Array 1 23462-24421 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJME01000010.1 Streptococcus oralis strain BCA18 D8894_contig010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23462 36 100.0 30 .................................... TTGGGGGCGACGTGGCTATTCTAGCGGAGC 23528 36 100.0 30 .................................... TCAACTTTAGTCGCTTGCAAGGACGTGAGG 23594 36 100.0 30 .................................... TCTTCAACTTTGGTAGCTTGCAAAGACGTA 23660 36 100.0 30 .................................... TAAGGAATTTCAACACGTTGCAGAAAAACT 23726 36 100.0 30 .................................... GCAATCTGAACTCGCATTTACAGATGGAAT 23792 36 100.0 30 .................................... TACTCTGAGATGCTCGGAGGTTGTAACCTT 23858 36 100.0 30 .................................... TAGCTATTCATCTTGAAACTGGAGAAACTA 23924 36 100.0 30 .................................... ATGTCATGAGCTTCTTTGATTAGAGAAAGG 23990 36 100.0 30 .................................... TTTACTGGATGGATTGGCGCTTGATGAAAA 24056 36 100.0 30 .................................... AAGGCCTCTGAATAGTGTAAGGATGGCTCT 24122 36 100.0 30 .................................... ATTTTCTTGATAGCTATTGCTTGTCAAAGT 24188 36 100.0 30 .................................... TTTACAGCTTAAATCCAAGGATTGAGGTAG 24254 36 100.0 30 .................................... ACCACTAAAAGTCATGTTGCTTTTGACTCA 24320 36 100.0 30 .................................... GGGCGCCAAGCCAGTGGAAGCGATACCCAA 24386 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.8 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAACGACAAACCAGAAGTCAAATCCATGATTGAAAAGCTAGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGCTTAGAAAATGAACTAGACCTGGAATACGATGAAATTACTATCCTAGAGTTGATTGATGCGTTAGGAGTCAAAGTTGAAACTCTAAGTGATACGCCTTTTGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTTTCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGAGTCTTATTTGTCGAACCTCGAAAAGTCTTTGATTTCCCGCAGTATGTGCTGGATCAAGACTATTTCCTGAACCCCGAAAATATGGTATAATAAGGGTAACAATTGGAACCTAACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAACTTTTCTACGAG # Right flank : AAAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCCCCCTACACATAGGTCATTCCCTTATAGCAAAGGAAAACGGCTAGTGCGATAAAAAGTACGGTTGCCCCGATTCGCTGGCTAGTACTGTACATCCTTCTCTCCCATTTAACTGGGAAGATGACTGCTAGAAAGGAACCGCCTACTGCACCTCCGATATGCCCAGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATGATATTTATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGAATATAGGGGTTGCGAGTTGCGTAACGCAAAACGATAATCGCAGCAAATAGTCCGTAAAGAGAAGTGGATGCCCCAGCAGCGACAACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAGAGAAAGAAGAACTGCTTAGAACCGAAAATTTCCTCCACTTGTCGTCCAAGAAAGTAGAGTGAAATCATATTGACAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //