Array 1 106189-105801 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIJ010000002.1 Acinetobacter baumannii strain A522 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 106188 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 106128 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106068 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106008 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 105948 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 105888 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 105828 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111277-114246 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIJ010000002.1 Acinetobacter baumannii strain A522 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111277 28 100.0 32 ............................ CACCAGTCCGGACGGCAACGGCATAGGACGCC 111337 28 100.0 32 ............................ TTTAAACATTAGTAGTTGTTGATTATCCATCT 111397 28 100.0 32 ............................ TTGTTGGCGGCGACGCATCGAAAATCGGCTTT 111457 28 100.0 32 ............................ TATCGAAGAACGCATTTTATCGCGTCTGGACT 111517 28 100.0 32 ............................ AAGCGGCATACGATGGCGGCATGCACTGGCAC 111577 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 111637 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 111697 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 111757 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 111817 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 111877 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 111937 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 111997 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 112057 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 112117 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 112177 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 112237 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 112297 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 112357 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 112417 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 112477 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 112537 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 112597 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 112657 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 112717 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 112777 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 112838 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 112898 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 112958 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 113018 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 113078 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 113138 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 113198 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 113258 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 113318 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 113378 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 113439 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 113499 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 113559 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 113619 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 113679 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 113739 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 113799 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 113859 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 113919 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 113979 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 114039 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 114099 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 114159 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 114219 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGTCTAGACTCGAATGAGGTCGTTTCAAATTATAAAACTCAAAATATGCACTTAATTGCTTTTTCGCATCTGTGACACTGCTATAAGCTTTGAGATACACCTCTTCATATTTAACGCTCCGCCATAATCGTTCAACCATCACATTATCTACCCATCGACCTTTACCATCCATACTGATTTGAATGCCATTTGATTTCAATACATCAATAAATGCATCACTGGTAAACTGGCTGCCTTGGTCTGTATTAAATATTTCAGGTCGACCATATTTTTCAATAGCTTCATTTAATGTTTCTATGCAAAATGTAACCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //