Array 1 61378-59369 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHC01000007.1 Acinetobacter chengduensis strain WCHAc060005 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 61377 28 100.0 32 ............................ CTGTGCAGTAGCCAACAAATCTTTGGCTTCAG 61317 28 100.0 32 ............................ TTTGGCACGTTCTCAGCGCATGGAAGAAGTAT 61257 28 100.0 32 ............................ TTGAATTTATTCGGTGTTGTTGCCGGCGCATG 61197 28 100.0 32 ............................ GCCATCGTCGTGCTTTACATTTACAGCAATAT 61137 28 100.0 32 ............................ TAAGATGCACTCTTTTTGGTTGAGGGCCTTAA 61077 28 100.0 32 ............................ TGTTTTCATGTTGTTTATTCTACATGTTGTCA 61017 28 100.0 32 ............................ ATTGTTTGCAAAGAATTTTGCACCGTATTTTT 60957 28 100.0 32 ............................ GAACTCCAAAGCGGCGACTATGCTTGGCCATG 60897 28 100.0 32 ............................ AATTCCGACAATTGAATTTGTTGAAGTTGATA 60837 28 100.0 32 ............................ CGTCATGCTTGCAGTGGTGAACGAATATGCAG 60777 28 100.0 32 ............................ AAGCAACTTGACTGCTGGATTGGCTGGCGTAA 60717 28 100.0 32 ............................ AATATCGAGAACATCGTTTTCATTAAAGTAAG 60657 28 100.0 32 ............................ TGCATTGCCTCGGTTTCAGATAAGAACATTTC 60597 28 100.0 32 ............................ TTGAACTCGGCTTTCACTTACATCAAATGAGA 60537 28 96.4 32 .......A.................... TGTAATCGTGTCGCCAGCTCTATTTACTTTTG 60477 28 100.0 32 ............................ ATAAGTTTTGCCATCGTCTGGCGTTTTACTTA 60417 28 100.0 32 ............................ AAATTGTTCTCTGACAAGTTCGATTGAACGAT 60357 28 100.0 32 ............................ TATCTTTGGTTGATAGGGTTAGATTGCGGGGT 60297 28 100.0 32 ............................ TTAACCATCCTTATGACAGATTGCCAACGTCA 60237 28 100.0 32 ............................ ATCATAAGGAGCTAAAGCAGTACGAATTTCAG 60177 28 100.0 32 ............................ GTGACAAAATCATCTGCAAAATACAGCACACC 60117 28 100.0 32 ............................ AATTGATGCATCACTCAACTTCCTAACCGCAA 60057 28 100.0 32 ............................ AAGCAAAGAATAACAAGTGCCACCGACATTAT 59997 28 100.0 32 ............................ GCTCTGCAACTGCTCATACTCATAAACTGCGC 59937 28 100.0 32 ............................ TAATGGTGATTTGGCAAATGAGCAATTAGGTG 59877 28 100.0 32 ............................ TCAGACATATCTTCAGCAATGCCTGCTTCCTT 59817 28 100.0 32 ............................ AAAAAGTATTTGCTTCTGATACCACTGGCGAA 59757 28 100.0 32 ............................ AATTACAAAAAAAAGAACGACTATCGGTATTG 59697 28 100.0 32 ............................ GCAGGCTCAATTAGCAAAGCACTATTGTTCAT 59637 28 100.0 32 ............................ TTTTAAAGCCAAAGCGGTTATGCAAGTTGTAA 59577 28 100.0 33 ............................ ATTAGCCGAAGGTCAAACGCAATTAGCCATCTC 59516 28 100.0 32 ............................ AGTGGGCTTTTTTTTTGTCAATGTTGCCAAGA 59456 28 100.0 32 ............................ GCATAAGCTATTATCTTCCCGTAATCTTTTAA 59396 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 34 28 99.9 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GATTTAGAGAAATTAAACATTTCCAAATGGTTAGAGCGTTTAACAGACTATTTGCATATTATTTCTATTCGAGAAGTCCCTGAAACAAAAATTACAGGTTATGCAATGTATAGCCGTAAACAGATAAAAACCAATGCTGAACGCTTGGCACGTCATCGTGTGAAACGTGGTGATATCGGCTTTGATGAAGCATTGGCACGCTATAGCAATGTAGTCACAACTACGGATTTGCCTTATATCCAAATGAAAAGTTTAACCTCTGACAAAAGCTTTAAACTCTTTATTAAAAAAGAATCTGCAGAAAAATCTGAAACTCAGGTTTTTAGCACTTATGGTTTAAGTTCGGTATCAACTGTACCTGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAAACGTGAGTTAAAACTTGGGTCTTTTATAGATTTTAATGGTTAACTCACTGTTATAACTTTATTTTTTGCTATAAGATCACT # Right flank : AATTGTATTTTTTACCGCTCACAATTGAATATGTTCATAGGTGTCTTTTAATCTTAAATATAAAAAAGCCCTAACAAGAATTAGGGCCAATTTATGCAAGCTTTGGATTTAAGTTTTAAACCGCTTCAGCTTCTAAAATTTCAAAATCATGGGTAATTTCAACACCACCATCCATCAGCATTTTACTTGCAGAACAGTATTTTTCAGCAGAAAGTTCAACTGCTTTTGCAACTTGCTTTTCCTTTACACCTTTACCTGTAACCACAAAATGTAAATGAATTTTGGTAAATACAGCAGGGATTGTGTCTGCACGTTCAGCACTTAAGTCACAACGAACCGCTGTAATATCTTGGCGCGCTTTCTTTAAAATGGTCACAATATCAAAAGAAGCACAACCACCAAGGCCATTTAAAATCAATTCCATTGGACGCGGTCCACGGTTTTCGCCACCGTATTCTGCTGAACCATCCATGATTATGCTATGTCCACTTTGAGTTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //