Array 1 2447126-2449734 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049913.1 Vibrio sp. HDW18 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2447126 28 100.0 32 ............................ TGCGCGGCCTGATTCGTCCCAATTCTCACCAA 2447186 28 100.0 32 ............................ AATCGGCGACGCCGCGCTCGGCTGCAAGCAGC 2447246 28 100.0 32 ............................ CAAGCGCTTCGAGTGCGCTATTTAACCCTTGG 2447306 28 100.0 32 ............................ TCCCAGTCAGCGTACACAGTTGACAGATCGAT 2447366 28 100.0 32 ............................ ATTCCAAACTCATCATTTAGCTGGTCAAAACT 2447426 28 100.0 32 ............................ AGCAGATGGCGTCGGAATTCCAATCGGGAATC 2447486 28 100.0 32 ............................ GAACAGTGTTGGCGGCATGATATTTCTCGACT 2447546 28 100.0 32 ............................ AAGCAGCAGCACGCCGCCATCGACAAACACGC 2447606 28 100.0 32 ............................ ACGCTGGAAGTCAGTCACGCTGAATTCAAACG 2447666 28 100.0 32 ............................ CGCAATACCTCAACGCCGCTGATCACAAAGCC 2447726 28 100.0 32 ............................ TGTATGTAGCTTCGCCGATGCTCGACAGCCTG 2447786 28 100.0 32 ............................ GCCTTTGGGGTCAAATCGACTTGGTAAGTTCG 2447846 28 100.0 32 ............................ CCAATATGCATTAGCGTCACTGGTGCGCTCGC 2447906 28 100.0 32 ............................ AGTAGCGTCGGTGATTCGTCATCAAATAACAT 2447966 28 100.0 32 ............................ AACTATAGCCACCAAATTAACCATTTACCGTG 2448026 28 100.0 32 ............................ AAACCGGTCTATCGTTTATGATGGACGCAGGC 2448086 28 100.0 32 ............................ TGAGTTGTCATAAGCGCCGTAGCACACCATTG 2448146 28 100.0 32 ............................ TATCCAATGCATTCATGGGTTTGGCGGTCAGT 2448206 28 100.0 33 ............................ CCATAAAAGCCCTAAAATACCTTTAGGGCTTTT 2448267 28 100.0 32 ............................ GCCTACATAATCATGCTCATATTTCGGATTAT 2448327 28 100.0 32 ............................ AAGCTCTAGCACAATGGCTGAAATAACATATT 2448387 28 96.4 32 C........................... TGCTGCTGTAACAACCGTGAAATCCTGACCGC 2448447 28 100.0 32 ............................ CAGCTCGCACGCTAGGTATTCTTGAATGCCAG 2448507 28 100.0 32 ............................ AACCCTACAGTGGTTAGCATTGGTGCGGAAAC 2448567 28 100.0 32 ............................ TTAGAATCACAAGAGGAATCAACACCACTCCT 2448627 28 100.0 32 ............................ TACCCGCCAAGAGACGCAGCTTGTGAAGACGC 2448687 28 100.0 32 ............................ AAAGCACGAAAGCCCCAAGCGGCGAATACTGC 2448747 28 100.0 32 ............................ TGCAGATAGCTCTGAGTATACAGAGGAAAACT 2448807 28 100.0 32 ............................ ATCTCGAACCGCTGACAGCACCGGGCCCTTAC 2448867 28 100.0 32 ............................ ACACAATCGTAAGCCTCGGTGGTTGACGCGAA 2448927 28 100.0 32 ............................ AGCCATAGACCATGCTTGGCACGGAAATCCAC 2448987 28 100.0 32 ............................ AGAACGCGCTCGCAGACACAGCAATGTTATGT 2449047 28 100.0 32 ............................ AACTATGACCCAGCGCCGGAAGGGTCGGATTA 2449107 28 100.0 32 ............................ AGATCCCGATGATGCTTTAATGTGGCCTTATG 2449167 28 100.0 32 ............................ TATTGTGCCTAAAAAAGCGATTGAGGCCGCAC 2449227 28 100.0 32 ............................ TCAATGGCATACACCACTGTCACATACTTGGT 2449287 28 100.0 32 ............................ AAGCATTAGCAAAAGACCAGAAGAAGCTTTAT 2449347 28 100.0 32 ............................ ATGATGTTGGTGAAAAGCGTGAAAACGTCTTT 2449407 28 100.0 32 ............................ AAAAGGCGCTCACAACAGCTATGAAAGGCGCG 2449467 28 100.0 32 ............................ TTGCGGGTAACACTCGCAAAGCCACGGTTTTT 2449527 28 100.0 32 ............................ GGACAGGCTAAAAGGATCACAAAACGATCAGA 2449587 28 100.0 32 ............................ ATCAGTGCGGTTTTTACCGTGCCTATCATAGT 2449647 28 100.0 32 ............................ TGCGGTCTAGCTCCATGCTCTGCTTGATTTGA 2449707 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 44 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGGATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGATAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCATTTAAAACAAATGGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCTTGTTGCAGATTATTTTTATCGGTTTATTCTATT # Right flank : AGTAACATCGGTCATTGTTATCACCGATCATGCAAAACCGCCCAGCTTACTTATGATTGTCTTGATGGTTATTGGTTGTGGTATTGACTCCTTTTTCTTGTAAGGAAATTCCTACGTTTCTGCTTGTTGACATATCGCATTGAAAAATCAACCATTTCATTTGAATCCCTTATTAAAAAACAATAGGTCAGAATGATAAATACAAAGCTTAAATTGATCTCAGCAATGGTTATGTTGGCCCTGTCTGGATGCAATCATGATTCCATGCCAATCGACCCCCCTAGTGTGGGTGGTGGCGAATTACCGGATATAGGGGTTGATGACCCGATTATTGCGGCTCAGCTCTCTTTGGATGGTAACCTGATCTTTGGTGGTTCAGTATTGTGTAATGATGCGCCAGCCAATCAATTTACAGTGCCACAAAAAGGCAATGTGATCTGTACCGTTGAGGGGCTAACGCTGGCGACGTTTATTGCTCCTTTTGTGGGAGAGGAGAGTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //