Array 1 66551-65931 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHHO01000021.1 Brevibacillus borstelensis strain NRRL NRS 818 contig_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 66550 36 100.0 37 .................................... AAGTGAAGATGACGGCACCAGAACTGGCACCACAGGC 66477 36 100.0 35 .................................... TAAGGAGGACACAAAGTTATGCGTATCTTCTCAAA 66406 36 100.0 39 .................................... ACTATAAGGATTACTTCAATGTTGGATCATACAAAGACA 66331 36 100.0 37 .................................... CTTCATTCTCTTTGCGTTTAGCTTCGAGAGCGGAAAG 66258 36 100.0 34 .................................... CAAGAATTTCTTAATGCCAACCCAGTAGACAATT 66188 36 100.0 39 .................................... TTCACAATTTCGAAAATCACCCGCAAACCCGCGCCATTA 66113 36 100.0 36 .................................... TGTACGCAAGGATATATTGTAATCAGGAATTTCGAC 66041 36 100.0 36 .................................... TGTACGCAAGGATATATTGTAATCAGGAATTTCGAC 65969 36 100.0 0 .................................... | CT,T [65934,65938] ========== ====== ====== ====== ==================================== ======================================= ================== 9 36 100.0 37 CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Left flank : TGGGGATTGCTGTTGGAATATTCTTTTTCATCCTCTTCAAATACATGTTTACTAAAAATAGAACTACTTTACGGTATAAAGTTTGGGAGTATGTTATTCTTGTGATTGTCATTTGGGTGTTAAAATCACTTTTTAATATTTTCCTCTAATAGGTTGAACAATAGTAAGAAACCCTCAAAAAGGAGTTTGCGTTCTAATTTAGGGGATTGGACACGCTCCACCCTCATAGTGGTGAACATTGTAATTCGATTCAAGTACCAAGGTCATTCTTGAAACAGAACCTGAAAAAAGTATGATGAGGCCGTTCCTGACAGGGTTTGGACGATTATCCTGTTTAGGTAGGTGCTTGAAAATTAGGAGGAATACTGGTAAATCAATAAGTATGGGTATTGCATTCCTATAAAAGAAAGGGCCTTTTGTAAAAAGTGAACCGCTTCGTCAGAGGTGCTTGAAATGAAGGGCGTCTTTCCCATATGTATCAAGGGTTTTTTGTGGAGGCT # Right flank : TGTCCATAAAGCGAAGGCGTGGCCCTGCAGCCAACAGCGGCTAGAAAGCCACGCCATGTACATGCCAATTTTAGTAATTCCGCCCCATACGCTCAGCAGACGCTCTCCGAAACATCACCCCAACAAACCCGCCACATCCCCAACCCGAACAACCCCGGTTTCAACCACAGCCGCATACACTCCAAAGCAAGCCTCCCGACTCGTCGCAAGCGTCTTCAACAAGCCAGGGTCAATCGAGTAATCCCCCGGATCAATATTGACCATCGAGCAGCGCTTGCACTTTTTGTACACTTCCACGACTACCTCGCCAATCTGAATCCGCCGCCCGATCCAGTCCTCCTCGGCAAATGGCACTCCATCTGCTTGCTCCAAGACGATATTAGGCCTGAAACGAAGGGGGTCCACCGGTTTTCCCCACATCTGCTCCAATGCCCGTACGGAAGCGTCTGTCACGATCAGCAGCTGCGCCTGATCGACGCCCATCAGCTCATCCTGCGGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 50302-50995 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHHO01000029.1 Brevibacillus borstelensis strain NRRL NRS 818 contig_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 50302 36 100.0 36 .................................... GCTTCTTATTTTGTGCCGATCAATACTGTGGTTTTT 50374 36 100.0 38 .................................... AGTTTTGGAGGGTGGGAATAATGCCTTATTTCGCACCT 50448 36 100.0 35 .................................... TCGATGATTTGCACACCTATATTAGCGGTTATCTC 50519 36 100.0 39 .................................... ATCATGCAACTGCTTTCCACGGGTAAAATTTCAATCGCT 50594 36 100.0 36 .................................... ATCTTGAGGTGATCATGGATTCGCTGGTCATTCGCC 50666 36 100.0 36 .................................... CTGTGCAACGTTTTTAAGGATTTAATGCAGTACAAC 50738 36 100.0 41 .................................... GACAGATTCAGCCAGGGGCTTGCTGACCCGCAAGAGGCTAC 50815 36 100.0 36 .................................... TGGTCAGTACGATGGAATCCCATTGCTGGTACAGTC 50887 36 100.0 37 .................................... AACAGTGAATGTGTTGAAAATCGCCGTTGATGCCGGA 50960 36 97.2 0 .................................T.. | ========== ====== ====== ====== ==================================== ========================================= ================== 10 36 99.7 37 CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Left flank : AGCGGTGGAAGAAGTGTTTTCGACTCATGAAGGGTTACGGAGAGAGAATCCAGTACTCGGTTTTTCAATGCTATTTATCTGAACGTGCCATGGCTCAGCTTCGTTGGGAGTTGGCCAAAATCCTGTCAAAGGAAGACAGCTTGTTGATTGCCCCGATTTATGCTCCTGACCAGAATAAAATCATACAGTGGAACATGAGCGCCGAATGGAGTCCGGATCGGGAGCGGTTCAAAACGTTGTAAGTCGTTTCAAGCACCAGGATCATTTTTAAGACTGAACCCGAAAAAAGGTTGATGAAGGCCGTTCATGACAGGGTTTGGGCCAATATCCTGTTTAAGCAGGTGCTTGAAAATCGGGAGGAATACTGGTAAATCAATAGGTATGGGGATTGTATTCCTGTGGAAGAAAGGGGCCTTTTGTAAAAAGTGAACTGCTTTGCCAGAGGTGCTTGAAATGAAGGGCGTCTTTCCCATGTGTATCAAGGGTTATTTGCGGAGGCT # Right flank : CCTGCCCCAATTAATCTCTCTGGTCACACTTATTAAGGGAACTTGTGGAACTCCGGCATGAAAAAGGGGAAGGACTTGTTACTTCGGATGTCAACACCAAACTAGGAAGTTTTCTTAAGTGCCTGCTCTTTGTAGGCTAATGGGCTGAGATAACCCAATATCGAGTGAATTCTTGTTTCGTTAAACCACTTGGCGTATTTTCCTAGTTTCTAGCTTCAACTATGTCAGCGACTCAAACTGTCGATTCTTTACGAACTCTGCTTTGATCAGCTTAAAGGTTGCTTCCGCAACTGTATTGTCATAGGGGCAGCCCTTCATACTCAATGAACGCTTGATCTTGAACGTGTTGATTACTTCATTAATTGTACGATTTTTAAACTGACTTCCACGATCAGTGTGAAAAAGCTAGATTTGGCGTAGATCTCCTTTTACACTTGCAAATACTTCATAGACTAGTGCGGCTTGAATTTTCTGCAGCCGTGACCGATTAAACAAGTAAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAAAGTAGCTGTGATGCTGAAAAGCGTTTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //