Array 1 27057-22005 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMWE01000034.1 Streptomyces djakartensis strain JCM 4957 sequence034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================================================== ================== 27056 33 69.7 28 .A.G........AG......A...C...AGA.T CCGACAGGATCGCCTCGACCGCGGCGAT 26995 33 78.8 27 .C.....T.A..........AA........TA. GGTCCGGTTCACTCGCCGCCGCGGCTC A [26966] 26934 33 93.9 28 ...............................AG TGTGGATGGAGATGTCCTGCACTCCGGC 26873 33 87.9 28 ......................C......C.CG AGCAGGAGGGCCGGGCCAGGTGCAACGG 26812 33 90.9 29 ...........T...................CT CGAGCCACACACCGTTGTCCCGGCCACCG 26750 33 93.9 28 ...............................CT GAGATGAGATGCGGGCCCGGTCGCGCTC 26689 31 75.8 28 .....T...-...........-..C....ATCG TCTCCTGCACGTACTCCAGCGCGGGGTT 26630 33 90.9 27 .................A......C....C... CACGTCCGGCCGTGCCCTGATCGACGT C [26601] 26569 33 84.8 28 ........................CA...C.AT CGAGGCCGCCCACGACGAGCGTCGCAGC 26508 33 87.9 28 .....T...A..............C....C... CGCCCGAGGCAGACCTCATCCGCCTCGC 26447 33 87.9 29 .C......T....................C..A TCACGGACATCACCCCCGTGCCCTATATC 26385 33 87.9 28 ........G...............C....A..T CCAACAACCAGGATCTGCACGTCACCAG 26324 32 78.8 28 .............G.......A-.C....CG.G CCACCGTTCACCGATCCCTGTGCCGGGC 26264 33 84.8 28 ........................C....CTCA AGGACGTGCGGCTGGAGCCGAACCGGGT 26203 33 90.9 28 ........................C....A.T. AGCCCTACTACCCGAACGTGGTCCCTCG 26142 33 90.9 28 .............................A.CG GCCGGACGCTAGCCAAGCGCGGGCACCG 26081 33 93.9 28 ..............................T.T TCAGCAGCCACGAGTTGCGGCGGAGGTT 26020 33 93.9 26 .......T.....................C... GATCAGGTGCCAGCGGCAGGCGCCGC A [25990] 25960 32 78.8 28 .C.....T.............-.......GACT GACCATGAGAATCTCCCGAATCGCCAAG 25900 33 84.8 28 .C......G.........T..........G..A AGACCGGCGCGCCCTTCTCCGTGCGGGC 25839 33 93.9 28 .............................AA.. CCCACAGCGACTCTGGCACGAACCAGGG 25778 33 87.9 28 ......T......................G.AA TCCACGTCACTGGTGCGCCACTCGTCGG 25717 33 90.9 28 .............................GAC. CGGGAAGTGCCCATGCGTAGCCGCCTCG 25656 33 84.8 28 ............A...........C....GG.T CGCCCCAGTCGTGCGACCAGAGCACTGG 25595 33 90.9 28 .............................C.CA CCGACAAGGCCGGCATCCTCTAGCAGGT 25534 32 81.8 28 .C...................-..C....A.AG GGCGGCTCATGCCGGGACCTCCCCGGTG 25474 33 90.9 28 .............................AA.A CCGCCGCCGACTTCCTGGGCCTGTCGAA 25413 33 87.9 28 C..T..........................A.T CCGCGTGCGAGTCGGTCATCAGGATCGT 25352 33 90.9 28 .....G..............A........C... TGACGGTCACCGCTAGCCGGTTGAGGGT 25291 33 81.8 28 ..................A.....C....CAAT CGACCGGCCCGGCCTCTCTGAAGCGCTG 25230 33 93.9 28 ............................A..A. CGTCCGTCTCGCAAAGGGCAAGCCGGCC 25169 33 84.8 28 ............AC....A...........A.G CCTGTGAAGCTCCCGGGATCTTCTGCGG 25108 33 93.9 28 ..............................A.A GTCCGGTGTCGACATAGAGGCTGTTGAC 25047 33 90.9 74 .............................CG.T GGAAGCTCCGGGGGACCAGCGAGCCCGAGTCCTCCCGTTCCGCGATCGACTCCACCGGCAAGGGCGCAGCGTTC 24940 33 90.9 27 ................T..C........A.... GGGGTTGAACAGCAGCCCATCGCCGAG T [24911] 24879 33 90.9 27 ...........T.................A..T CCAGGACAAGGTCGCGGGCCTGCCCAA A [24850] 24818 33 93.9 27 .........................G.....A. CGAGGACTACGACCTGCTCGACAGCAA T [24789] 24757 33 81.8 26 ...T..A.........A........C...CG.. ACCGTCTACCTCCTCGGGTACGGTCG AG [24727] 24696 33 84.8 40 ........T.......A............GG.G GTGTTCCGTCACCTCGGAGGATGTCCACGTACCCGGCGTC G [24669] 24622 33 90.9 28 ....C...................C.......G TCGACGAGCCGGGGTTGTCCATGCGGGC 24561 33 90.9 28 ............A..................CG TGGGCGCCGACTTTTGGACTGAGGCGTA 24500 33 87.9 28 ..........................T..GTC. ACGAGGCCGGCGCTTTCTGGGATGCGGC 24439 33 87.9 27 ........T.T..................A.A. CGCCTCGATCTGCAGCACGACCTTGCC A [24410] 24378 33 81.8 10 ....G..........T...C..C...T...T.. CCTTCTCGCC TCAAGAAGCA [24345] Deletion [24336] 24325 33 100.0 28 ................................. CGTTTGTCGGGGCGATCGCGCTCGCCGA 24264 33 87.9 28 ..............A.....C.........G.G AGGCGGGGTTGTCGGGGTTGCCTATCGC 24203 33 81.8 26 .........A.................GAGGA. TACGCACGATCGAGAACGAGGCGCGT 24144 33 84.8 27 ....CT..T...........A...........A GTCCAGCTCGCGCGCCGAGGCGCTGCT A [24114] 24083 33 87.9 28 ........................C....GA.G CAGCATGGCAACCCCCACGATCCCGAGC 24022 33 87.9 28 ...............A..C..........GT.. CCGGCTTCCTGGAGGGCATGGTCTTCCG 23961 33 81.8 28 .......T......A......A.......C.CG ACGGGGTCTACATCCTTCACTGGCTGGA 23900 33 84.8 28 .............C..T...A........G..A AGAAGCCTTCCAGCCGGGGCAGCACCTG 23839 33 84.8 28 ..............T.....C.G......CA.. TGTTCCGGTCCGTGGCGGAGGTGAAGCG 23778 33 84.8 28 ...T..........T..............GT.A CCGCGTACCGGGCGGCTTTTTCGGGGTT 23717 33 90.9 28 .............................GT.G CCGTCTACGACACCCCAGACGGCATCCT 23656 33 87.9 28 ...........A.................CG.G TGGAGGCGATCAACTGGCAGCACCGCGC 23595 33 90.9 28 ........................C....AA.. GCGCTACGCAGGACCACTTGGCGCACCT 23534 33 84.8 26 .......T..........A..........CG.G GGCCGGGCTGGTAGCCGTTCCCGTCA 23475 33 81.8 28 .C.......A.......A......A.....TC. GTCGCACGCAGGCCACCGCCTCGGTCGC 23414 33 84.8 28 ............AG...............CT.A TCAACGGCCAGTCGGTGTTTGGCGTGGT 23353 33 81.8 28 .G............A...A..........C.CA CGACCTCCTTCTGACGGTTCATGTCCTG A [23338] 23291 33 84.8 28 .........................C...GTAG ACAAGGCCGTGCTGCACCGCTTCGCTGA 23230 33 81.8 28 .............GT.........C....AAT. GGTACGGCGTCGGTGACTACCTCGTCTT 23169 33 84.8 28 ..............T.......C......CG.T GCCATGCCACGGTTTGGGACAGGCGCGC 23108 33 93.9 28 .............................G.T. TCAAGTCGGTGACGGCCGCGTGGCGGCT 23047 33 93.9 28 ..............................AC. CCATGGACTTCGTGCCGGGGCCCCATGA 22986 33 90.9 29 .............................GT.A CGAGCAAGGGACAGGGCCGCGCTGATCGT 22924 33 87.9 28 ......A............C.........C.C. AGACCGGAACCGGTAGTGAACGGTCCCT 22863 33 90.9 63 ..................A.....C.....T.. CGAGACGGCGCACGGCCTGAACGTCTCGTCCTCCCCGCGCGGTGGGGAATTGCCTGTCCGGCC A [22834] 22766 33 78.8 28 ....AGA.G..G.................CG.. TCACGGAGGGCCGACAGGCCAAGGGTGC G [22763] 22704 33 90.9 26 ...................C.........G..G ATCGACCCGAGCGCGTCCGTGTCCGC 22645 33 78.8 28 AG...................A......ACA.A GCCCGCGTGCTCCAGCTCTTGCCCGAGC 22584 33 90.9 28 ............................TCT.. CTCTGACACTTCTGTGGGACAGACGGAG 22523 33 87.9 28 ........G....................GT.A TCCGCCCGCACCGCTGCCCCGAGTGCCG 22462 33 81.8 23 ...................T.T..CAT..C... GTAGACGGTGCGGTCCTGCTCAA CC [22438] 22404 33 81.8 28 ...GC........................CTCA AGAGGGCGTCGGACGGGGCCACGGCCGC 22343 33 90.9 28 ............T................A..T CCTCCCCGATTTCCCGGAGGATCTTTGC 22282 33 87.9 27 ...............A........CA...C... GGAACCCGGGGTGACGCTGGTGGCTCA 22221 33 93.9 27 .............................A.A. GGCCGCCGAACTCACCACCCGCATCGG A,C [22191,22211] 22159 33 93.9 27 ...............A.............A... GGCCCGGCTGAGCAGTACGTAGTCGAG 22099 33 87.9 28 ...........A......C..........AG.. CGGGTACGCCCGGGACGGGCGCCACGGT A [22080] 22037 33 78.8 0 C........A......T......C.....A.CG | ========== ====== ====== ====== ================================= ========================================================================== ================== 82 33 87.3 29 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCGC # Left flank : AGCAGCAGCGGGCCGAAGCCGTCGCCGCGGTCGAGGAAGCCTACGAGGGCACGTCGGCCGACGAGGTCCCCGCCGGGATGGTTCAGGAGCTTGAGGACGCGGTCCGTGACTATGCGGCGTCCGAAGCTGCGTACCTGCCGATCGAGGTCCGCCGTGAGTCCTTCGCCCTGTTCATCGCCACCATCGTGTTGAGTACGCTGATGACGCTGGCGTTTACCAGCGACACCGCGGATGGTGTGCTGACCAAGGCCGTGGAGCTCAGTGTCCTGGCCGGAGTGTCGATGGTCACGGCCGGGAAGGCGTGGGACCGCTACAGCGGTATTGAGCAAGCCGACGGGGACGAGAGAAGCTAGGCGCCACACATAACAGACCTCCGCGGCTGCTCCGGGCAACTACCAGGCTATGAGGGGAACCGCCGTCGCCCACATGCAAGGGCCCGCAGCCGCAGCTCTGCTGGGCGCCTGGCTCGCCACCGACGTTCTTCGCTCGCTGGCGCCGCA # Right flank : ATGACAACAGGCACTCCCCGCCCGACGCGGGGGTGGGCGCGTGTCTCTGGACAACAGGGGGAAGACTCCCCACGTGGGGGAAGATGTTTGGGTACCAGCCGTCACGGCCGTCGTCGCGGCCGCGATCGGCTGGGCTGGGGCCCGTGCGCAATCACGGAGTGGGCATGCGCAGGCGAAGGCCGCTGCCGAGGGGGCAGCTGCCCAAGTTCAAGCGGTCGAACTTGAGTTCCTGCGGTCAAGCCGTGGCAGTGCAAGCAGCGTTGTTGTCGCCGAGGTGCTGCGTTTCGAGAAGCGGCTGACCGCCTTCAGCAACGGATACGGTCCTGGTGCCAAGCGCCATCCCTTTGCAGCGTGGATTACAACTGAGCAGCTACACGACATGCTGGATGCTCCTCACGCGCCCTATCGGACACGCAAGCAGTACTACCTGGACCTTGTCGCGACCTTAGGCCGGCTGCGGCTGGCTTGTGCCGTGCTCAACTTGCACGGACCAGCCGAGA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.36, 5:-1.5, 6:0.25, 7:-0.10, 8:1, 9:0.02, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [59-49] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 32567-28081 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMWE01000034.1 Streptomyces djakartensis strain JCM 4957 sequence034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =============================== ================== 32566 33 93.9 28 ..............................C.C CCAGGATTCCGCCGGATTCGAGGAGCTG 32505 33 90.9 28 ........................C....T..A TCGGTCGTCGTGTTGGGTCCGACCCGAC 32444 33 90.9 28 ..............................CTT TTCCACCATGGCCGTGAACTTTTGTTGC AGGACGCAGC [32424] 32373 33 87.9 28 A.......................C....GC.. CTCAGACAAACCCCGGTTTCCGTGAAAG 32312 33 84.8 28 .................A..........A.CCA CGCCCACCGCAAACCCGCCCGCACCCGA 32251 33 90.9 28 .............................T.CA GGTAGACAAGGGCGCTCGGCCTGTGGAT 32190 33 87.9 28 .............................TCCC CCTCAACGCGGACCCGCTGCGCATCGGC 32129 33 90.9 26 ..........T...........C.C........ CCGCCGGCATCCACCACGAGCCGTGC AA [32099] 32068 33 90.9 26 ..............T.........C.....T.. GGCAAGGACCCGTTCCTCGCGGTCCT GG [32039] 32007 33 87.9 28 C..T.........T................T.. GCACCGTCCCCACCGCGATGATCCCCAG 31946 32 87.9 28 ...-.........................TT.T AGCCGACCCCGGACCAGCCCTGGCCGAT 31886 33 78.8 28 ................T.......CG...GCCA TCGGCTCCAGCTCGTGGGCCAAGATGGT 31825 33 93.9 24 ............................A...C CGGTTTGGTTGATGTCCCACCGGT CCG [31794] 31765 33 84.8 28 AG......T....................G..T CCGACCGGATCGCCTCCACCGCGGCGAT 31704 33 84.8 28 .C......................C....ATC. CAAGCGTCGCCGACTACCGAGGCAGCTT 31643 33 87.9 28 ..................A..........TTC. CCGAGGACTACGACCTGCTCCACAGCGC 31582 33 81.8 28 ...T............T...A...A.....GA. AGTACGTCCGCCGCCAGCGGATCGAGCA 31521 33 90.9 28 .......A.....................T.C. TGGCCGTGGCCAGGCCCGAGAGGGTCTC 31460 33 84.8 28 ...............AT.....A........CA TCAGCGTCGACCTGTTCCTTGCGGCGCT GG [31435] 31397 33 100.0 28 ................................. TCCAGGTGACGTCACCCTGGGGGTCGAG 31336 33 90.9 28 .............................GT.C ACTGAACGCCCGTCGGCACAGCGGCCTT 31275 33 97.0 28 ...............................T. GCGCAAAACTTAACGGCGCGTGGCCTTG 31214 33 90.9 28 .............................ATC. GCGCCGGGTACGTGCGCACGATCCGCAC 31153 33 90.9 28 .............................GT.A CCCGGCGTGTTTCGCGTCGCTCGACCAG 31092 33 100.0 28 ................................. CCCGCGACCTGGCCGCGCTCGTCTCAGC 31031 33 90.9 28 ...................A..........C.T CAGACGTGGAGATCCTGATCCTGTGGGT 30970 32 87.9 26 .........-..A................T.A. GACCATGGCGAAGGGTGAGCCGCCGC CG [30941] 30910 33 90.9 28 .............................AT.A TCAGGCGCTGGCCCGAGGCGATGGAGCA 30849 33 93.9 28 .............................A.C. ACGGCTCGACGCGCGACGTGGACGTGCC 30788 32 90.9 27 A....................-..........C TCGTGCCGGTGCCGGGCTGACACACCA 30729 33 93.9 28 .............................TC.. CGACGCGACCCTGCGGGACGAGCTTGTT 30668 33 84.8 28 .C.T....T....................A.A. CCGAGCTGGTCGCGCAGAAGCTTGTCGC 30607 33 90.9 28 ........................C....AT.. TCTCCTGCACGTACTCCAGCGCGGGGTT 30546 33 84.8 28 ....................A........TTCA CCACCCGCTACCGGGCGTCCGGCAGGGT 30485 33 93.9 28 ..............................C.T GGGAGGCGTACACCGGCCCGGACGGACG 30424 33 90.9 28 .............................ACC. CCGACACCCTCGCCGAACTCGGTGACCT 30363 33 93.9 27 ...............................TC TCCCGACTCGGAGGCGTCCGCAGAGGC 30303 33 90.9 28 .............................AT.T CCGAGGAGGACGTCAAGGAGCTCACGGG 30242 33 84.8 24 ............................CTTCT CGCGGCCCCCGGACCTGGCTTGCG 30185 30 75.8 29 .........T....T.T---....G....G... CGCCCGCGTGCAGTGGCTCAATGGGGCTC 30126 33 87.9 22 ......................C.......CCA TCGCCTTCGCCCTGCCTGACGG C [30117] Deletion [30072] 30070 33 81.8 28 .G.T....................C....ACT. AGGGCGCAGTGCGAACCTTGACGGTACG 30009 33 84.8 28 ...T........TT...............A.T. ATCTGGATCATTCTCGCGGCTGGGCTCG 29948 33 97.0 28 ..............................C.. TGGCCATGGGCTCCTCCCAGCAGCCCTT 29887 33 84.8 28 ..G..........T.............T.TG.. TCATGATGATGCGGAAGTCGCCCGCCAG 29826 33 90.9 28 .............................TC.T TGAGGCCCAGGGGGCGGTGCTGGTTGGC 29765 33 84.8 28 .............T..............ATTC. CCGAGGACTACGACCTGCTGCACAGCGC 29704 33 87.9 28 ...T....................C.....C.T TCACGTGGCAGTTGTCCGCCATGACCGA 29643 33 84.8 28 .............G...............TGCT GGCGTCCGCGTCCGGCCGATGCACCGCG 29582 33 84.8 28 ..................A.....C....AC.T TGACGTTGTGGTTGCTGCGGCCGGGTGG 29521 33 87.9 28 .............................TTCA CGGTGCACAAGACCACGAAGGGCGCGAC 29460 33 81.8 28 ........T..T.................ATCC TGACGTCGGTCGGAAGAAACGTCCGGCA 29399 33 87.9 28 ..............A..............G.AC TTCCGCTTGTGCCGGGCCATGAGGCCGT 29338 33 90.9 28 .............................G.AT GGGGCGAGATGGTCACCCTGTTCGTCGC 29277 33 87.9 28 C............................AGT. TCGACGAGCCGGGACTGTCCATACGGGC 29216 33 93.9 28 ........................C....T... CCGCGAACTGCTTGGCCTTCTCCCGCTC 29155 33 90.9 28 .............................GTC. GACCGAAGGGCAACGCCGAACGGCACTG 29094 33 90.9 28 ............................C.G.T GGCTCCCTATCTCGTTCCGGTCGACGGC 29033 33 90.9 28 .............................GT.A TGCGTCCGCCGTCGTTGTGGTGCCAGAG 28972 33 87.9 28 ........................C....TC.A CCACATCCTTCCCATCGCCCAGGGCGGT 28911 33 93.9 27 ........T.....................C.. AAGCGCGTCGGGTGGATCGAACCGAAC G [28883] 28850 33 81.8 28 .....A.G.....T...............TCC. AGACGTTCCGCAACATCGTCATGGGCGT 28789 33 69.7 31 .............T........GAGGGG.GC.T TTGATGACGGCGAGGGGTGGAGGTTTCACTT 28725 33 87.9 28 ........T...............C....T..A GGTGCGCCGGCGGGTTGGGCACGTACCC 28664 33 87.9 28 A............................TC.C CGCTCTCGCTGAGGGGCACGGTGAATGC 28603 33 87.9 28 .......G.....................GG.A AGTGACCATGCAGAAGCGCTCGATGACC 28542 33 93.9 28 ..............................G.T AGAGGCGGACCTCCTCCGCTACTACAGC 28481 33 84.8 28 .C............T..C...........T.C. GCCAGTGGACGGTGTCCCCGTACTACTA C [28469] 28419 33 84.8 28 ..............T..............TGCT GATACCAGCGGATCCGCTTGGCCTTGAT 28358 33 87.9 28 .....................A.......TC.A CGCCGAAGTGGGACTCCAGGGAGGTGGA 28297 33 90.9 28 ........................C.....CC. GCGAATCAGACCCAGTGAGCGCTCCGGC 28236 33 87.9 28 .....................A.......GT.A CCAGGTAGGCCTGACCGCCCTGGTGCAG 28175 33 87.9 28 ....A........................A.CT GCGACAGGAAGTACACCTCGGAGAGGAT 28114 33 78.8 0 .............G.............GTTGAT | C [28100] ========== ====== ====== ====== ================================= =============================== ================== 74 33 88.5 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCAGG # Left flank : TCTCCAGGCGACGACAACGCCGAGATGAACGCACGACCCTCCCGAGGGATGTGGCGCAACCTCGGCCCAGTCTGCGCTCTGGAGATGCAGTGTCCCGGTTCCTGCACAGGTTCGGCTTGCGCCGTGAGGTCCTTCTCGGTACCTCACGCGTAGTGGTCAGCGCGGTGATCCGTGCTCTGATCAGCGAACTCGTCAGCTGGCTCTTCTGAGCCAACGGTGACGGACCCCAGGGGTCCGTCACCCCTTATGTGCAAACGCCCCCCGCTGGCCGAACACATTCTGCGCAGCCGGGTTACGCCGCAAGACGAGACGTCCGGCTACAAGCAAACGATGCCGACTCCACGCGAGCGGAGGTGACCCTGCCCTCGCTGCTGCGCTGGACGGCACGCATCGCCTCGAGCGTGTCGACGAATGAGGGCCTGGGCGTGCAGCAGGGCCCCAACAGCACGCTCGTGTCCTCCTTCAACAAGCTGGCCAGGTGGCCCGCCCCTCCGACACTT # Right flank : CAGGTGGTCTGCCGCGCTCCCTGGACGTCCTCCCCACCGCCACTCGGTGCTGGAGCACACGCTATGCCCGAGCGCGTGGAACGTTCCCCCGCTGTCCGGACGGTGTGACAGGGTGCTCGACATGTCGAGCACACCACCAGAGCTCTCCGAGGAAGACCTGGCCCGCCTGCGTGAAGCCATTAGCCGGGCGGCGAACCCGCACCTCCCCCGTCTTCAGGAAGCCATGGCCCGTATGCAGGCCGATCAGGAAGCGCAACTGCGCCTGGCGGCCGCCCCCATGGCACGCATGCAGGAGCAGATACAGCGGCTCATGCGGGAGGTCATGGCGCCAGCCGAGGAGGCGCGGCGGGAAATGGTCCGTCAGGCGATGGCCCAGTGGAGCCACGGCTGGCGTCGTGCCTGGGATGCGCATCTTCAGCAGCAGAACCTCACCGCAGCGCGGCTCGCCGCCCAGGCAGCTGTCCTTGACACAAGCCCACTGAGTCGGGTGCTTCGGGACA # Questionable array : NO Score: 4.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.42, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.04, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [37-43] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 3 43465-44836 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMWE01000034.1 Streptomyces djakartensis strain JCM 4957 sequence034, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43465 29 100.0 32 ............................. ACCGCGCAGGCGATGGCGCCGAGCGCCGACAT 43526 29 100.0 32 ............................. AGCCAGGAGGTTCCCGAGGGCGCCAAGGTGCT 43587 29 100.0 32 ............................. GCCATGGCCTACATCTACTGACACCGCACGGC 43648 29 100.0 32 ............................. ACCGCGCAGGCGATGGCGCCGAGCGCCGACAT 43709 29 100.0 32 ............................. CTGGTGCAGTGCTGGGAAGCGCTCAACGCGTG 43770 29 100.0 32 ............................. GTGAGCGGCTGATGGCGCAGGTCCGCGTGATG 43831 29 100.0 32 ............................. CGCCCCGGGGTCCCGTCCGGGTTCGCCCATCC 43892 29 100.0 32 ............................. CATTCGGCAGAAGGTAAGGCGCGCGGTGGACC 43953 29 100.0 32 ............................. CCGTCGTTCGTTGAGCAGCCGTCCGCCGATGC 44014 29 100.0 32 ............................. CGCACCAGTACCGGACAGCGCTGCAAGGAGCC 44075 29 100.0 32 ............................. AACGCGGCCACTTCATGGCCAGATGCGAACTC 44136 29 100.0 32 ............................. GACGCCCTGGACCGGATCTTCGGGAGCTGACC 44197 29 100.0 32 ............................. CCCGCTGGCACATCGACCTCGTCGCCACCATG 44258 29 100.0 32 ............................. GGAGTGTCGGCCGCTGAATAGCCGTACCGTGC 44319 29 100.0 32 ............................. AACCCGCCCGGGTAGGCGAAGGAGTCCGACTG 44380 29 100.0 32 ............................. ACACCCAGGCCCGCCGCGGCGGCTACGTCTGG 44441 29 100.0 32 ............................. CCAGGGCGCCCGCCCGGACCGCGCGACGGTGA 44502 29 100.0 32 ............................. ATCGCGGTGCGTGTCGACTCGATCGGCCTGTC 44563 29 100.0 32 ............................. TATGCGCCCTGTTCGGACGGTTCGCAATGGAA 44624 29 96.6 32 ........T.................... GAGGGCCAGGACTTCCAGCCGCTCGTCCCGGC 44685 29 100.0 32 ............................. ACGCCCACGATCGACGTGTGGGCCGCCCAGGC 44746 29 100.0 32 ............................. CCCGGCGTGTTGATCTCACCGGCGACGAGCGT 44807 29 93.1 0 ....................C.....G.. | A [44831] ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.6 32 GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Left flank : ACGACGTCCAATCCCTGCTTACCCCGCCCCACACCCCCACGATCACAGCCAACGACGACACCGATGACGAACGCACCGAACGGCGCGACGACAAATGGTCCACCTCTGGGACCCCAAAGCCGGAGTCCTCCCTGCCGGCGTCAACTACGCCCAAGGAAAAGACTGATGCCCTCCATGGTCGTCATCGCCACCACCGCAGTCCCCGACCACCTGCGCGGCGCCCTCAGCCGATGGACCAGCGAAGTAGTACCCGGCATCTTCGTCGGCAGCGTCTCCGCCCGCGTCCGCGACCAACTCTGGCAGGCCGTCACTGAAGTTGTAGGTAACGGCGCCGCCATCCTCATCCACCCCACTGACACAGAACAGGGCTACGCCATCCGCACCGCAGGAACCCGTCGCCGGATCCCCGTCGACTTTGACGGACTTACTCTGATTCGTATGACTGCTGCACCGAGAGTAAAGGAAATGCAAAGCCCCTCTTGAAGTGCAGGTCAGGAAGT # Right flank : GTCGCAGGTCAGGGCGCTGCTTGATCCGTCCGGGCTCCGCAGAAGCGCCTGTAGGTTCGTCTCACCTGACGGTCCGACCAGCACCACGGACGTCGGCTTCTTCGGCGCCCTAGTGGAGCGGCGTGACGACTCGGGGGCTGTCGATGCCGACGGGCCGGTCCGCCTTCGAGCGGGACGATCGTCCTCGCCATGAGGATCACGCGAGGTGCAGACCGGCCGGGAACACCGGCCTCGTCACCCTGCAGGAGGTGCCGGTGAGTCAGCTTCTCCTTGAGCGGCACGCAGGCGCTCCGCAGGCCACGTACTCCCTCAGCACTGCTCTTGTCGGTAAGAACCTCGATCGCAACGTGATTCTGGACGCGGGCTGGGACAGCTACGCGTGGAAGGCTACGGTCTCGGCGTGGTGGGAGCAGTAGAGCCCGAGGGTGCGGTGGGGTGAGTGCGGGTTCCACCGGTACGACGGGCCCCGCACTCACCCGGGCCGCGAGGCGGCGAGCGGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //