Array 1 403679-405347 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIXG010000004.1 Parabacteroides merdae isolate MGYG-HGUT-00044, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 403679 32 100.0 34 ................................ CGGGAACGAATGTAAGCAGAACCAATGCCACCAC 403745 32 100.0 33 ................................ CCCTCTTGATAATATAAGCGCAACTGACATGTT 403810 32 100.0 32 ................................ TTTTTACTCATATCATCAAACAGCCGGGTGAT 403874 32 100.0 34 ................................ CCATCTATATCACTCTTGAGGGAGATACAGTGAG 403940 32 100.0 33 ................................ ATTTGCTGAAGAGCTGGATGCATACGGGAAACT 404005 32 100.0 34 ................................ TGTAAACTGCCACTTTACTACAGAATCCCCTTTG 404071 32 100.0 38 ................................ AATCCTTTTCATTGGCCAGAGTAGCGGCAACATTGGCT 404141 32 100.0 35 ................................ AATCAGCCTTTCAACGATGTCCAACTGAAGAGGGC 404208 32 100.0 34 ................................ AGGGGGAACGCCCAAACCGGAATCGACAGAAAAA 404274 32 100.0 34 ................................ GCACTATCCACATCCAAAGTCGCAACTTCTCCAA 404340 32 100.0 33 ................................ TACATCTTCTACTCCCGTCGAAGATGAGGGTAA 404405 32 100.0 32 ................................ TACCCCTACCGCTTTGATGTATGCTAATTGGC 404469 32 100.0 33 ................................ CATGATAGCGCGAACAGCCAAGGCATTAGCTTT 404534 32 100.0 33 ................................ TACCCTCAACATACTCCTGATAAATAAAACGTA 404599 32 100.0 34 ................................ ATAAAACAATCACTCTAAACGGGGTACGACAACA 404665 32 100.0 33 ................................ AAGATAACGTTGATAAGCATTAACATTGCGAAA 404730 32 100.0 33 ................................ ACGCTTAAGGGGGTTACAAAACTCATCCGTATA 404795 32 100.0 33 ................................ GGGCATATTCAAAGCATCATAACGGACATTAAC 404860 32 100.0 33 ................................ GCTGACGCTCATTTGGTATATTTCGCCACGCCT 404925 32 100.0 33 ................................ ATCTTATTTGAAATCGAAAGATTATGAGACAGT 404990 32 100.0 34 ................................ ATCTTTGTCTGGATTGGAAACATCATAGGCATAA 405056 32 100.0 35 ................................ TTACAGCGAAATAAGCGGAACGCCGAACTTGTCTG 405123 32 100.0 33 ................................ AGGCGCAGCCTATTTAGCTGCACCTGGTTAAGC 405188 32 100.0 32 ................................ TCTGTTACTGAGGTTTCTGATAAGATTCTTGG 405252 32 100.0 32 ................................ AAAGCATCAGGAGAAACACCAGAATATACATG 405316 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 26 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CCACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.40,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 411028-412636 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIXG010000004.1 Parabacteroides merdae isolate MGYG-HGUT-00044, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 411028 32 100.0 34 ................................ GACGGGGGTAGAAGACATAGAATAAATAATACGA 411094 32 100.0 34 ................................ GACATCTACAGGTAAACAGTCTGCAGAGCAAAAG 411160 32 100.0 33 ................................ ATTTTTGTCTGGATAGGGAACATCATCGGCATG 411225 32 100.0 34 ................................ AAAAGAATAATAACAACTCTACTCAAAGTAGTGG 411291 32 100.0 33 ................................ GAAGAAAGAAGGTGAGGTTGCCTCCCTTAATAT 411356 32 100.0 33 ................................ TTTAGATTTTAAATAGGACGAAGGGGAGGGTAT 411421 32 100.0 33 ................................ TTATCCGATACACAGGCGACAATTTCGTTTTCT 411486 32 100.0 35 ................................ TGGCATATTTAGGGCATCATAACGAACATTAACAG 411553 32 100.0 35 ................................ ATCTTTGTTTGGATCGGGAACATCATCGGCATAAA 411620 32 100.0 34 ................................ GTCGCAGAACACAGAAATACTACCATCACTATTA 411686 32 100.0 32 ................................ GCATCTGTGTACTGGAGCGCGTTTACGTTATC 411750 32 100.0 34 ................................ GGAAAGATTAACTTTCGCGTCAGTCTCACGTACA 411816 32 100.0 34 ................................ TCCTGCAAGCCAGCATTAAATTCAATACTCATAT 411882 32 100.0 33 ................................ TGAGGACACAGACAAACTAAGTGATATCCCTTA 411947 32 100.0 35 ................................ TGTTAATGAAGCTGGTCATACGGTTACTACCGTTA 412014 32 100.0 33 ................................ GTGCCATTATGGAGACAGAGACTACTGGCTCCG 412079 32 100.0 33 ................................ CAATATGAGCCAAACCACATATATGGGCCAGAA 412144 32 100.0 34 ................................ TCATCAATCCCGAGGCCCGTAAAAAAGCCTTGGA 412210 32 100.0 34 ................................ GAGAGAAGGATTACTTAAAATCTCGTCCTTTCGA 412276 32 100.0 33 ................................ ATACCCCTGTCGTTCAATCGCAGTCTGCGTTTT 412341 32 100.0 34 ................................ AATACTATACGGATGAGTTTTGTGACCCCTTTAA 412407 32 100.0 34 ................................ CGTTATATGTTTTATAACATATAGTCGGTTGTTG 412473 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 412539 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 412605 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ =================================== ================== 25 32 99.4 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : AGAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //