Array 1 2637624-2640758 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2637624 36 100.0 38 .................................... TACTGCAAGTCGATTGAATCTTTCAAATCATCCAGCGT 2637698 36 100.0 38 .................................... CGACAAGCCCTCTTTGCTGCTGACCTGTGGGGATACTT 2637772 36 100.0 38 .................................... CGCAAAATATTCGACTGCGCGGACAGCCTAAGCTCGGC 2637846 36 100.0 40 .................................... TCTTGGTTAGTCGTACCATGTCGTGCGTCCTTGTTTTCGA 2637922 36 100.0 38 .................................... ATCGGTCTCGGTTCCGGCACCAGCCAAAGCAATGACGC 2637996 36 100.0 37 .................................... TCGGCGCCACGCCATTTTTTCTCGGGGCCGTAAGGGC 2638069 36 100.0 37 .................................... ACGTTTACAAGCGCTGAATATCCCCAGTTATCCTTCG 2638142 36 100.0 38 .................................... ATCAAACAACCAAATATTGAATCCAGTTGGGTGCATTA 2638216 36 100.0 38 .................................... CAGCTAACACGGAGATGTGGGACTGGTGTCCAGATGTC 2638290 36 100.0 35 .................................... GGAACATGAGAACAAGATTCCGCCGGTTTTTCGTG 2638361 36 100.0 38 .................................... GTTTGGACAAAGATGACAACTGCGGCGAAGACGGGATC 2638435 36 100.0 37 .................................... AGGCCACCTCGACCACCATATTCGAATCTGCTGATGG 2638508 36 100.0 35 .................................... AACCACCTTGACGGCCTCGAGCCTGCCCAACTCCT 2638579 36 100.0 37 .................................... TTCTGAGGGCCAAAAGCCAAAGTCGGAACCATCCCCG 2638652 36 100.0 36 .................................... AGATTCTGCCATTGATCCCATTCGCAAATTGTTGGT 2638724 36 100.0 38 .................................... ATGATATCCGACGGGTGCCGGCGTCGGATATCGGCATG 2638798 36 100.0 38 .................................... GATTCCGCGGGTACCAGGCAGTACTTCGTTCCGGCCGG 2638872 36 100.0 39 .................................... GGCGTGAAACGGATGATCCAATCCAGGTAGTCCGATGGG 2638947 36 100.0 38 .................................... TTGGCTGCGTCCAATTCCAGCCCGGCTTTGTAGATTTG 2639021 36 100.0 38 .................................... TTAGAGATGGAGGGGTTGGGGTTGTTGCATAAGTTCGG 2639095 36 100.0 40 .................................... TATTTTTAATCATCTCGGCCCAGCTGTTCTCTATCGAGGT 2639171 36 100.0 36 .................................... CGAGTAGTTCCTTGGCCCGCTTCTCGTCGACGCGGA 2639243 36 100.0 37 .................................... ATTTACAGGATTTCCCCATCATGGATAGTTTGCCCGA 2639316 36 100.0 37 .................................... ATTTACAGGATTTCCCCATCATGGATAGTTTGCCCGA 2639389 36 100.0 40 .................................... ATTTCACACTCCGTCCTTCTACTTCGAGCAGATGCGCAAA 2639465 36 100.0 38 .................................... GTTGAATAGCCCCGGCGATCTCGCAGAGTAGTACCGTC 2639539 36 100.0 38 .................................... ACTTCGAGCCTGTGGCATAGTACCGATATTATAGATAT 2639613 36 100.0 38 .................................... CGTCCTGACTCCATCGTCCCATTGTGTGTGGTCCAATC 2639687 36 100.0 37 .................................... AGAGTGTAACCCTCCTCCAATTTGCCTGCATATCCGG 2639760 36 100.0 39 .................................... ATGTGTGCGGTAGACGGTCCCAAACCGGAGTTCCCTGAC 2639835 36 100.0 36 .................................... CCCATGAATCGCTTAAACCCACAAAAGCCATTTTAT 2639907 36 100.0 38 .................................... CCTGCCGGCGATCAATCTTGTGGCCAAGGGATTGACGG 2639981 36 100.0 38 .................................... ATCTGCAAAGTTAAGCGTGAGGGTGGACGGCACTTTTG 2640055 36 100.0 36 .................................... GGCTATTCTAGCCCGGGAGTTATGCGAAACAGTTAG 2640127 36 100.0 39 .................................... ATGGTTATCTGGTACCCCAAGGGACCACGGCTGCATCAC 2640202 36 100.0 38 .................................... TGGATGATGTCTGAGTCGGCCTCAGGAATGCTGATAGA 2640276 36 100.0 39 .................................... ATGGTTATCTGGTACCCCAAGGGACCACGGCTGCATCAC 2640351 36 100.0 36 .................................... TGTATGGGGCCCCCATTCTTACCAGTTACCTCTTGG 2640423 36 100.0 39 .................................... ATAAGTGTTACCCCTCTTAGCCGCGTGCCACTTCCATTG 2640498 36 100.0 37 .................................... CCTGTTGGAGCCGCCTGAGCGCCCCCGTGTATTCATC 2640571 36 100.0 38 .................................... ATTGACCGTGTGGAACTTTCGTGGGCCGCCGTGCCGGA 2640645 36 100.0 36 .................................... GCGATTACAGCCGCTCTGTTCCGGCGCCTTATGGGT 2640717 36 88.9 0 .........................C...A.A...T | T,TC,CC,T [2640739,2640741,2640744,2640747] ========== ====== ====== ====== ==================================== ======================================== ================== 43 36 99.7 38 GTAATCAAAGACGAATTCCCTGGAAGGGATTGAAAC # Left flank : AGCCGCGTGCAGTACAGCTTCTTTCATTGCAGCCTTTCAACAGCCCAAAAGAAACGCATGATGGACCGAATCCGCACCTTCATCCGCGAAGATGAAGACCAGGTGCTGATCCTACCGGTCACGGAAACCCAACTGAAAGAGATGGAGTTCATCGGGCTGAAGAGCCGTCTCGATATGGAGGGGGTTCTTATCTTCTAAGCTCCCGCGTCGCTTCGCCATGCGGCGCTCTTCCAGTGGCCGCAAAATACCCCGAAAACCGATCAGCGGTGAGTTGCGCGCAAGAGGTGCAAGCGTGCTTTCGGGACTCAAGGGCGCGAGAGGTGATGCGGAAGCAAAAGGCCGGGGACCGCTCGCGATCAAAAACCACCACAAATTTTAAGAACATAGCACCCGATGAGACGTTACACAGCAAACTGCGGAGGGCTATTCGGGGTCCTTTTCGGAACTCCTCGCAATTCTTCTTGCAGTTCGCTGATATTATTTGCTAACCTACAGGCGTG # Right flank : TGTCTGGTAAACGCCGGAATAAAATGTCCTCCCAGATGAGCGAAGGGTTATTCCTCCAGCAAGACCCAAGAGAGCCGGAGGTGACCCATGCTCAAAAAGGAGGACTGCATGGAGATCAGAGCACAAGTTGAAAAGGGTGTCTACAAGAAGGACATCGCAGAAAGCCTGGGAGTGCATCCAAAAACCATAAGCCGTGCTCTTAGTCGAGGAGGAGTACCCTCGGGGAAAAGACCCGGTGCAAGGGTGAGCAAACTTGATCCCTTCAAACCCTTGATCGACCAGCTCCTGAGAGATGGAGTCTGGAATGCTATGGTGATCTTGCGTGAGATCGAACAGCGAGGCTACACGGGCGGGACCACCATCCTTCGGGAGTACATCAGCCCCAGAAGGCCCATGAGGCAAAGCCGGGCAACGGTACGGTTTGAAACAGATCCGGGAGTTCAGATGCAAAATGATTGGGGAGAGCTCACAACCGAAGTGGCTGAAATCCCACAGAAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATCAAAGACGAATTCCCTGGAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 3149118-3140803 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 3149117 36 100.0 35 .................................... TTGATCACAAACTGCTTGATATCCTTAACATCTAT 3149046 36 100.0 37 .................................... CCCCACCGTCCCCTTAGGTCCTCCGGTAGTTCGACGA 3148973 36 100.0 38 .................................... TTGATCACTGCGGCTACGCCGCCTCTCTCGGTCTTCTT 3148899 36 100.0 38 .................................... TAGGGTCGGAACTGTACGTGTCGAAAGACCGACTGTTT 3148825 36 100.0 36 .................................... TTGGCAAGTCCGAAAGCCAACAAGGCCCTCGGGTAC 3148753 36 100.0 36 .................................... CACATTCCACATCTTCCAATAGGCCTTAGATATTCC 3148681 36 100.0 37 .................................... AATCCATTGAGGAAAACCTGTTGGTTGCCCCCCGTAG 3148608 36 100.0 37 .................................... AATCTCAGCCGGCTGCTGCTTAGATATGGCCGTTTCT 3148535 36 100.0 39 .................................... AACCGACGCCGCTCCTTAGCGGCATCAGCCAGGACAGCC 3148460 36 100.0 37 .................................... CTCTGAGGTTTAGATAAACTGTCGGTATAGGCATGCT 3148387 36 100.0 36 .................................... GGGTACGACTCTTCCCTGAACCCTTCTCGGGCTCAG 3148315 36 100.0 38 .................................... CCAGCAAATCCCACGCGCCATTCGTAACGATGAAATCA 3148241 36 100.0 37 .................................... GGGCATGAAAAAGTATGCGCCGGCGTCTGTCAAGATT 3148168 36 100.0 38 .................................... TATGTTGATTCTGTTCTACATTATTTGAGCCCGGAGAT 3148094 36 100.0 38 .................................... CGTTCACGTGATCGACATCCATCCCATCAGGAATTTCG 3148020 36 100.0 36 .................................... CTAAGCAGTCGAAGGGTTGCAGTGATTCCTATCTGG 3147948 36 100.0 36 .................................... TGCATGAAGAACGCCCTTATACCAGGAACCGGTTGA 3147876 36 100.0 40 .................................... CAGTCAAGGTCCAATCCACGACCATATCCTTGATACGCGA 3147800 36 100.0 36 .................................... TCAATCGTCGACCTATCAGCAAGCCTATCGAAATCC 3147728 36 100.0 37 .................................... AACTCTTCCTGCCAACATTATTTTGCCAAGAAATACG 3147655 36 100.0 41 .................................... GGTTTTCCTGGAGCATTTCCCTTAGTTTCATTTATTTCTCC 3147578 36 100.0 38 .................................... CAGCGAGTATCAGCGACTATGTCGCCAGAAGTGATGAG 3147504 36 100.0 37 .................................... CGATTATGCCTTCGTAGCTTTGCTCAATGAAGCTGTC 3147431 36 100.0 37 .................................... TTCCTCGACAGACACGTCTTGGCCATCAAAGAAGGTA 3147358 36 100.0 37 .................................... TTAATTCGATGCCTACGGCCACCCGTCATTCCTCCTT 3147285 36 100.0 37 .................................... CACACTGGGCAGTAGACCATGCCCAGAGACTCCTCCA 3147212 36 100.0 38 .................................... TAAAAAAAGGGCGGGGGCCGGAGCCCCCACCCCCTAGA 3147138 36 100.0 39 .................................... TGTCGTCCTTGAACGGGCACTCCTGTAAGCGCCATCCAC 3147063 36 100.0 35 .................................... TAGAAGTCGTAGCCGGTCTCCCGGCTGCGACCCTT 3146992 36 100.0 37 .................................... CCCCGTTCAATGATGCTCTTGAGCTTGTCCGTGATGT 3146919 36 100.0 37 .................................... CAACTCCTCGACGGAGTCTACGGAGTACCCGCGCCGG 3146846 36 100.0 37 .................................... ACTACATGCTTACGGTCCGTCTCAGGTGCTTCACTGC 3146773 36 100.0 36 .................................... TCAGCCCCGCCCTGCCTGTCTTGCTTTGGAGCATGC 3146701 36 100.0 35 .................................... TTATACGTTTAGGGCAGCCTTAGCCGCCACCAGGG 3146630 36 100.0 36 .................................... TTGCTCCGCTATGACGAAGGCCTTGGGATCAACTCG 3146558 36 100.0 36 .................................... CACTCACGGAGACCAGTCTAAAGATTTGTTTGTCTG 3146486 36 100.0 36 .................................... GTGCTCGGTACCACTATCGATGCCGTTGGCGATATT 3146414 36 100.0 38 .................................... ACATCGTCCGCGAAAAAGTCGCACTCCTCCTTATTGTT 3146340 36 100.0 36 .................................... GAGCCCTATGCCCCACGGGCAACTCCTTTGGGCTTA 3146268 36 100.0 37 .................................... CTGATAAAGACACTGACGAAGTACCCCATCCAGCCCC 3146195 36 100.0 37 .................................... TGGGACCGCCAGTTTGCGGATTTTCGTTCCACCTTGG 3146122 36 100.0 38 .................................... AGCCGTCCGTGGTTCGGAAAAGTCTTGCGGTTTTTTCA 3146048 36 100.0 45 .................................... GCGGTCCGCTTATCGGGAGAGGAACTATCTTCGGGCCATCGCCTC 3145967 36 100.0 37 .................................... GAGGGCTGGGTTCTTTCCTCTATTCGATCTCGATCAA 3145894 36 100.0 38 .................................... GTGATTTCGACATTAGAGATTGAAAAAATCACTTTTTG 3145820 36 100.0 37 .................................... TGGGCCCCCGATTCGATTCCTAGGGTGCAGCCGGCTG 3145747 36 100.0 35 .................................... CGTTTTCGGCGGTCAGGCCGAAAAGCCGATGTAAT 3145676 36 100.0 36 .................................... TGGAGCGGCGTTGACGGTGCGGTGGAGATTAGTGTT 3145604 36 100.0 39 .................................... GGTGCGGCGAAGGGAGGTGGGGTCCATCTCCCCCTCGCG 3145529 36 100.0 37 .................................... TCTCTTCTCCTCCCGAATGAGCGATAAGTCTAGTTTG 3145456 36 100.0 35 .................................... CGATGAAATCAATGAAGGAGGAGTTAGTATCCCTC 3145385 36 100.0 41 .................................... GGTATCGGGGCCTTTAAGGGCTCGGTGAGCCTGATCCGGAG 3145308 36 100.0 39 .................................... ATCGGGGCCCGCATGGGTTCCGTGAGCCGGATCCGGAGT 3145233 36 100.0 37 .................................... ATATTTTCTCCAACTTCATGTTCTCCTCCTGGTTAGT 3145160 36 100.0 37 .................................... TCGATGGAACCCTTCAGATCATTCAACGCAGTTAAGA 3145087 36 100.0 39 .................................... TGGGATACGGTCCCAGGTCGAGAGACGTCCCCAACGTGA 3145012 36 100.0 39 .................................... TGGGATACGGTCCCAGGTCGAGAGACGTCCCCAACGTGA 3144937 36 100.0 37 .................................... GAGTCTGATCCGGAGGCCCTTGTGGGCCCCGGATAGA 3144864 36 100.0 38 .................................... TAAGGCGGTAAGGCCACCTTTCCGTATCATATCCTCCA 3144790 36 100.0 36 .................................... TCGAAGGCGCCCTCTTAGGCGGCGCCTTTTTGGGCG 3144718 36 100.0 39 .................................... AATAAGCTCGGAGGGTCCATATGAAATCGGACACCACGG 3144643 36 100.0 40 .................................... TGTTTAGGCCACAATGGGTCGCCTTATCTCATCTTCTCAA 3144567 36 100.0 40 .................................... TTTGCTGGAGATTCTAAAATCTCCAGCATATTGCCATTGA 3144491 36 100.0 40 .................................... AAAAAAATCAAAGTTCGTCCAGTAAATCGTCATCGAGAAG 3144415 36 100.0 37 .................................... AGAGATTTTTTCAAACCGCATCGCTCTCTCCTGGTTA 3144342 36 100.0 44 .................................... TCTCAAAGGGAGCCTCGATAGGCCCCGAGGGAATCGGGGCCTTC 3144262 36 100.0 37 .................................... TAGGCCAGGGTGTTCCAAGCAACTGAGCAATGCTCTT 3144189 36 100.0 38 .................................... CAACGAGTCAGGTACTCCGCCCGTTGGGTTTTTCCTGA 3144115 36 100.0 39 .................................... TCCGTCGGGACGGGGAATCTCCACCGTCTCTCTCTTCGT 3144040 36 100.0 41 .................................... CCAGAACCCGAAGTCTTCTTTGCCTTTGCCATGTCTCTCCT 3143963 36 100.0 36 .................................... CGGATAGAATTCCCAAGGTTGCGCCGGCCGGGATTT 3143891 36 100.0 37 .................................... GGTAGGCTCGTCCGCCGCCGCATTCTAGCCAGGACGA 3143818 36 100.0 37 .................................... GTGAGTCTTCCAGATATGCGAAGAAATCGGGAAATAT 3143745 36 100.0 37 .................................... GTGAGTCTTCCAGATATGCGAAGAAATCGGGAAATAT 3143672 36 100.0 37 .................................... ATATGCCAATCCAAATTTGAATCTAAGCATAACTCCC 3143599 36 100.0 41 .................................... GGGACACCGCCTCCCAAGCATCAGCGATAAACTCCGGGGGG 3143522 36 100.0 37 .................................... AAAACAGGGATTCTCGTCTGAATTGCTACAGCCATAG 3143449 36 100.0 39 .................................... CAAAAACGGGGGCGGAGTGGGAATCTCCTCCAGTGCAAT 3143374 36 100.0 37 .................................... GTTATCTCGTCTTGCAGAATGGCCTTGCGGTCATCCT 3143301 36 100.0 36 .................................... TTGACTACTCTGGTCAAACCCATGGGATCGTCCTCA 3143229 36 100.0 36 .................................... AGGTTCCGTACGTCAACCTCCCGCCAACGTGAGACC 3143157 36 100.0 35 .................................... CGTATCGGGGTCCGTATAACATCTATCCGCAGTAA 3143086 36 100.0 36 .................................... AGCTACCACGTGATAACCGTCGCCGTAATTGCCTGT 3143014 36 100.0 37 .................................... AGAAATGCCACGATTTCCTTGATTCTCTTATCCATAT 3142941 36 100.0 36 .................................... TGTTTCTTCTTATTACTCTGCTCTGTATCGCCGCGG 3142869 36 100.0 37 .................................... CGTGGTGCCGTAGTAGCGGACCTCGTCCCCGTGATCG 3142796 36 100.0 37 .................................... TTGAAAGAGCCTTGCTATTTTGTTCATGATGCTCTCC 3142723 36 100.0 37 .................................... TTGTCCTTTCGTAGTAAGCGGTGAACCTCTGCGTTTT 3142650 36 100.0 36 .................................... CCTGCCGGGGACCTTGATATAGCAGGTTAGTCTATG 3142578 36 100.0 37 .................................... CCTTCCCCGGAAAGCAATGTGCCCAAAGGCGCCCTGT 3142505 36 100.0 28 .................................... CTCTTAGGCGCCCTCTTAGGCGCCTCCT Deletion [3142442] 3142441 36 100.0 36 .................................... TGTCGCGGGGTGGTAAGCCCCGCCCTTCCGGTTCGG 3142369 36 100.0 35 .................................... TCTATGGCCAGAGCATACTCTTTCCGTAGCTGATC 3142298 36 100.0 38 .................................... ATCCTACGTTCCAGATTACGGATGTAAGTCTTGCTCCT 3142224 36 100.0 36 .................................... TTGAAGCAAGCTATGCTCCAAAGCGATTAGAAATTC 3142152 36 100.0 36 .................................... TCTTCTTCCCGGAGCCAATCTTCGATGTCAAGCAGG 3142080 36 100.0 36 .................................... CTATTAAATTTTATCATTCCTCCAGGGGAGAAATAT 3142008 36 100.0 38 .................................... CTCTTAGGCGGCGCCTTCTTAGGTGCCGCCCTCTTAGG 3141934 36 100.0 38 .................................... CCTTAGGCGGCGCTGGAGTCTCGATTATCTCCAGCATG 3141860 36 100.0 41 .................................... AATTCATTGACAGAGGATGCCGGGATAAGAAAAGTCTCAAG 3141783 36 100.0 37 .................................... ATGTAGGCATCCGAGCAGCAACACATCCCACACTTGG 3141710 36 100.0 37 .................................... TCTCCAGCCGCAGGCGCTGATTCTCGAACTTCAGCTT 3141637 36 100.0 36 .................................... TCTCAACTATCTTCCTCTGGTCATCAGTGAGGCTGT 3141565 36 100.0 36 .................................... TCTCAACTATCTTCCTCTGGTCATCAGTGAGGCTGT 3141493 36 100.0 37 .................................... TTGAAGTTCCCATTGGATATATCGGGTGTTAAGAATT 3141420 36 100.0 38 .................................... TAATGCCTGTCCCAAGTGCGTGCTGGAATGCTCCTGGC 3141346 36 100.0 33 .................................... CTCGAGCAAAAGCCCGAGCAGGGTTGCTGAGTC 3141277 36 100.0 41 .................................... GCGACACCGTCGCTGGAATTTGTTGCCACAGGTCCCTGAGG 3141200 36 100.0 37 .................................... ATTCGATCGAACCCTCCGCGGTACTTGATTCGATTCG 3141127 36 100.0 37 .................................... TGCATGGGCACCTCCAATTGATGTTGACGGACAGAGC 3141054 36 100.0 34 .................................... CTGATTGTTCAAGCCGTCACCGTCGATATGGTCG G [3141030] 3140983 36 100.0 37 .................................... GATGCTTTGCCCGCACCGCCTCCAACTCCGCTGTGAA 3140910 36 97.2 36 ........A........................... AGGGATCCCCTGCTGGAGCTTGCTGATGGCAGTTTC 3140838 36 94.4 0 ................................T.G. | ========== ====== ====== ====== ==================================== ============================================= ================== 114 36 99.9 37 GTCCGAAGGACGGCCCCGATTTGAGGGGATTGAGAC # Left flank : TCCTGATCGCCGGCAAGTAGGGGCGCAGCACCGCTGCGCCCCTACAGGACATGAGTCGCTCTTAAGCGCCGTTTGCGAACCTCCCTTACGCGAAAAAACGGACACTCAGTGCCAAAAGAGTGAAGGCTATTCTCAGACGGCTTCTCCGGTCAGGCAGCTTGATATCCGTTCGGGGGCGGAAGCTCCGCCGCGGCATCAGCTGGACCGCAAACGCTCGCCGTTTTCCCGTTGAAACCCATCCTCGGGGAGCCTCCCATCGGCGCGGTGCCGGGCCGTCCGCGCATCCCGGGGCTTTTCCCTGGATGCGGGATAACCTGTTGAAATTCAAGCAACGAGGTGAAAGCCATGCGCGGATTTCCAGAAGTCGTGGATACTCGGTCACTTAGCTGCCTTCGTGGGGGCGCCCGGAAGCCTGCTTGCGGGACCGGGCGGCGAAATGGGGGGATATGCGCGGATCCGCGTCTGCAACCCCTGGACAAAGGCGGCTCTGGCGGTGTAGA # Right flank : CCTGTCCGGCGCGGCGGGTGAATACGCGCTCGTCTTCGAGCCGTTGAACGAGGCTGGATCCGGCAAGCCGGTCATCGTAAATGTCTGGCGGGCGACACCAATTCCCGGAGCAGATCGCCTTTGGGTGAAGAGCGCGCATGAAAATAGGGTCGTCGAGTTTGCGAAAACGAAACCCTTCAAGGCTCGCTTTCTCAAGCATTTGCAGAGGCTTCGGGAATTGCTGGGCGGGCGCGATTCGGCGCGGCGAAAACGAACACCCTCATCGGAGACGGCTATGCCGGCCTCGAGGTCGACGGCAAGGCCCCCAAGGACACGTCTAAGAATTTGGCAGCGTTCTAAAGTGGTGACCTTAACCAAAAAGGTTAACGAAGGTCAAAAAATCCCCCTCTCTCCCCTCCCCTTAATCCCCTCCCACAAGGGGAGGGGAAATGGAATTTTGCATCAAATATTAGGTCTATTATTTTCTACGCTACCAAGAGTTTGTCCAAAAACAAGCTCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAAGGACGGCCCCGATTTGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 3 3163562-3160486 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 3163561 36 97.2 42 ....G............................... CCCAGTTGCTCTCTTTGAACCCCAGCACATAGGCCAGGGTGC 3163483 36 97.2 38 ....G............................... TAGATCGCGGAAACGCTCGTAGAGCCCTACCAAATCGC 3163409 36 97.2 40 ....G............................... CAAGGCCAGGTTGAAACACAAAGTCGGCTCACCCTGTACC 3163333 36 97.2 40 ....G............................... CAAGGCCAGGTTGAAACACAAAGTCGGCTCACCCTGTACC 3163257 36 97.2 37 ....G............................... ATATCAGCTCCAGCATATTCCCGTTTAAGAGGTGGCG 3163184 36 97.2 39 ....G............................... TTGATTTATCCTTCAAACAAAAAAGGCGAACTACCGCGG 3163109 36 97.2 40 ....G............................... TTACCGTCTTGGTATTCCTTATCGACCGATACGATGCTAA 3163033 36 97.2 42 ....G............................... CGTTTTGCCAGATACTCCTCGATCGCGTCGCCTATAAGTTCA 3162955 36 97.2 37 ....G............................... AAGACTGATTCTTTCTTGACTGACCCATCCGGCTGCT 3162882 36 97.2 38 ....G............................... TGTCCTACCAGCCCCATCGGGATGTTCACATCCGAATG 3162808 36 97.2 38 ....G............................... ATCAACGCTGTAATCTCATTTGTTTGTTCCAACGTCGC 3162734 36 97.2 37 ....G............................... AGGGCTTCTAGGGCCCCTACCGGAGACTTGTCAATAA 3162661 36 97.2 35 ....G............................... TAAAGGCCCTCAAGATCAATGTCCATTTCAGCACC 3162590 36 100.0 32 .................................... CTACCTGCGCCTCAAACGGAACCATCAACATG 3162522 36 100.0 38 .................................... GTGGTGGAATCCGGCAAGGTATAGTAGAAGGGGTTTGA 3162448 36 100.0 39 .................................... TCGGCCGGCTGAAGTTTTTGAAATTGCGCTCTCTTTTGC 3162373 36 100.0 37 .................................... GAATGCGGCCACGCTTGAGGGCCTGTCGCCGGACTCG 3162300 36 100.0 37 .................................... TTTGGGCAAATCGCAGTCTGCATAATGAAATCAATGA 3162227 36 100.0 36 .................................... ATCTTGATGTTATGCTCTGTAAAGAAGAACCCCTCG 3162155 36 100.0 37 .................................... TTTTTGGTTTCCAGCGTGGATGTATCGATAGTCGGCG 3162082 36 100.0 37 .................................... TAGATTCGGTGCATGGAGCGCAGGTAATCGCTGGAGG 3162009 36 100.0 42 .................................... CGCCTTCTTAGGCGCCGCCTTTTTCGGCGGCGCCTTTGCTGG 3161931 36 100.0 37 .................................... TATCTCGGCCGGCTGAAGTTTTGAAATTGCTGTTTCT 3161858 36 100.0 39 .................................... CGTTAAAGTCTTCGACCGTTTTCAGCTCCGGGAATTCTT 3161783 36 100.0 39 .................................... CGTTAAAGTCTTCGACCGTTTTCAGCTCCGGGAATTCTT 3161708 36 100.0 35 .................................... CGATCCGCGATCACCGGTGACAATAGAATGGATAT 3161637 36 100.0 38 .................................... CTTTTTTCCGAGGTGCTTGTCTTCGCGTCCAATTTCCA 3161563 36 100.0 43 .................................... AATTTTCTTCGCCGGCATGCGTGGCCACACATACGAGACTACG 3161484 36 100.0 38 .................................... TAAAGTGTCCCCGCGGTCGGCCTTCAGTATTTTTACTC 3161410 36 94.4 39 ....G...A........................... TTTTCAGCTATCAGCATTTCGTCCGTTGGAGTGGTTCCA 3161335 36 97.2 38 ....G............................... ACCAGTATCTTCCTCCTCTTCCTCCCCTTCTTCCTCCT 3161261 36 100.0 36 .................................... CTAGAGAGACCCCAGTTCGTAGGGCTATGTCGATGA 3161189 36 100.0 39 .................................... CGTTAAAGTCTTCGACCGTTTTCAGCTCCGGGAATTCTT 3161114 36 100.0 35 .................................... CGATCCGCGATCACCGGTGACAATAGAATGGATAT 3161043 36 100.0 38 .................................... CTTTTTTCCGAGGTGCTTGTCTTCGCGTCCAATTTCCA 3160969 36 100.0 43 .................................... AATTTTCTTCGCCGGCATGCGTGGCCACACATACGAGACTACG 3160890 36 100.0 38 .................................... TAAAGTGTCCCCGCGGTCGGCCTTCAGTATTTTTACTC 3160816 36 94.4 39 ....G...A........................... TTTTCAGCTATCAGCATTTCGTCCGTTGGAGTGGTTCCA 3160741 36 97.2 36 ....G............................... TCCCTCTGCACCTCGTCCCGAATTTTCTTCGGGATT 3160669 36 97.2 39 ....G............................... ATAGCCTCGCTAAGTTTCTCTTGCATGTTATTTCTCCCT 3160594 36 94.4 37 ....G....................T.......... AATCGTTGCAACCTTATCTGACATGTCCTTTACATCA 3160521 36 94.4 0 ....G..............................T | ========== ====== ====== ====== ==================================== =========================================== ================== 42 36 98.4 38 GTCCTAAGGACGGCCCCGATTTGAGGGGATTGAGAC # Left flank : GCTTCTCAGAGATCCTGCCCGACAAGGAAACGCCGGCGATCCGGATCCCTTGCCGGAGCGGGCTTGGCCGCGATCCTTGTTCCTGTAGGAACGCCCTTGGCGGCGATAGGGGTCGTCGGCGCGCCGGCTCCTGTAAAAAGGCTTGGATCAGGCGCCTTGTCATCCGTTCGGGGGGCGGAGGCTCCGCTGCGGCACCAGCCGGAGCGCAAAACGCTCGCCGCTTTCCCGTTGAAACCTATTCTCGAACAGCCTCCCAGCGGCCTGCAGCAGGGCCGTCCGCGCATCCCGAGGCTTTTGCGTGGATGCGGGATAACCTGTTGAAATCCAGGCAAAGAGGTAAAAGGCATGCGCGGACTGCCAGAAGTCGTGGATACTCGGTCAATTGGCTGCTTCCGGGGGGCGCTCGGGAGGCTGGTTGCGGGAACCGGCCGCAAGATGGGGGGGATATGCGCGGATCCGCCTCTGCAACCCCTGGACAAAGGCGGCCCTGGGGGTGTAGA # Right flank : TCCGCGCCTGCCTTGTAGAGGCAGGCGTCCATCCTGTATCGTCCAGATGGAGATAAACTTTGATGAACCAATGGAGGAGAAACAGATGGCTTATGGAGAAATGGCCTGTAAACGGCTTTTGCTTCTTGTCGGATCCAACCCCTTGCCCAATTACATCACGGCTCTCATCCTGAAACCTCAATCGATTTCTCTCTTCTACAGCCCGGAAACAGAAGAAGTGATGAAGTACCTTTGCAAAGCGCTGGAGGTTGCCCTTTCGGGTGCACACCTTGATGCCACATGCATCGAAGATGCGACCAGTGCGGCCAAGGTCAGGAACGCCTTCCCCAAAAATCTCCATGATTTTCACTTTCACTACACGGGCGGCACCAAAATCATGGCGGCTCATGCTCGGATGGCTTTCCGGGACGCCGGCGGCAAGGATGAACAGGCTTCTTATCTGGATGAGCGAAAAGGGGTACTGCGTTTTGACAATGGCTATGGACTCGATTTGGCAAAAC # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTAAGGACGGCCCCGATTTGAGGGGATTGAGAC # Alternate repeat : GTCCGAAGGACGGCCCCGATTTGAGGGGATTGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //