Array 1 2437-1310 **** Predicted by CRISPRDetect 2.4 *** >NZ_VINQ01000022.1 Aquicoccus porphyridii strain L1 8-17 scaffold_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2436 29 100.0 32 ............................. CATGATCTACGAACGCCGCCGCAAGACGCTGC 2375 29 100.0 32 ............................. ATAGAAAACGGCGTTTCCGGAATTAACGGTCA 2314 29 96.6 32 ............................T CACGCGCTTTGTGTGCAGGACGCGCTGCGCCA 2253 29 100.0 32 ............................. CACGGCGGATATCGCCTCCAATATCCTGAGCG 2192 29 100.0 32 ............................. CAGATCCGCTATGCCAATGCGCTTTTTGGCGC 2131 29 100.0 32 ............................. GTGATCGGCCGGGAATGACATGATCCCGGCGA 2070 29 100.0 32 ............................. CGACCAGACCACGGCGGATGATGACGGGTGGA 2009 29 100.0 32 ............................. TTCGAAAATCTCGTCGAAGGCAACAATCGCCG 1948 29 100.0 32 ............................. CAGAAGGACATGAGGCATGTTCGCAGCAGTCG 1887 29 100.0 32 ............................. TGCAATCGGAGCGTCCCCACGATGGGAATTGA 1826 29 100.0 32 ............................. ATGGCTCAGGCAAAGATTGCCGAGATCAGGAC 1765 29 100.0 32 ............................. ACATGTGTGCCCGCCGGCGCATGGCGCAGGCT 1704 29 100.0 32 ............................. CCAGCGCGAGCTGAGCGCAAGCCAGCGCATCG 1643 29 100.0 32 ............................. CCATGATCTGCGGTGCGCCCCAGCTCGTCGCC 1582 29 96.6 32 ............................A TACCTGATCGAAGGGCGCTGCGCGGCCAGTAT 1521 29 100.0 32 ............................. CTGCGCGGCACGGAAGTCGAGTATTCCGAGAT 1460 29 100.0 32 ............................. CAAACAGCTGCGCCATTGCGGCCTCGTTGCCG 1399 29 100.0 32 ............................. ATCAAGGTCGCAACGATGCGCGGGCACCTGCG 1338 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.6 32 GGCTCCCCCGCACTCGCGGGGATAGACCC # Left flank : AGGCCGCGCGCCGTGTATCCGAGCACCATGGCGAAAACATCGAACGCACAACACGACGACTGACAGGTAAGGCGCTTTCCGACGAAAAGGTCATCCCCGACATGATCGAACGGATAAAGGCACTAATCGAGGGGCGCGACTGATGCCCCTAACCGTGATTGTAACCCGCGACGTCGAGGCCCGCTACCGCGGTTTTCTCACGTCTGTAATGTTGGAGGTGTCGGCCGGTGTCTATGTCGCGCCAGACATGTCCTCAGGTGTGCGGAAACGGGTCTGGGCTGTCGTATCTCATTGGTGGGAAACGCTGAGGCGTGGCTCTCTCGTAATGGTCTGGCGCGACAAAGCGGCAACTGGTCATCTGCACATTGAAACACTCGGTGAAGCGCCGAAGAAAATCGTTGACGCAGATGGCGTATTGCTCGTTAAGCGCGAGTGAGATCAGAAAAACTCACCCGCACGCTCTTTGACAATTGAATAAAAACAAATCACTACTTGTGAGA # Right flank : GCCGGGGGCGAACGGGAACTGCCCCATATATTGGCTGCCCAGCCCTTGTGTTACACCAAGACCGAGCACTTGTGGTGCATTATGGTTCACTGATAATCTGAAAATCGCAACACGCACATCTGCCAAGTTACCACATTGAGGCCACAGAAATTCAGCAGGAAATTGAGGGTAGGGTCATCCTTAGATCCGCGAATCTCTGGAATTTGAAAATGCTTTCGGTGTTCACGGCTCCCGATGGCAGCTCGATCGCGCTTCTGAACTACACGCACCTGACCGGCATGTGCAGGGGCGGCGCGACATCAGGCACGCCGACAAGTCGCGCAGTCATCTAAACCAGACCTTCATCGGCACCGAGAACTGGGCAGCCGAGGCGCTCGAGATTATCCAGGAAATCCGCCTCGAGAACTTCCTCAACGAGGTGACCGCGCGGCGTGAAGACGCTATGCGTCAGACCATGATTGAACCTGAACCGGAATATGAGGCCCGGCTAATTCTCACGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACTCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA //