Array 1 47384-50355 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTH010000018.1 Acinetobacter baumannii strain A39 P_contig000018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 47384 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 47444 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 47504 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 47564 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 47624 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 47684 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 47744 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 47804 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 47864 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 47924 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 47984 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 48044 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 48104 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 48164 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 48224 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 48284 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 48344 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 48404 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 48464 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 48524 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 48584 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 48644 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 48704 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 48764 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 48824 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 48884 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 48944 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 49004 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 49064 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 49124 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 49184 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 49244 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 49304 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 49365 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 49425 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 49485 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 49545 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 49605 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 49665 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 49725 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 49785 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 49846 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 49906 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 49966 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 50026 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 50086 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 50146 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 50206 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 50266 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 50326 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 50 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //