Array 1 92335-91287 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSNM01000003.1 Pseudomonas aeruginosa strain PA-W21 IPC1287_3.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 92334 28 100.0 32 ............................ AACGGACCGATGCCATCGTCGGCACGCTCGTA 92274 28 100.0 32 ............................ TTAAGCCACGCGTCCAGATGGCGCAGGCAAGG 92214 28 100.0 32 ............................ TTTGCCCAGGCGTGCGCGGGATGAACTGGAAC 92154 28 100.0 32 ............................ TGGGGCGGTTTGGTGTTCTTGCGACTCTCTTC 92094 28 100.0 32 ............................ TTCGAACTGCCAGATTTGCTCGCGTGCGTTCT 92034 28 100.0 32 ............................ TTGACCACGGGCGAGACTTACGCCGAAATCAG 91974 28 100.0 32 ............................ TCATGGGCTGGGCGGCGAACGTCCTCGCGCAT 91914 28 100.0 32 ............................ TCTACGTCCGCCAATTCTCTTGGCCCGTTCGC 91854 28 100.0 32 ............................ TGGGTGGCCGACATCGTTGCGTCGAACTCGTA 91794 28 100.0 32 ............................ GCATGCTGTCCGGCCTGTTGATCGGCCCGCTG 91734 28 100.0 32 ............................ GCAACGCCGGCCGAAGACCAGACCATCACCGA 91674 28 100.0 32 ............................ TTCACCGTCACCCAGTCCTGGGTGGCGTAGAC 91614 28 100.0 32 ............................ TTGGCAGCTGTAGCCAGAGCCGGATGCGAAGC 91554 28 100.0 32 ............................ AGAGCGCTCTGGTGGACGGCTGGGTACGACGA 91494 28 100.0 32 ............................ CGTATCAGCGGGCCGCCAATGAAACCGTCGAG 91434 28 100.0 32 ............................ AAGAAGATGAACCGCGACGACCACCGATAGGA 91374 28 100.0 32 ............................ AACGCCCAGCGCCAGCGGGAGAAACGCCAGCG 91314 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCTTCTAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCAGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //