Array 1 2292-59 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFUZ020000151.1 Methylacidimicrobium cyclopophantes isolate 3B, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2291 37 100.0 38 ..................................... CCATGAGTCGTCGAACCTATTGTCTGTGATGTGGACCT 2216 37 100.0 40 ..................................... TCACCCAAGATGAATCCATCTTGGGTTCAAACCCAGAGAG 2139 37 100.0 38 ..................................... CGCCTATTCTCAGCTTGCCTAACCCAGAACGTAAGAAT 2064 37 100.0 41 ..................................... TTACGTTCTTTCAGTTTGGCGTTCATCTCGTCCTTCTCCTT 1986 37 100.0 41 ..................................... CAAGCTCCCTGGCATCCAGGACTCCATTGCCCGTAACCTGG 1908 37 100.0 40 ..................................... ACCACGCGGTCGTAGCCGTCCTTCGAGAGGAGATCGCACT 1831 37 100.0 36 ..................................... CACCATCTTCCGCGAACCATTCGAGTTTCCGAATGG 1758 37 100.0 36 ..................................... CTTTAAACAAATCGTCTTTCACGCCAGAGAGGTCGA 1685 37 100.0 39 ..................................... CCTTCCCGGAGGTGAGAGTATTCTCTCACCAGCCGGTTG 1609 37 100.0 39 ..................................... AGATATACATCATACAAGGTCTCCTCGAATCTTTTGAGG 1533 37 100.0 41 ..................................... TTCTGTACATCTCCTTCCTCCTTTCGTCGGGCAGGAAGGAG 1455 37 100.0 40 ..................................... GGTACAATTCCACTTTTTCGTTCATCATTTTCCTTTCTTT 1378 37 100.0 39 ..................................... CTGCCCAGAACCCGATACATCTCCTTCCGCCTTTCGTCG 1302 37 100.0 39 ..................................... AGACTCGAGTACTTCGAGCCCAAGGTGGATTCATCTTGG 1226 37 100.0 38 ..................................... CGGGCTCGCTTCAATAAACCTCCGAAATCCCCGGCATG 1151 37 100.0 39 ..................................... GCGAACCTGCTCGACCGACTTCATGAGGGTAGCCCGAGT 1075 37 100.0 39 ..................................... CGACGAATCTCCTCGATCGCCTTCATGAGGCGACCCCGA 999 37 100.0 36 ..................................... CGACGGAAGCCCGTCGCACTCATAGACCTCCTTTGC 926 37 100.0 41 ..................................... CTTTCCCGCTATCCGGACTTTGGTAACGAAGCACCCCGAAT 848 37 100.0 36 ..................................... TCCCGATTTCCAATCGGGATTTCGACCTCATTCTCC 775 37 100.0 37 ..................................... GGCGAACACCCGGCAAAGATTCACCTTCTCTCGGCGG 701 37 100.0 40 ..................................... ACATCCATATCCCTCGAGACTTCGTTGAAGCAGCGCAACA 624 37 100.0 40 ..................................... CTTGTTCAGCGCCCGGACGACCTAACGCGCCGGACCGAGT 547 37 100.0 39 ..................................... GTGCCCGTAGCAAGACCGAATGTAGCGCGCCGCCCCTCC 471 37 100.0 38 ..................................... ACCGTAATTGATTTTCATGCTTTCCTTTCTCGGTTGAG 396 37 100.0 37 ..................................... TTCACAAGGCGATCCTGGACTTCCTTAGGGACGTCCC 322 37 100.0 41 ..................................... AATACGATCGCTGTCTTATCTCTCATCGAGACTCCTCAAGT 244 37 100.0 36 ..................................... CCTCCGCGAGAGAGCGGAGTTCGCGAATCGAGGCGG 171 37 100.0 39 ..................................... CCATGTCGTGAGATGCAACTTCTCCCGTTGATCTGACGG 95 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 30 37 100.0 39 GTCGGGAATGAAGGAGATGCCGAAAGGCAATGGAGAC # Left flank : CGGGAGAAACGAAGATGCTTACGGTAATTGCCTACGATATTGCGGATCAACGGCGGCTGGCGCGGATAGCCCGCGTTTGTGAGGATTACGGGATGCGGGTCCAATATAGCGTGTTCGAATGTTATCTGGAGCCCGACCGGGTCGATGAGCTCTGGAACAAGTTGGAAGACGAGCTCGATCTCGAAGAGGATCGGATCGTCGCCTATACCCTCGATGCGAAATGCGCAAAGAAGATCCGCACGGCGGGGACGATGGTCTGTTCGGAGCGCGTGGTCTGCTATCTGGTATGAAACGTCGGTGGATCTCTTTCGGGTCGCGAGCGCAATGCGGGATTTTTCTACCAGCTCCCGACCTGATTCGTATTCTATTCCGAATCAGCGTACTACAGCTTCTTTCAGCTTGTGCGATCCATGCACTTGGAGGAAAATCGCTAATCCTCTTCACAGTCCCGACCTGCGATGGATTTTTGGGCTTAAGCCTCAACGAGTTCCAAACCTGCG # Right flank : CCCGCGAGGCTGTCTATTGCTTTACACAACTCATCCATATGTCGGGAATGAAGGAGATG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGAATGAAGGAGATGCCGAAAGGCAATGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 58-473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFUZ020000242.1 Methylacidimicrobium cyclopophantes isolate 3B, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 58 37 100.0 38 ..................................... TTTTTTACCTAACCGGCAAAGCCAGCCGGATTAATTCT 133 37 100.0 38 ..................................... GAGACCGTCGAATTCGTAGATCGCCTGAGCGAGGCGAT 208 37 100.0 39 ..................................... CATTGAGCGCCCGCGTTAACTCTTCCGCGGGCCGCTCAG 284 37 100.0 41 ..................................... TCTGTCGGGCCAAAGCGAAGTCCTGCAGCTCAGACGCTGCG 362 37 100.0 38 ..................................... ACGCATCAACATCTGCAACTCACGAGCCATCTTATCGA 437 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 6 37 100.0 39 GTCGGGAATGAAGGAGATGCCGAAAGGCAATGGAGAC # Left flank : GCCGAAAGGCAATGGAGACAGTGGAATTTCTCCCGTTTGTCTCGCGGGAGGTCAAGCG # Right flank : GGGAGACCGTCGCACTCGTACACCGCCTCGGCGAGGCGGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGAATGAAGGAGATGCCGAAAGGCAATGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 58-397 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFUZ020000243.1 Methylacidimicrobium cyclopophantes isolate 3B, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 58 37 100.0 40 ..................................... AGACGGCCTCCGCGAGGCCGTCAATTGCCTCAAACAAACT 135 37 100.0 37 ..................................... TCCTTTCGCTGTTGAGTCTTCAACTTGTCCCGGATGT 209 37 100.0 38 ..................................... TCATGCGACTTCTCGTCTATCTCCTGAACCCATGATGG 284 37 100.0 40 ..................................... CCGGCTCGATCTTCTTCAGACTACCTGGTGGAAACGACGT 361 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 100.0 39 GTCGGGAATGAAGGAGATGCCGAAAGGCAATGGAGAC # Left flank : GAAAGGCAATGGAGACCCATGGAGGAGATCCCGCTCCTTCCAGTCTAGGTCCTCCCGG # Right flank : CTGCTATCTCAGACGCAGGAGATTCGCTTTCCATTTCTTCCGTGGTGTAGGCGAACATTGCGCACTCGGGATCAATGAGCCGGATCCCTTCCGCGATTGCCCTCCAGGAGAGCATTTGACGGGGGTAGCGCTTCCACGTGTCTCCCTTCTTTTCGAATAGCCCGGCGGCTCGAGCCATTTCTAAGGTCCAGGTGACGGCGATTTGTTCGTTGCCTTTCTTCACGATCACCGAACATTCCTTGTCCGTTCTAGTCTTGAATTCGACTTCGCCTCCGCGCTTCTTGAAGCGAGCGAGCAATGCCGCCGATTTGATCGTGACACGTCCGTCCGGGCTTACATCCCACTCCGCCAGGGTCTGCATCGCTCCCTTTCCGCTTTCCCGCGACATGCATAGCAAGGTGAAAGCCTGTTCGATGGTCTTGAAGCCGAAGATGCCGGACGCGACCGCCGCTTTTGCGTATTTCCAACGCACCATGAATTCGTCGTCTTCTTTCTGAATC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGAATGAAGGAGATGCCGAAAGGCAATGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA //