Array 1 67169-70304 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010902.1 Moraxella catarrhalis strain MC8 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 67169 28 100.0 33 ............................ ATAATTCAGCCAGGTACTCGCAGATTCGATTGT 67230 28 100.0 31 ............................ GACCAGAATATTTTGGCTACTTTTAGAGCAG 67289 28 100.0 30 ............................ AATTGAGATTTGTTAAAAGTTGATTGGTGT 67347 28 100.0 30 ............................ TTTCACAATCATCGTATTGGCTCAGTGCAT 67405 28 100.0 31 ............................ CACCACAATGTTTACACGGTCCGGATTAGCA 67464 28 100.0 32 ............................ ATTTTGATTTTTGATGCTTGAGCGAATCTTTG 67524 28 100.0 32 ............................ AAACAATTCGATCAGATTAGTAAGCCATTATT 67584 28 100.0 33 ............................ ATAGTTACAGCAACAAAGCAACCGCCGATAGAT 67645 28 100.0 31 ............................ ATCATAGTTAACAACTTGTTGTACAGCTTAA 67704 28 100.0 33 ............................ TTTGGCACTTGCCGCCGCTTGCTCTGGATTTTC 67765 28 100.0 32 ............................ GCACACACTTGACAGCCAACACTCGATCAATC 67825 28 100.0 30 ............................ TATAACCGCATAGCTTTAGCTGATTGGTAG 67883 28 100.0 32 ............................ ACGTGTGAAAAAGCGTGTCACTGCATCATAAA 67943 28 100.0 32 ............................ AACTTTTTAAAATACTGCTTGATGGATTCATC 68003 28 100.0 32 ............................ TACTTTAAATAATTGATTGTTCATAGTTTTAT 68063 28 100.0 31 ............................ TCACGAAATACACGATTATCATGTTCGCTTA 68122 28 100.0 30 ............................ AATATCCGAAATCTTTGGCAAAAGTTGTAG 68180 28 100.0 31 ............................ TCCATGTACAAAAGCGTGTTAATAACATAAT 68239 28 100.0 31 ............................ TTAACTGTGATAGCACTTGGAATTTAACTTC 68298 28 100.0 33 ............................ AAAATGCTTATTACAAAGCGCACACAAAGCATT 68359 28 100.0 33 ............................ ATTGAAATTGCTGGTAAACTGATGTAACAGCAG 68420 28 100.0 31 ............................ TTTGCCGTCGCTCTTAGAATTTGGATTTTAT 68479 28 100.0 33 ............................ AATTATATTACAGTTGTGGATAGTCGAGTAATC 68540 28 100.0 29 ............................ AGAGCTGACGCATTGAATTTTTAGCACAT 68597 28 100.0 32 ............................ TTTATTGTTCGCAATGTTACTTATCTTACAAT 68657 28 100.0 33 ............................ GCCCAAGGGGTTTTTAGCACATACACGCCGTCA 68718 28 100.0 32 ............................ TTCGCCTGCGTTTTGACTTGCCTGTATTTTTG 68778 28 100.0 32 ............................ GCTCGGATAAGCTTTGGTTTGTCGTTGTTAGC 68838 28 100.0 33 ............................ AATGCTTGATACAAAGTATTGTACAGCGTCAGT 68899 28 100.0 32 ............................ TCTTGACCACAGTTTACGCACGCCGATTGGCA 68959 28 100.0 34 ............................ AAATTCCTCAGTTTGCTGCACGCCTAGATTTATA 69021 28 100.0 31 ............................ AATCACTTTGATAAGCTTATGAACCACTATC 69080 28 100.0 32 ............................ AATCAAATATCTGATGATGAGATAGACCCCAC 69140 28 100.0 31 ............................ TACTCAAATACATTGTTATTTCCGTTATTAA 69199 28 100.0 33 ............................ ACTTACTGAGTCTTTCAACTGCTATTATCGACT 69260 28 100.0 33 ............................ CTATTTACCCACCTTTCGTTAGAAGCCTATTTG 69321 28 100.0 32 ............................ TCTAGGGTTTATGCAAGACATTTGGCGACATG 69381 28 100.0 30 ............................ ATCGTTTGGTCTTAGCAGTAAGCTATATTA 69439 28 100.0 32 ............................ ATGTTCTCAGTGATAACACGCCCAACATCGAT 69499 28 100.0 33 ............................ AATACTCAATATCATGTACAGTTTTCATTAAAT 69560 28 100.0 31 ............................ TAGGCAATGAGCCTGAAGTCAAAGCATTACT 69619 28 100.0 34 ............................ CATAGTGAACAAATGAATATTAATCAGCTTTGTT 69681 28 100.0 31 ............................ TTAATTCAATCGATTCTTGTCCAATTACATT 69740 28 100.0 32 ............................ ACTGTAGATTATCAGCAAGACTGGGTAATGTT 69800 28 100.0 32 ............................ AATTATACTTGAGCAATACGAGAATAAGAAGC 69860 28 100.0 30 ............................ TAATAGATCCTCGGTGATCTCTTAATTAAT 69918 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 69978 28 100.0 32 ............................ GCCTTGGTGTTGTCAGTTTTTGAGCAGAACGA 70038 28 100.0 31 ............................ AAAAACCGTTGTGGATAAAATCGCTCCTCTA 70097 28 100.0 32 ............................ GAAAACATGGGCTTTTTATCGCCGTGCGGACT 70157 28 100.0 32 ............................ ATAATTAACAGTTGCACAACCAATCTTAAAGA 70217 28 100.0 32 ............................ ATTGACTGAATTTACCGCAGTTTCAATCGTTG 70277 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 53 28 100.0 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTCAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATTACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGTGCCAATGCCGAAAGCTATAATGCCCAACGCCGTATGGAACAAGAAACCGATAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTGAAGGTATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //