Array 1 174615-173156 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000006.1 Nostoc sp. XA010 NODE_6_length_321515_cov_80.286993, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 174614 37 100.0 34 ..................................... ATCAAGCAGACACCCTCCTATGTGACAAAAACTG 174543 37 100.0 33 ..................................... CTTTGGTTTCCTCCCCTGCAAAAAGCTGAGTTT 174473 37 100.0 35 ..................................... TAGATTTTAAGCGTGAGTTTAAAGGGTGGAAACGA 174401 37 100.0 33 ..................................... TATTTTGTATTTGGGAAGAGATGGACTTATGGC 174331 37 100.0 32 ..................................... CGTAACGAGCAGGGTGATAAAGCCTTAATCGG 174262 37 100.0 33 ..................................... AAAGCATATTTGTATGAACTACAAGAAAGAATT 174192 37 100.0 36 ..................................... ATTGAAAAGTTGCATTAGGGCTAGATATCCACTAGA 174119 37 100.0 35 ..................................... AATATTTCTAGTTTGGCATCTGTAAATAACTGCAA 174047 37 100.0 36 ..................................... AGGTAAACTAGCTGTGTGGTTGGTTGCTCACCTCCC 173974 37 100.0 35 ..................................... AAATAAGGTACTGTAAGCCGATCTCACGATACGAG 173902 37 100.0 33 ..................................... AGTCTCACAGATTAACTCTAATAAAAATGCACC 173832 37 100.0 31 ..................................... GAAAAACTAGCGATCGCCACCACCAAAACTC 173764 37 100.0 35 ..................................... TAAATGTTATTAATTTATTGCATTTCGATGGAATA 173692 37 100.0 35 ..................................... CTTTGTCCATATTCCAGCTCTATTTTTAGATAAAA 173620 37 100.0 32 ..................................... TAGAAATCTGGGCTGACGGTAGCGAGTATTGC 173551 37 100.0 32 ..................................... GGAAAAATGGCAGAGGGAAATCTCAGGAAAAC 173482 37 100.0 35 ..................................... TCTATTTGCGGAAGCGTTGGGATGCTGGGGCGAAT 173410 37 100.0 36 ..................................... AATTTTAAAGCAATAATAGCTGTTAGCAGCACTAGC 173337 37 100.0 36 ..................................... ATATACAGCTTTAAGATAGGAGAACAATACCCGTAT 173264 37 100.0 35 ..................................... GCGACTTGCTAAGAAGGCGATTGGACACGCTAAAA 173192 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ==================================== ================== 21 37 99.9 34 ATTGCAATTCAATAAAATCCCTATTAGGGATTGAAAC # Left flank : TCCCAATATGCCAGGAGCAGTACCTTGGACAGCAACCCAAGCATTGAATAACAGTACTTTACCTTATGTTGTCCAGTTGGCGAATTTAGGAATTAAGGCACTGGAAGTTAACCCAGCATTAGCTAAGGGTGTGAATGTGCAGAACCATCGCTTAGTACATCCTGCTGTGCAAGAGGTATTCCCTGATTTAGTAAATTAAGGTGTGCAAGGATTAGGCGATCGCTTATTTTGATAGAGGTAGCGATCGGTAATTAGACTAATTTTCTTGCTAAATGCGCGGATGGGTAGGTGTACAAAATGAGCAGGAGCAAAAAAAGGCTGTATGCTCCTTCTATACAAGACTTTGAGGGCGATAGTACTTTCAAACCATCCGCGCACCTTATGGGGACTGTTTTTCAGCGATTTACATCTTGTGGTATGACTATTCCCTGTGTTATGATTTCTTCATTCGCGCAATCGTACCTTGAAAACCAAATACAGCAGTGCTTTCAGACGCCAGC # Right flank : TGACGCGCTCCTCGAAGCATGTTTTTTCTACTAGTTGCTCATCTACCCACTCCATTCCTTAAATCTATTTTTTAAAGCATAACTAAACTACCATCCACTTCTTCTTCAAGTTCACAACCATTAGCTAATTTTTCAATTGCTTGATCAATCATTGCTAAACCTTGATCTACTTTTTCAACCAAACTTAGCTGTCCTCGAAGTTCGGCAGCACCAACGAAACCTTTAGCATACCAAGTCATGTGCTTACGGGCTTGACGTACACCGCGATCGCCTTTATATTCCCACAAGGCTTGTAAATGATCTCTTGCACATTCCAAGCGCTGAATCGGGGTTGGTGATGCTAACATCTCTCCAGTTTTTAAGAAGTGATCAATTTCTCCCACCAAAAACGGATAACCCAAAGTCCCACGGGAACACATCACACCATCAGCGCCAGTTTGCTCTAAACATTTCACCGCCGCTTCAACGGAAAAAATATCTCCATTCCCAATCACTGGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 172664-173342 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000012.1 Nostoc sp. XA010 NODE_12_length_227200_cov_77.229693, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 172664 36 100.0 35 .................................... CAGAGGCGGCACGGCTGGCAACTACTGCAAAGAGA 172735 36 100.0 35 .................................... ATGCTGCTACCTCATCTGCATCTAAATCTGCTTCA 172806 36 100.0 36 .................................... TATCATGTTCTGATGATTAGCCTGGTGAAAGTATGC 172878 36 100.0 35 .................................... GCATGGCTAAAAGAGATTATTGGAAATCGGAAAGA 172949 36 100.0 35 .................................... TTAAATCATGGCTTGCAGCGTCCATCAAATCTTTA 173020 36 100.0 38 .................................... AAAAGCTTACGAGATAAGCACTGGCGCGTGCTGCACCT 173094 36 100.0 36 .................................... GAGGACGTATCCCAACTTCCTTGTTATTCTTAGATA 173166 36 100.0 33 .................................... ATGTAGATTTCCTTAAGGGTGAAATAATAATCA 173235 36 100.0 36 .................................... ATCTAGACGATAACGGGGCATTGGCTAATCTTAAAA 173307 36 94.4 0 ...............................A...G | ========== ====== ====== ====== ==================================== ====================================== ================== 10 36 99.4 36 TTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : TCGTTTTATGTTTTCTCTGCTGTTCATAGAATTAACAGACCTCATACGCAATTCTTCGCTGGAAAGGGGGACAAAAGAGGTTTTGATTAAAACAGCTTTTAGGGAGTTTGCTTGTGCAATAACAGACTTTGAAGACGTTGGCAAATAAGGTTGGTTATGAGAGTGCTGGTATTGCGTAAGTGTAGCCTAACCCAGGCATCACCCTGAAGTCAGTTAACCTATAGGATATTTATAAGTAAGCAGCTTTCCCATCAGATTAGTTTTTTCGCTGAATGCGCGGATGGGTAGGTGTTCGGGAAGGAGTGATGCAAAAAATGGCTGAATTGTCCTATATGCAAGAACTTGAGAGCGTAAGCATTTCTAAACCATCCGCGCACCTTATGGGGACTAGTTTTCAGCCATTTGCCTCTAGCCAAATTACAACTCCTCGTGTTATGATTTTTGCATTCGCGCAACCGAACCTTGAAAATCAAATAGAGCAAGATTTTCAGAAGCCAGCA # Right flank : GGCGATCGCATCCTATCAACAAAAAAAAGTCCCCACACTTAAGGCAGGGACTACAGGCTGATTCTAAGTACTTATTAATACAAGATCAACTAAGATACTTTCGGTTGTTGCCATAGGATGAGTTTCAATTCAGAGCAGTAGCAACCCCCACCACTAATTTCTCCTTCGTAGTCAGCTAGCCAATCATAAATTAGTGTAGCTTTTGCTAATGCCACTTTTTCTGATCGATAAAGCCGAGGAGTAGGGCAGTAGGCTTGGCCATTGATGTGTATAGCTGCAATTTGCCAATAATCGCTCTCTGGTACAATTTCTAAAAACCCGTTACTGTAAGGCTGGATTATTCCTATGTTCATCTACAACCATCAAACTTTAAAATGAAGACCATAACAAAGTCGATACCAGCCAATTCTTCAGAGTCAAAGCTGGAATCACCAGGGAATGCAGTAGCAACCCCTGCTAATGATTGTGGGTTCGTAGTCAATGAAAATCTGAATGATTAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 76206-78988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000023.1 Nostoc sp. XA010 NODE_23_length_100580_cov_103.226822, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 76206 37 100.0 36 ..................................... CTTGAAATACCGAGGGCAGCAGCTAAACCTGCTAAC 76279 37 100.0 36 ..................................... ATTTTTTAGTGCCTGTTTCACAAAGAGCGCTTACAA 76352 37 100.0 37 ..................................... ATTTCAATAATATTGTGGATGTTAAAGGGCATCCAAT 76426 37 100.0 36 ..................................... TTAGATCACCCAGGCTTACACCAAAGCAAACTTTGG 76499 37 100.0 37 ..................................... AAATACTGGGAACAATTCCACAAATAACTCAAAAACT 76573 37 100.0 41 ..................................... TAAAAAATCTCTAGTAATAAACTTCGGTGCTTTTCATAAAG 76651 37 100.0 41 ..................................... TTGTAGCGGTTTATCAACATTATCTAATGGATATATTGCAG 76729 37 100.0 38 ..................................... CAAAATCGGTTGGTGCTTACCTTTCTAAATATGTTGGG 76804 37 100.0 38 ..................................... TTGGGAGTACATAGTTACTACTCAATTTTTAGTTCAAG 76879 37 100.0 36 ..................................... TTGAGACTTGGAAAGTATTGGTTAGTGCATGTAATT 76952 37 100.0 35 ..................................... TTCCAGAGTTATCTGCAACCAGAAGAATTAGCCAA 77024 37 100.0 41 ..................................... ATATCAAGCACTTTGATGGTGGGGACGAATCCGAGGGTCAG 77102 37 100.0 35 ..................................... TTTCTTGAGGCGTTTTTGGGGTTGGGGCAGCTTGT 77174 37 100.0 36 ..................................... ATATCAGAAGAAGAATTATTAATGAAAGCTGCATAT 77247 37 100.0 41 ..................................... AAACCCGGAAGTAATAGCCCATATCCTACAAACAAACTACG 77325 37 100.0 37 ..................................... ATAACATAGTTATTGATATTTAAATTGTTGAAGCCCG 77399 37 100.0 44 ..................................... CTTTGCAATTCCCCCAGAAGGATTACCTTCTAGGGGAATGCTTT 77480 37 97.3 36 ............................A........ CTTGATATTACGCAAAGGGGGAAAGAAGCCAGCCGT 77553 37 100.0 38 ..................................... GCCAAGACCACCGCCAGAACCAAAAGGTTGAGCAGCAT 77628 37 100.0 38 ..................................... CGATTTACGGGCAAGGTCAGACAGGGGATACCAATGGG 77703 37 100.0 36 ..................................... ACCAACTTAGAGGAAGAGTTTAAAAAAGAGCTAAAA 77776 37 100.0 36 ..................................... ATTATTTTTAATATTAAAATGAACTGTGTAGATGAA 77849 37 100.0 38 ..................................... TTCTAAGGATTCGTTTAGCTCTTGGCGCACTTCCGGCG 77924 37 100.0 40 ..................................... ATATTTATTGATGCTGAGAGAACTGAGTTTGAGGCTGAGG 78001 37 100.0 35 ..................................... GCTGAGTGTGCTGCTTTTGCTTCTGATTTAGGTAT 78073 37 100.0 38 ..................................... TCTAGAATGAGCGCATCTCAACAAAAGACCGGAGTCGG 78148 37 100.0 36 ..................................... CTTCTAAACAATTTATTAAAATACATGGTAACTCAG 78221 37 100.0 39 ..................................... CTTGATTGTATGCAATAACTGTTAATTCCATGCCGCCGA 78297 37 100.0 34 ..................................... TCTAGAAGCCAGACCAAAGGTGGCTGTCACTTGT 78368 37 100.0 34 ..................................... ATCAAAATGCATCTAGTTTTACCATTCCTACGAC 78439 37 100.0 37 ..................................... AAAACTGTCAATATTGGTGCAGGGTGGTACGGGCTAA 78513 37 100.0 35 ..................................... TCTTTTGGTTTTCATGCGATCGCCCCTGTGGTAAA 78585 37 100.0 36 ..................................... CATAATTTTTATTTTGTATGAATGCAGACTACAGCT 78658 37 100.0 42 ..................................... TTCAGAAAATACTAAATATTGATAGGGTTTTGAATCTTCGGA 78737 37 100.0 34 ..................................... CATTCTTCAAGACATCATACTGGGTCAATATTTG 78808 37 100.0 35 ..................................... ATTAAGCTTTTCCTCTCGTAATTCTGAATCTAACT 78880 37 100.0 35 ..................................... ATCGTGGTTGCTTCGTTGCTGGATGAACCTTGTTT 78952 37 91.9 0 ............C............A......A.... | ========== ====== ====== ====== ===================================== ============================================ ================== 38 37 99.7 37 GTTTCCACTAACTAAATCCCCTCACGGGGACTGAAAC # Left flank : GATGGGGAGTACACCGTGAGAATTGACCACTTGAAGCCACTCAACTACCTGGATTCAGAATGTCAGCAGATGCAGCACATTAGCGATCGCATTTCACGGCTGCGGGAGAGCAAGAACTTGGAAGAAGCGGCTCGTGCTGTGCTGAAGCACTTGGGGGAACTGAAGCGGCCGTATTTGACGGAGGTGGAGGAGAAGCTGTTGGGTTTGATTGAGCGAGAATATGGGCTTAGAGATTAAATCTCCACAAACTCGTAGACAATAATAGATACACATCTTATGATTATGGAATCAGTTTGATATTTGGCAAGTCGAAGCGGGGTCAAAAACGCTGGGGATCTGCCAAAATCGCCAGAACCTTGACAAGTAAATAGTTTCACAGTTTCAGTGCTAAGGGAAGTTAAGAATTAGTCGCAATAAGAGCGGCTGAAATCGACCTATTTTTGAGGTTCGCCAAAATGCTTCCCAGGAAGCCTGCTCTGTAACAGTTTCAGCACGGAGCG # Right flank : CAACTAGGGAATATAGCAGAAAGTGATCGGGCTAGGTTTCCAAAGCCTATCACCCCGTAGGGGGATTAAAAATCTAAAGATTAAGCAGGGTTTTCCTGGCACAATTGATTAACAACTCTTTCGATTTCTTGTGCCATCCAATCAGATCCGGTCTGTTGGTAAACCTGAACTAATGATTGGTAAAACCACAAAGTTTTTTCTCGACCAGCACTAAAATTAGTCCAGACGACATCTCCACATTGTTGCCAATCAGCTAAAAGCGATCTGGAATTATGCAGTTTGTCAGCCAGAGAAACCAAGCGTACAGAAGGTGAAGCAGAACGGAGATTATTGAGGTAACGCTGCTTACGTTCTTGCCAGGGAGGTTTAGGAGGTGTGTCCCACTCAGTACAGCCATCGATAATAGCTAAAACTGTTTCACCAAAGAGTCGATGGATATCTTCACGAATGGGTTTGCCGCCTTGGTCTTCGACTGCATCATGCAAAAGAGCAGCGATTGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACTAACTAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 79351-79893 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000028.1 Nostoc sp. XA010 NODE_28_length_80638_cov_75.554533, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 79351 37 100.0 35 ..................................... TGCACTAGGAGGAGCGGATTCGATTACTTCCTTAA 79423 37 100.0 37 ..................................... TTAGATAAACTGTGGAAACCAGAATCAGAGCCACAGC 79497 37 100.0 35 ..................................... TTTGAGACATATTAACCGTGAGAAATTACAAAATC 79569 37 100.0 34 ..................................... CCTTCTATTGATGATGAATGGGATAAAGACGACC 79640 37 100.0 38 ..................................... TTTTCGCTTTGCCCCCCCAAGGGAAGCGGTATGCAAGA 79715 37 100.0 34 ..................................... ATATCCAAGCTTGATGCAATAAACCGAACCGTCA 79786 37 100.0 34 ..................................... GTGCAAACTTTTATCGCTATGCACCAAGAGGAAT 79857 37 89.2 0 ................................ATC.T | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 98.7 35 GTCGCAACAACCCTCCAGCTAGTGGGTGGGTTGAAAG # Left flank : ACAAAGCAAAGGAATTAGCACTTTCTGCTTACCATCTCCGCCCAAATAGGCGAAGTTGACAAACTGAACCTTGACAAGAGAATATTTAATAGCGCCGAAGTTTATACTGCTTGCAGTATAAACTTTGTTAAATAGGGGTTAGTTTGACTGTAGCAATGCAGTCTTGCTTTCTGGCCCTGGTAGCTGCTCACCCTGAAGCTGCTGTCTTTGGACAGGATAGGTGCGCTCCCAGCAATAAGGGCGCGGATGTACTGCTGTAGTGGCTACCAAATCACCCCCGATCAAGGGGGAACCCTCCCCAATTCTTCATTTGAAGGACTCAAATCAAGGCAAAATTTCTTAGAGATCCGCGCAAATTGTAAATAGCTTGTCCCATCTGAATTTCATCGTTTTTTCACTAAGATATGATTCTTGAGACTAAAGCTCTGATAGCAAATTGGGAGAAATTTGCGCTAAGGACATCTAGAAACATTGCCCCACAATATTTTAAAGCTGAGTCG # Right flank : TCATTTTTATTAGGGAGGGTTGAAAGAGAGCGCTACGTTGACATTATCGTTATATAGTCTCTGTAATTGACACTCCCCGCTCTAAAGAGACGGGGATTCTTGGTTCCCTGACTCGCCGTTAGACAGCAGGCTTGCGCCAACTGCCCAAGAGGGCAAATCTCCCCAAGGGTAGGGTCGAGGTGTGCATTACTGCATCACCCCTCCCATTCGGAACCGTGCTTGCGACTTTCACCGCACACGGCTACTCAGTGTGTTGTCCATTTGTCATATCGGACTTCCTGACAGCATGACCTATGAAATTAGGAATATCATATATCCACTCCCAGTCATATTTATTCCAAAATTGAGAAAGTTTCTCTCGGAATTTTGAGTGGTCTTTCTTCCTAATTTCCTTTAAGTCAAGTGCGGTCTTTTCGTCGTGACAGTGCCGATGTAATAATTGCAGATTTTTATACTCATCCTTGCCTCTTAATGCTCTGGGGATTTTGTGATCTACTTCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAACAACCCTCCAGCTAGTGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 521176-522076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000002.1 Nostoc sp. XA010 NODE_2_length_577161_cov_75.876075, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 521176 37 100.0 36 ..................................... TGAAATGACAGCAGGTAAAGTGGGTAAGATTGGCAA 521249 37 100.0 33 ..................................... AGTATATCTCTCACGAAAATACAGCTTCACCTG 521319 37 100.0 34 ..................................... ATGATGGCAAGAGTTCCTGCGATACTTTGTGGAA 521390 37 100.0 35 ..................................... TAGATAATTCTGCCATCTAATTCTATCGACCAATG 521462 37 100.0 35 ..................................... ACGAATTTCAGCAACAAAGCAATTGATGGAAACCA 521534 37 100.0 34 ..................................... AATAAAGGTAGCGGTGGTAAAAATACATTAATTC 521605 37 100.0 37 ..................................... AACTTGCTCTATGAATTGAAAGGCACAAACCATATGA 521679 37 100.0 34 ..................................... TGATGATTTGCGTTGCTACTTCCCCTAGTTCCAG 521750 37 100.0 35 ..................................... GCCGATTTTACCGACGTTGCCGCCTACAATCTCGA 521822 37 100.0 35 ..................................... GTATAACGTGTAAAGAGTCTACACGAGTGGCAACA 521894 37 100.0 36 ..................................... ACTATTCTATGTGCCTCCGGCAGTCGCAAATCTCAA 521967 37 100.0 36 ..................................... ACGAGCAACTAGACGGGATTTTGCAAGCATGGAAAG 522040 37 86.5 0 ................................TGTTT | ========== ====== ====== ====== ===================================== ===================================== ================== 13 37 99.0 35 ATTGCAATTAATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCTGTTCTCAAGTCTTACGGACAATGGATGCAACTGAGTGTGTTTGAGTGCGATATCACTTCCACTCAGTATGCTAAACTGCGATCGCGTTTATCTAAATTGATTAAACCCGACACCGATAGTGTGCGCTTTTATTTTCTCTGTGGCTGTTGTCAGAGAAAAGTCGAGCGTATTGGTGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCTTCTTCTGACTAGGTTCCTGCATCTCAAATGCGCGGAAGGGTAGGTGTACAAATTCCACAGCCCCAAAAAAATGCTTCTATCCCAACTCCAGTAAGGCTTTCAACCTATTAGTCGCCTAATCCTCATCCGCGCAACCTCTGAAATGCTTACCAAAATGCGATTTCAGCCTTTAAATTTTCCTGGCGCTCTTTCCAAACGAATTGTCTAATGCTATGATTGCCCTTGAATCGCGCAACCGCACCTTGAAAACTAAATATAGCTTGGGTTTCAGGCTCCCGCT # Right flank : TTGCTCGATACCCAATACCCCATTCAAAATTCCACAATTATCGGCGTATGGTCGCTAGGTTGCGTTAATTTCCTGGGCGCGACATCGATAATGCAACTTGTAGCACGCTCATACAGAATAGGTGTGAGATAGTGATGGTCAATCCGCCAACCTAAGTTGCGACGGAAGGCGGCGGCGCGATAATCCCACCAGCTATAATTTCCACCTTCTGTGGTGAACTTGCGAAAAGCATCAGCAAATCCTAATTCCAGAATATCCCGTAAGGCTTGGCGCTCTGATTCTGTTGCCATAATGTGATTTTCTGTACTCACTTGCTCATGAATATCCTTATCTTCTAGGGCGATGTTGAAGTCACCGCACACACAAATTGCAGATTGTGACAGCACCAACAATCGTAAATACTCGCGTAGCGCTGTCAACCAGCGTAATTTGTATTCATATTTTTCAGTTCCGACTGCTGCACCATTGGGAACATATAAGTTAACAATCCGAATACCATC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 4924-4426 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000003.1 Nostoc sp. XA010 NODE_3_length_449485_cov_77.274923, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================================================================================================================= ================== 4923 36 100.0 37 .................................... TTTTACAAAAGCTTCCAAGCATTGAAAAAAGCTTGGG 4850 36 100.0 35 .................................... TTGACCAAGTTATTAGGGTATCTTGTTTAGCAAAG 4779 36 100.0 37 .................................... AGCCTTGGAATTTGCTGGGGCAGTTTGTTTGCTTGAA 4706 36 94.4 209 ...............T...............T.... TATTTGCGTCTGTTCCAATTAGTACTAGCTATTGATGCTCAAGAACCATCTCGTCTAAAAGTTGCCTAAGAGGGTTGAAAGGAATGTCATCTTCCCAATACTAAGGTGATTTACAAGAAAGAATTTACCGATTAGAAGAGCCAACAGCCGTTCTCCTCTACGATGGAATGATGTTGAGTGGTAATTTTTATTCTGGAAATCATCTAAAG 4461 36 69.4 0 .G....A.T....AGT.....AT..AA........T | ========== ====== ====== ====== ==================================== ================================================================================================================================================================================================================= ================== 5 36 92.8 80 TTTCAACAACCATCCCGGCTAGGGGTGGGTTGAAAG # Left flank : CCGCTTAAATTTAATTTACTAATCCGAACCTAGAAAATATAATATTTTTATAACAGCGCCGCAGTTCATGCTCCTTTGAGCCAATGTACTGTGAAAAATCTGGGTTAGTTTGGCGGTTGGAGGATCGTCATGCTTTCTGACCCTGGTAGCTGCCCGCTTCTGATGCTGCTGTCGCAAGACAGGATAGGTGCGCTCCCAGCAATAAGAAGTAAGGCTTTTAGCCATAGTCGTTATTCATAACGGTGTGGATTACCACAGTGGTGGCTACTGAATCACCCCCTTCGTCGGGGGAACCCTCCAAATATTTTTTTGGCGTGTCAAAGCGGGGGCAAAATCCCTGGAGTCCCGCCAAAACTTTGAAACCCTTATCCAGTCTTGCCTTAAGAAACTAGTATGTCAATGCATTTAGTTTTTTAATTTGCAATTCGAGACTTTTTAAGCAGACCTGCCAAATTATGTGTATGGAAAGCTTTTATAGCAAGGGTTCTAGACGGGTAGAG # Right flank : AAATGAGTATTTTCTTGTAAAGACAATATGCTACCGGTTACTTTCACTGATTAGTTGCTTCATCATAATTATGTTTAATGGGTAAGGGTAGTGCTGAGAGCGGAGTAAGAAAATTACCCATTGAAACTTGGTTTAGCAGAATATTGGTGAGTCAGTTTAATATAGAAGCTAGTGTGCCAATTAGACCACAATCTAATACGACATTAATTTGCGAAAAACTAGCATAATTAAATTGACTCTAAAAAATAGCCCGAACGACATTAATTTGCGAAAAACGACATTAATTTGCGAACACCGACATTTAATCTGCGAATGTACAAAAGCGGGCGATGGGACTCGAACCCACGACGTTCACCATGGGAAGATGACATTCTACCACTGAATTACACCCGCGAATTGCTGCCATAAACTTAGGGCTAAAATCAATAATATCACTATTTATAGCTGTTTGAAACTGACTAAAACATGCACTGTTTTGGCAATTACTGATGCATAAGTCC # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:-3, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCAACAACCATCCCGGCTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 2 381404-381654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000003.1 Nostoc sp. XA010 NODE_3_length_449485_cov_77.274923, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 381404 36 100.0 34 .................................... TTTTGGAGGCTTTGGAAACTCGACCAAAATAAAG 381474 36 100.0 36 .................................... TCTCAAGTGCATCCCCATAGAAAGATTCATCGACAA 381546 36 100.0 37 .................................... TATTTGGGTTGACAGTTAAGGTGAACCAGAGTTAAAC 381619 36 97.2 0 ...C................................ | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 99.3 36 GTTGCAAAACACCTTATCCCTTATAGGGATTGAAAC # Left flank : GGAGTTACCAAAAATTTGCTATTAGCTGGAATCAACAGAACGTGAGCAATGCTTTGGGGTAAAGTGCGCTCGAAGTAGCGGATAGTTTTTGGTGGTGAAGATGCAACAGTTGGTATTGACGGTGTTGAGAAACGCAAGTTCAACCACAACACCATTGCCAAACTAATTAATATCAAAGCCAATAGTTTGATTTTTCTCACATTTAAACTCACTTGCAGTTAGCTCAAACAGGACTTAGGCAATAATACTTCGCAAACTCTTATTCCTCCGTGTTCTCTGTGCCTCTGTAGTTCGATTTTCGTTAAAGCGATCGCTAATTTTTAACTGATAGTAAAAATGCTCTCAAAAGCCCTACTCGATTAGAACTGTCGCACACCTTGCTGTATAAGCATTTTAAAGACTTTTCACTCTTATAAGAGCTTGAAAACTTTGCTATTATGTACACATCCGCGAAACTAAACCTTAAAACCCAAATACAGCAAAGCTTTCAAAGGTCAGCC # Right flank : CGCTTGAAACTTACTAAATCTAAATCCCTATCGAGGATTGAAAGACGATGTTAGAAACCACAAACCTGAAAAATATCTCCAAAAAATTCGCTATAGCTAGAAATTATGCTTCTTTCAAAGAAAATGAGGCAATGAGAGCTATTGCTTATAGCATGGATTTACTACTACCTGGTTTGTATATATGGCTACTTGGTTTTAGTATTCGCATTGGTGGGAGCGTACCAGATGATATTCCCTATAAATATCCCGGTAAAATTCACAGTTACACTGGAATTGCTTTAGTATTACCAGGATATAGAATTTTTACGACTTACCAGGGTAGCTATGACCCTAAACAGACATCAAATACAGGGACTAACGGCTTTTAATTGTACGGTTCTTGACTCAAATAGTTTTGAAACCCTAATGACTCAGGCAGGGTATTCAATCTCAGGTAGCGCACCTGCACAGTCTAATAGAATAAAAGTATGGTGGATTCATAACCAATACCCAAGAGTCGA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAAAACACCTTATCCCTTATAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 65002-63597 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000005.1 Nostoc sp. XA010 NODE_5_length_380762_cov_79.348436, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 65001 37 100.0 35 ..................................... AAGTTGGTACTGAATCAACTTTACTTGACAATGAA 64929 37 100.0 34 ..................................... GTTTCATAGCATTAAGAAACTCACGGGAATAACG 64858 37 100.0 35 ..................................... ATAACGCGACTTGCTAAGGTGAGATTGCGGCTTGC 64786 37 100.0 35 ..................................... GACATAACTTGCATAATAACGCCCAATCCTATAAA 64714 37 100.0 36 ..................................... AAAGGATAGATAAATTGAGAATATCAATGTGGAAGT 64641 37 100.0 35 ..................................... AACCGCAAACTTACCCAGTCGGACATAGCGAAAAT 64569 37 100.0 34 ..................................... ATTATAAGGCACTGCGTCTACTCCATTTCTTCCG 64498 37 100.0 37 ..................................... TGTCTCCGGCGTAAATCTATTTGAGAGACACATTAAA 64424 37 100.0 34 ..................................... GATTATCCCACTCCTGCCAGCTTAGAAGATAGAG 64353 37 100.0 34 ..................................... ATTCAACCACGCTCACAGGCGAATCCAGGTAACT 64282 37 100.0 37 ..................................... ATCCCTATTTTAATAAGCCCATTAAACTCTGACTTAA 64208 37 100.0 36 ..................................... GCAAGTTTATGTCTAGCGGACAAAAGTATTGCTCTG 64135 37 100.0 33 ..................................... GCTTTAACACCCAAAGAGCAGGAGGCGATCGCG 64065 37 100.0 34 ..................................... AAGAGTAGGATAATCAGACTCAATATTCATTATA 63994 37 100.0 34 ..................................... TTGGGATTTCTTGCGCGAAAAATAACTTGCGGGA 63923 37 100.0 35 ..................................... TATTTTTTGGATCGTCCCGGTAAGATTTTGATTTT 63851 37 100.0 37 ..................................... TTTACGAGTTCCGCCGCCAACTGGACTATAAAACCAA 63777 37 100.0 34 ..................................... TGCATTACTCCGCCTGAAGCACGCCTATGGTTTT 63706 37 100.0 36 ..................................... TCTAAGGCTTTTACTATTGCCAGAGGGAATAAGTGG 63633 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ===================================== ================== 20 37 99.9 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAG # Left flank : TATTTCTTTCATCATCTCTACCTTGAATTGGCGAAAACTTATATTCTTTGTTATACGTACAGTAATACGATAACAAATACTACTATTTATGAATCAGTATACCGTCATATTAGCTTCGTTTGCTGTCCAAGGGTTCTTTCTCTGTGGCTGTTGTCAGGGAAAAGTCGGACGTATTGGCAAAGAAAAGCTATAGGACTAAACAATTTTCTGTGCTAAGTTCCCTTATAGTTAGGTTTCTGTATGGTCAAATGCGCGGTAGGGTAGGTGTACAAATTCCACAGCCGAAAAAAAGTGCTTCTATCTCAACCCCAGCAAGCATTTCACCGCACTAACGCCCAATTTTCACTCGCGCAAGCTCTAAAATCCTTACAATAAGTAGGTTTCAGCCTTCAACCTTTCCCGATACTCTTTCCAAACGAATTCTCTAATGCTATGATTGCTCTTGAATCGCGCAACCGCACCTTGAAAACTAAATATAGCTTGGGTTTCAGGCTCGCGCT # Right flank : ATTTTACAAAGAAAAGGTTTATTACTTTTGGGTCATTTTTTACCTCCTACCTGCTTTCCAATCTTCTCCACCGATTAGCTGAGTTAAAATTTCAGCCACAACTGCGGGTAACTCCTTAGCTGAATAGGAATAAGTTAGCGCCAAAAACTTCAACGCAGTGTGAATAATTTAGTTACTATCGACTATTTCAGCTAGTTGGAATTGATTATATGCTCCATTCATTACTTCCTCGCTAGCATAAGCGATCGCATCTTCAATCACTTCCTCTTCTATCAAAATTTTCCACTCATCTAAATTAATATAGTAAGATTTTTTATTATCTTTAATATTAAGTTTTTTAATTTCTCGGATTGAATTACGAATAGAATTTGCCCATGAACCAGTTAATCTTTGTTCTACTTGGTTCTTAATCAAATGAATCAGCAGAATCCTTAAATAAGCTTGAATATTCCGCAGAATAGCTTGTTTACTCATGCCTTCTAATTCATCTACAATTGCCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 2004-4177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000053.1 Nostoc sp. XA010 NODE_53_length_24072_cov_101.088453, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2004 37 100.0 37 ..................................... TCGGGAATACCATCATTATCGTCATCAGGGTCTTCAG 2078 37 100.0 40 ..................................... AATTCTCTAGGTACCTTTGCCACCTGATTCTATCCTCCAA 2155 37 100.0 37 ..................................... GAAACGCTTACCCTCCCAGCAGCAGACGAAATTAACC 2229 37 100.0 36 ..................................... TAAATTGCTCCTCATCTATTCCAAGCGAAATACATA 2302 37 100.0 37 ..................................... GCAAATTGTCTAACGCCTGGAATCTTATCAAAGATTT 2376 37 100.0 38 ..................................... CCCATTATTTACGCCTTACAACTAGCAAACATTGTATT 2451 37 100.0 36 ..................................... CTGAAATGTGAAGTCGAGTGGATAAACTTTTGCGTT 2524 37 100.0 40 ..................................... AATTTAGAGCAGCTAGCCAAACGCACCACGGGATTTTCTG 2601 37 100.0 37 ..................................... TCGCAACAAAACGCATTGGTTGAGCAGTAGCATATTT 2675 37 100.0 40 ..................................... TGCGATCGCAATATTCTCTACAGTCAGCCAGGACAGTCGG 2752 37 100.0 37 ..................................... ATTCTACTGGCCTTTTTGACAGTTCCAGGAATAACAG 2826 37 100.0 38 ..................................... ATTAATAGTAATTCTGATAGAAAAGGGTTAACCCTATT 2901 37 100.0 36 ..................................... GAGAAATCGGCTGGTGATGCATTAATTAAAGCGGCT 2974 37 100.0 34 ..................................... ATGCAATAGAACGGAAGCGCACGAAGCAGCCTAG 3045 37 100.0 34 ..................................... ATAAAAACAGGAAGTGCAATTTTCGCCCAATAAG 3116 37 100.0 36 ..................................... AAGCTTTTTAGCTAAATCCATACACTTTAACTGAAG 3189 37 100.0 37 ..................................... AGGTTAACCATGCCATAGTAGATATATAGAAACAAAG 3263 37 100.0 39 ..................................... AAGCGTTAGTCCGGGAATCTGTGTAGTTGATTTCGCCAA 3339 37 100.0 37 ..................................... TTGCAGTGGGAACTGCGCGACCAACCACATCAACCAG 3413 37 100.0 37 ..................................... ACATGGTTACGCGCCGATCGTTCACATTGTCTTTTAG 3487 37 100.0 37 ..................................... TAACAATGTTCTCCTAACGGGTACTCCGAAGTCTTGT 3561 37 100.0 33 ..................................... ATGTCTCGGCTTCCTTAGTGTGTTGATTTCTAG 3631 37 100.0 36 ..................................... AGAAATTTTGAACCGTTAACGTTGAAGTCAGTCTAG 3704 37 100.0 36 ..................................... ACGAAGGTTACTTATTAATGGCTTAATAAATTGATT 3777 37 100.0 37 ..................................... ACTTGGGCGATTCTAAGCTGGGTGAGTTGCGCGATCG 3851 37 100.0 35 ..................................... ATCCTGGACGTAACGGATTAAACGGTACTACGACA 3923 37 100.0 37 ..................................... CTTCCTGTCCTGGGATTGAGCGATGAAGATACACAGA 3997 37 100.0 36 ..................................... ACATCTACCCCATAAGCCGATCCATGTGAGTATTCT 4070 37 100.0 34 ..................................... ATTTTTGGTCTAGCCCTGACGCTGGCGTAACTGA 4141 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 30 37 100.0 37 GTTTCCAAAACCTATTACCCCGCAAGGGGACTGAAAC # Left flank : TTATTTGATTATTTATGATTTGCCTGATAACAAAGCTGCAAATAAACGTCGCACTCGCTTACATAAAATGTTATCTGGTTATGGGAAATGGACACAATACAGCGTTTTTGAGTGTTTTTTAACCGCGATCCAATTTGCCACACTCCAAACCAAAATAGAAAAATTGGTTAAACCTGAAGAGGATTCGGTACGATTGTATGTACTCGATGCGGGCGCAATCAAACGAACAATTACGTATGGTTCAGAAATCCCTCGACAAGAGCAAACAATAGTCTTATGATTATGTAATCGGCTTGATGATTGGCAAGTCGAAGCGGGGGCTAAAACTCTGGGGGGTCTGCCAAAATCGCCAGAACCTTGACAAATTAATAACTACAGCGTTTCAATAATTCGGGAAGTTGCAAATTAGTTGCAATAAGGCAGGCTGAAAATGACCAAAATTTTCGATCTGCCAAAAGCATTCCCAGGAAGCCTGCTCTATAACAGTTTCAGACCGAGCG # Right flank : CCTGTTTTGGTTTAATGAAGAATAGTTTTCCGATACACGAGATTTCCATTAACCAAGGAGCTAAAATTTCAAGCATCAACTGCGATCGCATTTGTTCAAACCAGTTTCCAACGAATAACTCTCTTGGCAGTGAGTTAATTGTTGTTTGGCTGTTGTTAAGTCAAAGAGGATGGAAATTGCGTACAATATTTAGCATTATTTGTAAAGCCCTAAGCAATGCCAAGAGCAGCTACATCTACTAGTGGTAAACCAAAGCCAAAGCAAAAATCTGTTGCCTCTGTTGTGACATGGGCAGATGAAACCGAATTAGTGGGATTAGTGTTTGAACTTGAGTCAAGTGCTTCTGCTTTGCTTTACTCGCAGTACACGATAGGGCTGCACGCGTGGTTTCTTGAGCAGGTACGAAAATTTGACCCAGACCTTTCAGCGTATCTGCATGATGGAGAGTCAGAAAAGCCCTTCAATATCTCAGCGCTGTCAGGCCAACTAGTTGCCAGTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAACCTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 5807-8231 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFX010000053.1 Nostoc sp. XA010 NODE_53_length_24072_cov_101.088453, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 5807 37 100.0 34 ..................................... TCATAATGGTAAGCATACCTAGCATAAAGCCTAG 5878 37 100.0 35 ..................................... TCTTAATCAATCTGTTTTAAGGAAATGATTAAAAG 5950 37 100.0 37 ..................................... ATACCAATTGCCATGAGAACTAAATAAACACCGCTAG 6024 37 100.0 36 ..................................... GCTAGTTCTCAAGTGGTAGGACTTGAGAAAAACTAT 6097 37 100.0 36 ..................................... AGAGGATCGTTACCTATACAAGAGCAGCAACTAGCA 6170 37 100.0 41 ..................................... CTAAGTGCTAGCCCTTCGGTTGATTGCAGCCCTCATCGCGG 6248 37 100.0 41 ..................................... ACGAGATAATCAAGCGGCGAATTGATGCGGTGCAACTGGCA 6326 37 100.0 40 ..................................... GTTACATTAGCTATAATTCCATAACCTAATCCGCTATCTG 6403 37 100.0 37 ..................................... TTTTAAGCGTATAATCTAGCTTGTTTGTAGGCATCAG 6477 37 100.0 35 ..................................... TTCTATTAGATGGTGAAACTGCCACAGAGAAGAGG 6549 37 100.0 37 ..................................... TCCTTGAAAACATTTCCCCCAAGGTATTCCTTGGGGG 6623 37 100.0 38 ..................................... AAACATAATTCCTGCTACTTACAAGCTAGCAACCACGT 6698 37 100.0 38 ..................................... ACTAAAATTTGTCATCGCGGATCTGAAATCCTTCTTTC 6773 37 100.0 36 ..................................... TTAACACCAGAGTTGTTATAGCCAGCCGATCCATTA 6846 37 100.0 38 ..................................... ATAGTTACGGTAGTACCTGCAACGTCAGCAAGCTTTTT 6921 37 100.0 37 ..................................... GCGCTTTCCAAACCATGATTAACGCTGAACTAGCCAA 6995 37 100.0 42 ..................................... ATAATACGGGTGCGATTCATCAATTATCTGAATTGCTTGCTG 7074 37 100.0 38 ..................................... TCATCAGCGATGATTCTGGCACGATCAGATAAGGGGAG 7149 37 100.0 40 ..................................... GAGAAAGTAAACGTAGTTTTTGTTATACCTATATATTTTC 7226 37 100.0 43 ..................................... ATCGAGACGGCACTAGTACAATTGAGCCATTGATAAATCCAGA 7306 37 100.0 37 ..................................... TTGTAGAAACGGTAACAGTCCCCGCTATAGTCACATT 7380 37 100.0 38 ..................................... GTTAGTAGAGTCCTTGGGGTCTTTGTTACGCTTCACAC 7455 37 100.0 36 ..................................... CATAACAGACGATTTTATTGTCACTCACAACACAAG 7528 37 100.0 35 ..................................... AATCGACTGTAGCCCAATACCTAGCTTATACAGTT 7600 37 100.0 36 ..................................... TTCCCGTATTTAGTAGCACGAACTACCTTACTGGGC 7673 37 100.0 36 ..................................... CTTCTGAGATGGGGGATGTAGTTTATCAATGTAAAG 7746 37 100.0 35 ..................................... ATTGAAGAGTTCAATTTAGCGGGAATAACTACCGA 7818 37 100.0 38 ..................................... CTTTTGTACTAATCATGCTTTTGAGCATGGGTTTTGTT 7893 37 100.0 35 ..................................... GCGGATACCTTAGTTATTAATCACTAAAGCAAACA 7965 37 100.0 37 ..................................... ATTCAAATCCCAAGCGGTACTCTAATTTACGAGAGGA 8039 37 100.0 45 ..................................... AATACAAACATAAGAACGAAGAGATAACTAAGTTTATCCATGAAA 8121 37 100.0 37 ..................................... ACTTTGGAATCAGTAGGGGTTTTTGCTGCTACTCTAC 8195 37 83.8 0 ........A.......................CTTCG | ========== ====== ====== ====== ===================================== ============================================= ================== 33 37 99.5 38 GTTTCCACGAACCAAATCCCCTCACGGGGACTGAAAC # Left flank : TGCAAATCTGCTTGGAGAGCGGATTGAAGAACTGACAGAATTATTTACTGCACAACGCAAACGCACAGGAGGGCAGCGTACTGATAAAATTGCTGTCACCTGGGCAACGATTTTGGCCCGGCGAGAGATGGGAGAATCATTGAAGGCAATCGCCGAAGATTTAGAGATGCCGATGTTGACCGTGAAAAGTTACGTAAAATTAGCCAGAAAATCGCTGAAACAGCAAAGCAATAGTTGAAAACCTTTGCTTGTGGACAAGGATAAATAATTACCTTATGATTATGTAATCAGCTTGATGAGATGGCAAATCGAAGCGGGGTCAAAAACGCTGGGGATCTGCCAAAATCACCAGAACCTTGACAAGTAAATAGTTTCACAGTTTCAGTGCTAAGGGAAGTTAAGAATTAGTCGCAATAAGAGCGGCTGAAATCGACCTATTTTTGAGGTTCGCCAAAATGCTTCCTAGGAATCCTGCTCTGTAACAGTTTCAGCACCGAGCA # Right flank : GTTTAACTGTGCATTAGTAATATCTGCTGTATCTTGTTTGAGTCCTAAAAGAAGCAAACTTGATGTGGCTAATGTAGAAAATGTAACGACCTTAACCAAGAGCGATCGCTATATTTATGAGGCACGTAGTTCATCGTACCGGATCAAATGGGAATCCTGGCTATAGTCGCATTTCGCATCGTTATGAAAATCTTGAACTTTCTCAAATCTAAACCAGCCCAACCGACCATTGAAAGTTATGGGCAAACCAGTAGCGGTCTTGAGCAGCAGCAGATTCAGTCAATCATGGAATGGTTATCCGCAAGTTTGTTGAATGCAAAGTATTTTAGAAAGTCGCATATTATTTGGTACAACAGCGATAAGCCAGACCCCAGTTTGGAGCAGGTAATTAAGAAAGCCATGCACTCCTGTGAGCCAGTTTTTTTGTACCATAGGCTAAGTAGTGTTTACCAAAATATTCACATTCGGCGTTGGCACATTTTTTCCCCTTGCCTGCCACA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACGAACCAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //