Array 1 85902-89297 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJMQ01000003.1 Streptococcus sanguinis strain BCC23 D8882_contig003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ======================================================================================================================== ================== 85902 23 100.0 48 ....................... TTAGCTGCTCGAAAGACTGGAAGAATTCTCTCAGGTAAGAACCCCCAG 85973 23 100.0 49 ....................... CGCTTTCTGCACCAACATAAGACAACCAACGATATGTAAGAAACCCCAG 86045 23 100.0 49 ....................... GGAAATAGGAATTTATTAACGAAAGATTCAAATTCTGTAAGCCACCTAA 86117 23 87.0 52 ...T..T.......T........ ATTTCTTTGCTTAGGTTTTGTAGTTCATTGGTCATATTGTAAGACACCCCAG 86192 23 91.3 53 .T.......A............. TATACAGCATCGTCGATACAGTCCGAACTCTTGAGATAGGTAAGACACCCCAG 86268 23 91.3 50 ........G.........A.... TTCTTAATGCTTGCTTTTTGGAACATTGCCTTTTCTGTAAGACACCCCAG 86341 23 95.7 51 ..............T........ GGGGTAAAAACAATGCAAAATGAACCAGCTTCATCACGTTAGAAACCCCAG 86415 23 95.7 49 ........G.............. GCAACATTGTATAAATGTTTTCCAATGTGATTTCAGTAATACCCCCCAT 86487 23 95.7 50 .....C................. GCTTTCCTGTAATTGATACGAGCAACCCAATGGATGGTAATAACCCCCAG 86560 23 87.0 50 .TT...........T........ TCAACAATCGTTGCAATAATTGCAAACAGAGTAATGGTAAGACCCCTCAT 86633 23 95.7 54 ..............T........ TTAAAGCCATTTTCAATCATTGTTTGAGTAATAGATGCTGTTAGAACCCCCCAT 86710 23 87.0 51 .....C..C......G....... TTACTCTTGGTTGTCTTCATAGCTCTTCTTTTCTTAAGTAAGACCCCCCAT 86784 23 91.3 50 ..G.....C.............. CGAAATTTCTTTCAACCTTTCAATAAACGGGATTCTGTAAGAACCTCCAT 86857 23 91.3 49 ........G.....T........ CGTCAACGTTTGCTACTTGCTTACCATCTGAGCCGGTAAGACCCCCCAA 86929 23 100.0 52 ....................... ATTATTAATAAATTCTTGAATAGTATCAAAACTGATAAGTAAGACCCCCCAA 87004 23 100.0 54 ....................... ATGCCCTTGCCGATTTTGTCTGCTACATTTTCTGGAATTGTAAGACCCCCCCAA 87081 23 100.0 51 ....................... TGCGTTGCATTGCGTTGTAATGTAATGCGTTTGTGTGTAAGACCCCCCCAA 87155 23 100.0 49 ....................... GAAACAGCAGATTTAAGACCTGGTGTAAATTTACGGTAAGACCCCCCAA 87227 23 100.0 50 ....................... GAAATCAATGTGATTCTAATCATGGTTGTCTTGTCAGTAAGACCCCCCAA 87300 23 100.0 51 ....................... ATACAAATATAAAACCTAAAATCAACTTAATCTACAAGTAAGACCCCCAAA 87374 23 100.0 53 ....................... GTTAAGTAGTGTTTGATCGTTAATACCTGATAAATCAAAGTAAGAAACCCCAG 87450 23 91.3 48 ........G.....T........ AAATCCGCCCACGGTCATTAAAAGCTGGTCTCTGGTAAGAATCCCCAT 87521 23 87.0 54 ..............T..A....T GAAATTAGATCTGACCATGTTTAAATACCTCCCACATATCTGTAAGACCCCCAT 87598 23 95.7 49 ..............T........ TTGGCTCCGTCGATTGCTTGGTCTACGGTCTTAAAGTAAGAAACCCCAG 87670 23 95.7 52 ........G.............. GTTGGATAACTTGAAAGAGATTAACAACATCATCATGTTAGAAACCCCAGTT 87745 23 82.6 50 ..CT....G.....T........ CTTCTGCCTTGGTACGATACCCTCGCTTGCTTTTCTGTTAGAAACCCCAT 87818 23 100.0 50 ....................... ACAGTACCAGTTATCTGATTTCTCAAAGGTCAGAGCGTAAGAATCCCCAA 87891 23 91.3 51 ........C.....T........ ACAACTCCATTAGTTCGTTTTGTACGCCACACATTTTGTTAGAACCCCCAG 87965 23 82.6 51 ..TA..........T....G... GTATTTGTTGGTATTTTGTTTTCAAATGGTACTACGTGTAAGACCCCCCAA 88039 23 78.3 51 C.....T..A.A...G....... ATATTCTCGAATTTTATATAGGCTTGTATCATACTGCGTAAGAATCCCTAG 88113 23 91.3 51 .A............T........ CTAACATTGAAAAACTACTAATCATTCGCATACTTCTCTAAGAATCCCTAT 88187 23 91.3 49 .....C.........G....... TGCCCTTCAAGTGCTTTAGGGTTGTGTAAGTCTGCGTAAGACCCCCCAA 88259 23 87.0 120 ........C.....T.....G.. CTTGTCGTGGTCGTCCAAGTGCCGAGTGTGGTCTTATAAGTCTCCATTTATCTTGAGAGATTACGGAAACTTATCTACGTATTGGTCATTAGCTTCAGCACCACTTGTAAGAACCCCCAA 88402 23 82.6 50 .....C..C.....T....C... GGATTGTTTGAATACACTTGTGTATCAAACGGATAGGTAAAAAGCCTCAG 88475 23 100.0 50 ....................... CGAAATTTCTTTCAACCTTTCAATAAACGGGATTCTGTAAGAACCTCCAT 88548 23 91.3 51 ........G.....T........ ATAATGTCGTCTTCCTCATCCTTAGAATTACTCTTTGGTAATAACCCCCTA 88622 23 100.0 51 ....................... CTCTTGCGATTAAATTGTAATTTAGACATATATCTCGTAAGACACCCCCAT 88696 23 82.6 48 ....G.T.GT............. ATAGTGTTGACTGGCGTAGTCGCTTGTGTAGCATGTAAGAACCACCAG 88767 23 100.0 50 ....................... TCATACTCAAACGAGTCTAATGCAGAATGAAATACTGTAAGAATCCCCAT 88840 23 82.6 50 ..CA....C.....T........ ACTTTGTTTGACAAAGTTATAGCTCGAATACCACCCATAAGAATCCACAG 88913 23 87.0 51 ......T.G.....T........ ATCTTGGTTATCCTTTCGGTTACGATTAAGTGAGCTGGTAAGAATCCCCAT 88987 23 95.7 51 ........G.............. ATACCAGGACGCTGTACTTTGAATGGACGGCGCATATTGTAAGCCCCCCAG 89061 23 91.3 48 ........C.....T........ ACTGGAATACTGTTTTCTGTCCAGTCAAAACCATCGTAAGCGCCCTAG 89132 23 78.3 48 CGTT..........T........ CAGTAATTCCACTCTTTAAATTCTGGGTTAAACCATAAGAACCTCCAT 89203 23 87.0 49 ...A....C.....T........ AAAGAAAGCACGTTCTTTTTATTTTTTAACTGCCTGTAAGACCCCCCAG 89275 23 87.0 0 A........A....T........ | ========== ====== ====== ====== ======================= ======================================================================================================================== ================== 46 23 92.4 52 TCACCTCGAGAGGGGACGGAAAC # Left flank : TGTTTTAAGTCAAGGAATGCTGAGGACTATATCAGCAGTTATACGGGAGAGTGAAGATGACTTTTTATAATCTTGATAGTGTCAGCAAGGAATTTGCCAGGAAGAAAACAAAGTTTTGTCTGGTTATTTATGATATCGTAAGTAATAAAAGGCGTTTAAAACTAGCCAAGCTTTTAGAAGGCTATGGTACAAGGGTTCAGCGTTCTTGCTTCGAAGTCGATATAGAAAAGCTGAATTTTGACCTTTTGATAAAAGATATAAGAGACTTTTATCAAGCCGATGAAGGAGACAATATCATCGTATATGTCGGGCATAAAGAAGAAACTGTAGTCTTTAATCCCTATGCTGGCGCTGAGTTGCTGGAAGAGATATTATTCTTTTAATCTTTAAATTTTGCTGGCTTCATGGTATAATAAGGATAAGTTTCAACTGGGATGTCAAACTAGATCTAGTGGTTTGACGCGAAGACCCTATACAAGATATGGGGTAAGAAACCCCAG # Right flank : CTGGGGGGATTATGATGCGATTTTTAAAATAGGATTAGATATTTAAGATAAGAAAAACCTTGACATCGCTTTCAAAATTTGATATAATAACAATCGTAAAAACAGTACTGATAATAACTAAAAAAGGGCGCCCTAGATTCGGTGAAAAATACTTTCACCGTTTTTAGGCGCTTTCTCTTATTATAGAAAGGAATGGAAATGTGAAGAAAATACGATTGCATCTTTCAAAGGTATCTTTGAAGAATGATGACTTAGTCTGTAAACTGCAGGGCTTTCTCATGGAGAAGCTGTCGGATGACTTTGCCTCCTTCCTCCATCAGCAAGAGACCAATCCATACTCGATGAATCTTCGTTCGGAGCGGGAGAAGTCTATTTGGACGGTAAACTTACTTTCGGAAGAAGCGGAGCAGCAGATATTGCCCCAGCTATTAAGTCTTGAAACGATAAAATTAGAGACTTATTCTGAGGAGATTCTGGTGAAGAATATCGAGATCCAGTCC # Questionable array : NO Score: 4.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:-0.40, 8:1, 9:0.39, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [21-43] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //