Array 1 213580-212605 **** Predicted by CRISPRDetect 2.4 *** >NZ_SQBQ01000047.1 Escherichia coli strain EEIVKB65 NODE_284_length_249796_cov_48.273384, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 213579 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 213518 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 213457 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 213396 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 213335 29 100.0 37 ............................. CCGCACACGTCGAGCTGGTGGGGATTAANNNNNNNNN 213269 29 96.6 32 N............................ GCTGGCGCACCTTACGCAAAAATAGACGTAAA 213208 29 100.0 42 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCNNNNNNNNNNC 213137 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 213076 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 213015 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 212954 29 100.0 40 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATGNNNNNNNN 212885 29 93.1 32 NN........................... CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 212824 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 212763 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 212702 29 96.6 40 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCNNNNNNNNNN 212633 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================== ================== 16 29 98.5 34 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //