0 32 ............................. TTTGCCGCCGCGTGGCAGTATTCCTCGTCTGG 73938 29 96.6 32 ............................T TCTGCGCAGTATAGACCGGCGACCCATTGGAC 73877 29 100.0 32 ............................. ACTGCGCGATACCCGGCCGGGAGAGAGTCCTA 73816 29 100.0 32 ............................. CGTACCGGTCGTATGCTCCGGGCTGTGAATCG 73755 29 96.6 33 ............................T TCTCGTTGGACGGGACGGACGCGGTGGCGCGAA 73693 29 100.0 32 ............................. GTGCGCGGCGGCCGCACCATCATCGTCAGCGT 73632 29 96.6 32 .....T....................... TCCCGGAGCTGTTCGCGCTGCCACAACAGGCC 73571 29 93.1 32 .....T..............A........ GGGCCGGCGTTGACCCATCGGAGGGTAACCAT 73510 29 100.0 145 ............................. ATGGCGCAGCCGAGGCCGAGGCCGCCGAAGAGCAGCGCGAATATGCCGAGCTTGTTTTTCATGATGATTCATGGATAATCTGGGAGATGGGGGCCACGACTCCGGATACTGAGGATATTCGGAATTCGCGGCCCTTTCCGTTACC 73336 29 100.0 32 ............................. CTCTGGGAATCCTACAGGAACGGCGGCGCCAC 73275 29 100.0 31 ............................. TCAAGGCCAACAAAAAATCCAAGGCATCACA 73215 29 100.0 33 ............................. CCCATCCGCAACGGACACCCCCACAACGCCATC T [73189] 73152 29 96.6 32 ............................T GCGTCGTCGGATTCGAGTCAACTGGCGCGGGC 73091 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================================================================================================================= ================== 34 29 99.3 36 GTTTGCCCCGCACACGCGGGGATGATCCG # Left flank : CCTGTCAACCATGCCCCAGGACATGGCGTCAACCATGCCCCGAGACATGCGTCAACTATCCGCTCGAACTAGACACCGGCAACAAGAAAACCGTGCAAGGATTCAAACA # Right flank : CGCAGATCATCAACCAGTGGGCGCGGTTCGTGGTGTCGGCGGCGGCAGACCGCGGAAGACTTCCGCGACGGAAGCGTCACTTGAGTGACGGCAACGTGTTCGAGCTGTCGTTCGACGGTAGAATATTCCGGATAAGCCAAACCGGGTCGAGGATGACAAGATCGGACTACTGGTCGGCCACATAAAACGTACAAACGTAACGTACCGCTACTGAGTTTGATCGAGGTGGTCGAGCGCATCGGCGTTATCAGGGGGCTTGGCCAACTACAAACTTCCCAGACCCAAAGCTATGGTCGGCCGGGCTCGCAGCTGGCCACCGTAGCTGGAGTGGTTCTGGGTATTTCCGTACTCCAACAATCGGGTCTGGGTATTTCTGTATCATGAACACCCCCAACACAGGGTCTTCGTGATACGGAAATACCCAGACTCAGTTATCTATACCGGTTTGACCCAGACTTATCGTCCGGGTATACCCAGACCCAAGTCCGTCGTGTCCGGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGCACACGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCCCGCACGCGCGGGGATGATCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //