Array 1 106991-104711 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTJY01000045.1 Lacticaseibacillus rhamnosus strain L156.4 contig_57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 106990 36 100.0 30 .................................... TTAATGGTCTTTATTTTGGAAATCACATTC 106924 36 100.0 30 .................................... TAGCCGATGACCGGTTTACCCCGTCCCTTG 106858 36 100.0 30 .................................... GGATTAGTGACATAACTGAACCAATAGCCA 106792 36 100.0 30 .................................... CCGCCGCCCGTGCTTATGGACAGGATATGG 106726 36 100.0 30 .................................... AAAACTTATATTGAAGATATTGACGCTTCT 106660 36 100.0 30 .................................... CTAAGCCACTTGAAGGAAGGCGGGATGTAA 106594 36 100.0 30 .................................... CTGCACGTTTGGCGGCACTTGCGGGTCCTG 106528 36 100.0 30 .................................... CAATGAATGTTGTGTCACAAATGGATCAAT 106462 36 100.0 30 .................................... CACATTCAATGCTGGTACGCGTGCTTATCC 106396 36 100.0 30 .................................... TTAACTTACTTGCATTAATTCCCGTCATTG 106330 36 100.0 30 .................................... ATTATGGTGGCCACGTTGTCACGTTCATTG 106264 36 100.0 30 .................................... TCCAGTTAAATTGGGTTATTGGAAGCATGA 106198 36 100.0 30 .................................... CAGCAACGGGCTTAAGAGCTCCACCGATAA 106132 36 100.0 30 .................................... ACCAAGATGGCTACTGTTGCCGAGTTGGAA 106066 36 100.0 30 .................................... ATATCTCAATTACCGCGATGCTGAGGGTCA 106000 36 100.0 30 .................................... ACGGGGCTCTAAAAGGATTGACTAACACTG 105934 36 100.0 30 .................................... CGTTAAATACGTAATTTCAAACCCTGATCT 105868 36 100.0 30 .................................... GAACTATTGGCTGCATGTATGGCAAGTTAT 105802 36 100.0 30 .................................... ATTTACCGTTAATTTGGAATGTTGCTCTTA 105736 36 100.0 30 .................................... GAATATTTCTGCACAGCAATGGTATCGTGC 105670 36 100.0 30 .................................... CATACACCTTATTACCCTGTGCATTGTCGT 105604 36 100.0 30 .................................... TGTCATCTATTTTGAACGACAATGAAGATG 105538 36 100.0 30 .................................... TCGTATACGCGTGAAATATTCGCAATTGAG 105472 36 100.0 30 .................................... TAAATCAGCGTGGGCAAGTTGTTTACACGG 105406 36 100.0 30 .................................... CCACGGGAATAATATCAATGCCTTGATGAA 105340 36 100.0 30 .................................... CACGAAGACTACACGCACGCTGATGACTCA 105274 36 100.0 30 .................................... GATGAAGAAGAACTGACAAAGATGATCAAG 105208 36 100.0 30 .................................... AAGCCGGTTAGACGTGACATGCAAGAGCTG 105142 36 100.0 30 .................................... TGGCTTCCCATGTATTTGACACATTACCTT 105076 36 100.0 30 .................................... CATGCCGCAATCATTTGGGTGTCGTCATTG 105010 36 100.0 30 .................................... TTCCACGCCAGTGTCTGATGGTACTGTTGA 104944 36 100.0 30 .................................... TAGCTTGTTTGATAATGAATAGGATCGCGT 104878 36 100.0 30 .................................... AGCAAAATCAAAAAACAACTTGAACTTTTT 104812 36 100.0 30 .................................... GCCGTAACGGTCTGGTCAAATTCACTCACA 104746 36 91.7 0 ..........................A.....A.A. | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 99.8 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGGTTGAGCTGGCACAGCAACTGGCAATGAGCTTATTAAAAGAGCCGTTGTTAAGCGAACTTCCAGTTACAGTCGAACCCGGTGGAAAACTTGAACAAATTATAAAATACTGTAATGTTCATTTTGATGAGGAAGTAGTCACGGAGCCCTCCTCAAGAATTGAAGCAGCAATTCAGACTTTGGTAAAACTTGAAGAGAAACGGCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGAGGGTATGAGCAGGTTGTTAGATCAGGTTAAGGATACATCGTTGGAATTGCTTCTCATTGAATTTTCAGATGTCGATCGTAGAAAGTTCTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTTATGGACAGTCGAGAACTGATTGATTAAGGGACCGTGTGAAAACACCG # Right flank : CTTAACATTGCTAAACTATCCATTATTTGGGTCTCCTATAGTTGTGGAAGAGGAAAGGAAGTAATTGAAATAGAACGACAAAAATTATACAAGCGAGCAATGGACATGTTGTTAGATGGCTATGCTCCGTTAGACGCAGAGACATTAAGAGTTATGAAGGTACGCGAAGTTTATAGTCCTATTAATCGCGTAGACATGACAGCAGAGCAGTTAGGTGTTTGCTTTCCATTAAGACTAGTCAATAGAAAGCAATTGCGTGAGCTTAGAGAATTAATTCCACGTGACTTAACCCCGACAGAGATTTTTCTAAGAACAGCACGGTTGAAGGGTCAGGCAAAGCCATTGCACAACTATGCGCCTGATTCCGATGTCTGGCTTGATGGCATTATCGGTTCTTTATATTTTGGCGGTTCGGATGATGGGCATGATGATTTCTATTGACCAGACGCTGAAACTTGGTCTGGTAGTCCATCCTCTGAGATCGATATACGCCACAACTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //