Array 1 462276-463434 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACTLP010000002.1 Listeria welshimeri strain FSL W9-0263 NODE_2_length_470580_cov_63.332212, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    462276	    36	 100.0	    30	....................................	TGTTGCTGAGTATTGTTCTGTTGCCGTTCT 	
    462342	    36	 100.0	    30	....................................	TAAGAAATGTCGGGATTGGTAATGACCGCT 	
    462408	    36	 100.0	    31	....................................	TTCTCAATATAAGGTATTACCTCAGTCCCCG	
    462475	    36	 100.0	    30	....................................	TGTTTCGGGAATTAATGGTGTTCAAGGGGC 	
    462541	    36	 100.0	    30	....................................	GAGAATTCCGGAATAAATACCAAAAATGCT 	
    462607	    36	 100.0	    30	....................................	TGACCGAATTGTTATTTTCTGTTCGAAAAT 	
    462673	    36	 100.0	    30	....................................	AAAGCTGTTCGTTTTTCCTCGTAATTTACA 	
    462739	    36	 100.0	    30	....................................	TTTTGAGTTCAACAAGTCTATATACGCGAC 	
    462805	    36	 100.0	    30	....................................	CTAGGAGTATAGAGGAAGCATTGCAGATTG 	
    462871	    36	 100.0	    30	....................................	CACTTCCTTGATTAACCGAACATCTAATTG 	
    462937	    36	 100.0	    30	....................................	TTGGTAACTTTTCACTAGGTAAATTAACTA 	
    463003	    36	 100.0	    30	....................................	AATAGTTGCTGAAAATAAGAAAGACCCGCA 	
    463069	    36	 100.0	    30	....................................	CAATCCGGAACATCGAAACCCTCGCCTATA 	
    463135	    36	 100.0	    30	....................................	TATCGTAAATGCAGAAAACACGAAAGCTGT 	
    463201	    36	 100.0	    30	....................................	GAATAAAGATTGGGATAAATTAGTTGCACT 	
    463267	    36	 100.0	    30	....................................	CACTAGTGTACCTCGAACACCACGAAGAGC 	
    463333	    36	 100.0	    27	....................................	GAATATTCTCCCCCATCGCTAACAGGG    	
    463396	    36	  83.3	     0	............CA.....C.....T.A.......G	|                              	A,A,C [463421,463427,463430]
==========	======	======	======	====================================	===============================	==================
        18	    36	  99.1	    30	GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	                               	       

# Left flank :   GACAAATTAACCGCGACGATTAGCGAGTTGATAGGTTACGAATTATTGGAGCATGAACTGGATTTAGAAGAAGATGAAATAACGGTCATTGAATTATTCAAAGCTTTAGGAATAAAAATAGAAACAAAAAGCGATACCGTATTTGAGAAGTTAATTGAAATAGTACAAGTCTATAAATATCTATCTAAAAAGAAATTGTTAGTACTTATTAACGTGTGTTCCTATCTTACAGAGGAAGAACTGCTAGAGTTGAGACGGTATATCTCTTTATATCAAGTCAAAGTACTATTTATTGAACCTAGAAAAATAAAAGGATCTTCGCAAGTTACTTTAGATTCTGATTATTTTTTACACGTAGAAAATAGTGTATAAGGTAACCGCTGTTCTTTGAAAACAAAATAAATTTTATGTAAACCATAAAATAGCATTCAAAATTGAAATCTTGCTATGGATGAATGGCGCGATTACGGAATCTTGGAGGAAAGAAAAAATTCTGCGAG
# Right flank :  GATAAAATGCATCGCAATTACAAAACATGGTTAAATTTAAAAAGGAGTTAGGTATCTATATGACACAGTATCACTATCTTACTTCGAAGTCGCTCTTAGAAAATGATGGGGAAAAGTTTCCTCGTCTTTATATTAGACTTCTTAAATTTGAATTTTGATATGAATGTTGACCAAGACACTAATGAATTGTTTTTCTATTCAATTGATTTGAACTCAGCTTGTAAATTTCAACTTGCTGTAAGTAAAGAGAACCTGCCGCTGAAAGGTAATTGGCAAAAAAATTGTTACGAGACTTAAAATTTAAAAATCTTGTATGATTATATTCTAAATACAAGTAAAGATAATGAAACGATTGAACTATATACTGCTTGAAACAGCGAGGAGGATTTCCTGTTTTTGAATAAAACAGAACTGCTGATCTAGAATTTAACTATCGAAAATCTAATTTTAAATGACAGAGAACTATTAATAATTAGAAATGAAAACCGATATAACTTTTA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//