Array 1 270918-273692 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVIA010000003.1 Citrobacter braakii strain CB00064 CB00064_contig00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 270918 29 100.0 32 ............................. GTTAAGCAGAAAGGCGCAATTAACCGCATCCC 270979 29 100.0 32 ............................. GACCTGACAAAACAGGCCGCAAACCCGATTAA 271040 29 100.0 32 ............................. GCGTGAGGCTTTTGAAGACGGCTCATTATGGG 271101 29 100.0 32 ............................. GCGGCTATACGCCACTGGCAGCAATTCTTAAC 271162 29 100.0 32 ............................. CCGGGCATCCGGCGCATGCAGAGGCCTGCGAA 271223 29 100.0 32 ............................. TCCTGTGGAACCACATTCTTTTTCGCTCATTT 271284 29 100.0 32 ............................. AGGCAATCCCGCGCCTGTCTTGTTGCGCCAGT 271345 29 100.0 32 ............................. CACTCGGGATTGTTGAGGCTGCGCTGACGCCG 271406 29 100.0 32 ............................. TGTTCGCGGTGGAACGGCACCAAGAATGCCGA 271467 29 100.0 32 ............................. TTATTGCGCGGGTTGTGGAAATGAGCACTGTT 271528 29 100.0 32 ............................. GTGACCGTCACACGGCCATCAGTGACAGGGCC 271589 29 100.0 32 ............................. CGATCGTAACGGTTAGGCAGCTAATTTGTATG 271650 29 100.0 32 ............................. CGGGTAGTCCTAATCGATTGCCCTGTGTTGAA 271711 29 100.0 32 ............................. TTGATACACTCATTATATATTTCCTTGTCGTG 271772 29 100.0 32 ............................. GCGATACCGCCAGGCTGATTTTTTCTGGTAAT 271833 29 100.0 32 ............................. TACGGTGATGCAAAATCAGCCCCGCGAAAATC 271894 29 100.0 32 ............................. CTATTCCTGCATCAACACTTGCGGCAAGTTGA 271955 29 100.0 32 ............................. TACAGGCAACCATTCAGGGGAGTGCGGGTCAG 272016 29 100.0 32 ............................. TTAATACGTACTATTTAAACAGCGCTACACAA 272077 29 100.0 32 ............................. TCTCGTACTATTTTGGGAAACGGTTGGTTGTT 272138 29 100.0 32 ............................. ATCACGCAGAATACTTTGGGTTCTTCGAAACA 272199 29 100.0 32 ............................. TGGCTGGGACCTCTTCCGGGACTACTGTCCCA 272260 29 100.0 32 ............................. GATGTGCGCCTGCACGATTCCCGCCGAGAGTC 272321 29 100.0 32 ............................. CCATAGCCATACAGCTTGTTACCATTTGGGTA 272382 29 100.0 32 ............................. CATTTGGTCATGTTGATCGAGGAACTACGCCA 272443 29 100.0 32 ............................. CCGCAGAGAGGCGCATAGCCGAACAACGTGAA 272504 29 100.0 32 ............................. TCATAACCTGTATTCCTACTCCTGAGGGAGTA 272565 29 100.0 32 ............................. TCCCGTTTGAAGTGAACAGGGCAAAATTGCCG 272626 29 100.0 32 ............................. GGGATAGATCAGGTTCCAACCATTCAGGAATC 272687 29 100.0 32 ............................. GGTTGCATCTAATCTCCGCAATGATTCAGAAA 272748 29 100.0 32 ............................. CCAATGTTGGCGCGGTGTTTTTCCATCATGTC 272809 29 100.0 32 ............................. CAGTCCATTCACGCATAGTTAATCCTCCGGAG 272870 29 96.6 32 ............................T GGCGCGCACCATCTCAGCGTTAAAAATCATTC 272931 29 100.0 32 ............................. TGAAAGCGGTGCCTAATTTTGGATTCATTGGC 272992 29 100.0 32 ............................. GTTACGAAAGAAATACGCGCACACATTCAGAG 273053 29 100.0 32 ............................. TCGATTCCAGTTGGTCAGGTAGTTGGACGGGC 273114 29 100.0 32 ............................. GCCTCAACGTCAGTGAGTGGCAGCAGTGCCGC 273175 29 100.0 32 ............................. AAAAATAAATGAAAAATAATTTGACGTGTATT 273236 29 100.0 32 ............................. AAACAGCAGCGTGATTTTCACAGTGACCAGAT 273297 29 100.0 32 ............................. CGCGTTCGTGGGCTGATAAATCTAGACAGGAC 273358 29 100.0 32 ............................. AACGCCGCAAAAGGCGCAGCAACCGTGCAGAG 273419 29 100.0 32 ............................. CCAGACGCCAGTGGGAATGTGGCAATTAACGT 273480 29 100.0 32 ............................. TCGACGACAGTGCGCTTACGTTCATCAGATGG 273541 29 100.0 33 ............................. TGGATCGCAGAGGACGACGGAGTTCTCAATCCC 273603 29 100.0 32 ............................. GTCATCGGCACCGGCTTCAGCGTCAGCGCCAC 273664 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTGGCAGCCGGTGAAATAGATCCCCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAGCCTGAATTTTTGGGTGACGGTGGCCATCGGGGGCGTGGCGGATGAGTATGGTTGTCGTGGTAGCGGAAAACGTTCCGCCGCGTCTGCGAGGACGTCTAGCTATCTGGTTACTTGAAATTCGTGCAGGGGTTTATGTGGGGGATACCTCTAAGCGAATTCGGGAAATGATCTGGCAACACATCACGCAATTGGGCGGAACGGGAAACGTTGTGATGGCCTGGGCGACAAATACGGAGTCAGGTTTTGAATTTCAAACCTGGGGAGAAAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTGGTCTCTTTTCTTCCTGTTGAAAATCAATAAGTTGAATGTTCTTTAATAAAATGGAGTTGTTATAAATAGGTTGGTAGATTGTTGCTTGCTAAAAAATGTAATAGAAACCAGTTATATATGTTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGAGCTGGATGAGTTACGAGGTTTTTTCTGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCTCGGCTACGGTGCTCTATCCTTCCCGGCAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCGTCTTTCTTGCCCAGATTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTCCCTTTCGGATAGTTTTTGTTCAGCCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGATCGCGCGTCAGTTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGTAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //