Array 1 36152-40333 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBQT01000008.1 Syntrophomonas wolfei subsp. methylbutyratica strain JCM 14075, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 36152 30 100.0 35 .............................. CCTGATATTGAAGTTCCAGTGGATGATGACGACGA 36217 30 100.0 36 .............................. ATGAGAACGGCTATAAAGACGAACACTTTATAGCCT 36283 30 100.0 36 .............................. AGGATAGCTGGAAAGATATCGCGGGGTATGCCATCC 36349 30 100.0 35 .............................. AGGCGTTCTGGAATGTTGACGGCCAACCGTGGCTT 36414 30 100.0 36 .............................. GGAACAAGGCCCTTTTCGTGTGGGAGACTGGGGCGA 36480 30 100.0 37 .............................. TTGTTTGCCGTTTTTCAGCCACTTTGTCCACCACCTT 36547 30 100.0 37 .............................. TTCTTTCTATGTTTTGGTTGCGCGAAAGCTTATCAAC 36614 30 100.0 34 .............................. ATAAAATATTCTTGTTGCTCTTCTAAACTAAAAA 36678 30 100.0 36 .............................. ATGTAGTTTATGACAAGGTTTTAGAAGTCTATACCA 36744 30 100.0 37 .............................. AATATCAACTTTCCTTTCAGAGTCAAACATCTTACCT 36811 30 100.0 37 .............................. TCACCACCAAAGAAATGTTTTATCCAGCTTGTAAATT 36878 30 100.0 37 .............................. AAAAGAAAGAACAGGAAGGATTAAACCAAGCAGAGAT 36945 30 100.0 35 .............................. ATTGTTATGCCTTGTAAGTTTATTAGTTTGTCGAT 37010 30 100.0 37 .............................. CCAAAACAGGCACAGGATATTACTACCAAGTAAACAA 37077 30 100.0 36 .............................. AATGATGTATAATTTCTTTCAAGTGCCCCATAAACA 37143 30 100.0 36 .............................. AGTCAGTTAGTCAATAAGTTGTGGGTTAAGGGCGGT 37209 30 100.0 36 .............................. AGATTCAAAGGAACATAGAATGCGTTTGATTGATGA 37275 30 100.0 36 .............................. ATTCTTGGCATCATGCAAACATGCATGCAAACAAAA 37341 30 100.0 36 .............................. TTGAAAACAGTAATATCTCCATATACAAATGGTTCT 37407 30 100.0 33 .............................. CATTTTTTAACTCCATTTATTACTCTGTAACTT 37470 30 100.0 36 .............................. AGGGATAGGCAAGCATGAACTGTTTACTTCAACACT 37536 30 100.0 35 .............................. GTATTCTTCTTCGTATGTTTCTTTGATTAATTCAA 37601 30 100.0 36 .............................. TGAAATAAAGGAAGGGAGATAAGGGTATAGAAATTA 37667 30 100.0 35 .............................. TACACAGAAACACCACTTATTAGGGCGGTGCTATA 37732 30 100.0 35 .............................. ACGTTACCAAGTCCAACATCATCCTTCGTTACCAA 37797 30 100.0 35 .............................. AGGGTTGCTTTCATGGATGTAAAACTTGATGTAAT 37862 30 100.0 35 .............................. CCAGTAAAGTAAAACCATCACGGGTCAAGAGGTAT 37927 30 100.0 36 .............................. TCGGTCTTCGGCGGGACTATGACGGGCTCTATAAAT 37993 30 100.0 35 .............................. ACTGTCGCATAGTTTCGGACAAAACACAGGCTGCG 38058 30 100.0 37 .............................. AAGGCCAAATTATCCTCAATTGCTTCCGGGGTTACAT 38125 30 100.0 36 .............................. AAATCAGTTGAGAGGCCAACTTCTCCTGAAGCTTCT 38191 30 100.0 35 .............................. AGCCTCATATTGGGGCAATACCATTACAAGATTTG 38256 30 100.0 35 .............................. TACAAGTCAATTTCATAATATGATGGAGCTTTTCC 38321 30 100.0 36 .............................. ATCAGTTCCCGCTTAATCTCAATGCCAAGTTTCCAT 38387 30 100.0 35 .............................. AAGGCCCAATTAACGGACCTCGTAATGAGGTTTAA 38452 30 100.0 36 .............................. TGCTTTGCTGCAAGTAAGGTTATTTATCGCTGTATG 38518 30 100.0 36 .............................. CTGGGATAATCTATCGGATCTAAAATTTTGATTATC 38584 30 100.0 37 .............................. CTGATTTTTTCACGTCTTATCTGTTCGTTTTCCTTTT 38651 30 100.0 38 .............................. CTCGTCCTCCGGCAACTGTTCGAGTCTGCCTATATATC 38719 30 100.0 36 .............................. GTCTTACGTATGCTTGTGCCATGATTTTTCCTCCTA 38785 30 100.0 36 .............................. CGATATCCTCTCCTTCTAACCCTCAACAGGTTCGTA 38851 30 100.0 37 .............................. CAATAAAGCACCCCCGTTTAAGGCTTATTTTTTCCCC 38918 30 100.0 37 .............................. AGCTCCTTCAAAACAAGAAACAACCATTTTCCCGCAT 38985 30 100.0 35 .............................. TGTAGGTGGTGCCCAGACGGTCGAGAGAGAAACGA 39050 30 100.0 36 .............................. AGTATGCCCCCCTCGCGCACCGAAGAATACCACCGG 39116 30 100.0 37 .............................. TAACAGCAGATGAGGACATTCAGGAACCGGGAGAGAG 39183 30 100.0 35 .............................. TCCTCATTCCCAGCGCCTCCACACCCTATGTAATC 39248 30 100.0 36 .............................. CCGTTTTTGGCAAATCCCGGTCAGTTTGCGTATCCA 39314 30 100.0 36 .............................. TCGCTACACTCTTTGAGCCAAATTTTGAGTCTGTTA 39380 30 100.0 36 .............................. TGTGGTTTTCCCGTCACCCGGCGCTAGCAAGCCAGG 39446 30 100.0 36 .............................. TACCGCCGCCGGTAGTCCTCCCGGCACTTCGAGCAG 39512 30 100.0 35 .............................. TAGGCATTTCGGCCAGAGTGCAGCTGGTACCGAAA 39577 30 100.0 36 .............................. AATTCCTCTACGGACGATAGCTGCCTTGCAGGCAAA 39643 30 100.0 37 .............................. TACCGCCGATGCTGGTCCTCCCGGCACTTCGAGCAAT 39710 30 100.0 37 .............................. AATACACTGCATTTTAATCCCCCCGCTTTACATTTTT 39777 30 100.0 35 .............................. TGATATACTGTCCATGACGGCTCTAACGGGGCCGT 39842 30 100.0 36 .............................. TAGGCATTTCGGCCAGAGTGCAGCTGGTACCGAAAA 39908 30 100.0 36 .............................. AAAATCAAATTTGAAATTTGAAAGGGGTTTTTAGAA 39974 30 100.0 34 .............................. ATTAGGTAGCAATAGGTTTAATAGTATAGCACAA 40038 30 100.0 36 .............................. TTCGATACGGATTGTCGAAAGTTTCTTTGCTATATA 40104 30 100.0 36 .............................. AGCCGATGCGCTTTGCTTCCCGGTCGAGCAGCAGCC 40170 30 100.0 37 .............................. TCAGGTCAACCTGGCGGATAAACTCCAGGGCTACCGG 40237 30 100.0 37 .............................. TGGATATTGAATTGAAACATTATCCTCTGAGAGATTT 40304 30 93.3 0 ............................GA | ========== ====== ====== ====== ============================== ====================================== ================== 64 30 99.9 36 GCGGAACCGGCACATTTGATGTATTGAAAT # Left flank : AGAAATTTATCCCATTTTGCATGGAGGATAAGAAATGAAAAATAAACTAAATTACAATTATGTCATCGTTTTCTATGATGTTGGCGAAAAACGGGTAGCCAAAGTTTTCAAGATTTGCAAACAATACCTGAAACATTTTCAAAAGTCTGTTTTCAGAGGTCATATCACACCTGCCAATTATTTGGAACTTAAGGGAAAGCTTTTAAAAGTGATTGACCTTGACTATGATTTTGTAACATTTATCCAAACGATAAGTGATTCCTCTTTTAATGAGGAGAGTATTGGAAATACGGGGATTAACCCGGAGTCGATTATTCTATGATTTTTTCCAACCCCGATTGCATATTAACAGGTCGTAAATGGCTAAAATACTGCGGCGAAGGTAGAGGTACTATTATTCTCTTAGGAATTAATTGCCGCTTGGAAAAAATGGAGGGAAAGTCTGATATAATGTTAATTAGCAGATTAGTTTAACTTCAAAAAAGTCTGATTTTATCCTG # Right flank : AAACTGGTTAGGTTGATGGTTAGAAGGGTTGTTCTTGAGCTTTTAGTTGGCTTTTTGATGGAGAACAGGGCGACGAGTTCTAATCCCTCGCCTTGTTGCAGCGGTGTGTTGATACTGCTCCGCAGATTCTTCCGATGCTTAAAAGACCTGTTGGCAGGTCATAAAAGCTAGCTTTGCATTTGCAGGATAAGCGATTACGAAAAAAATACAAATTTGGCAGCCGACCTAGCTAAATGAATCTATCCAGCGGAATATCCTCAACATTTCTTCGGCCGTCAATCACAGCTAACACCTATACTTTATTATCGTCCTATAAATGATTCGCCATGGATGGTAAATTAACACCCTATAGATTAAAATACCGTAATAACTCAACTCCGGAACAAGTCTTCCCTATAGGGGTATTAACTGCAAATTATCAGCTTTTGTTTAATGGCTGAATAATTTTTCTGGCTTGACTTTCACTATCATCAGCAGTGTAGTGTAAGCAATTATTTTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGGAACCGGCACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 1 105185-96837 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBQT01000010.1 Syntrophomonas wolfei subsp. methylbutyratica strain JCM 14075, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 105184 30 100.0 35 .............................. GATAAGACATACACAAGCGCAAGGACAACAGGCCG 105119 30 100.0 36 .............................. CTAATAAACTTTTTAAACCTGTTTAATATTGATTCT 105053 30 100.0 36 .............................. CCTGATGCAGTAAGATTGACTTTAAAATCGAATGGA 104987 30 100.0 37 .............................. TGGGATTATTGCAGATAATCGAATTGAACTTCCTGAA 104920 30 100.0 37 .............................. AGCAAAGAGATCCGGAACCCTTAAAACAGACGATAAA 104853 30 100.0 37 .............................. ATCGAACAGTCATGCCAGGACCTCAAGGGTGAAGAGA 104786 30 100.0 34 .............................. CGCATACAGTCAAGAATGGTATCCATACCATGCA 104722 30 100.0 37 .............................. CTTGATCAAGGTTGTTATATATGAAGAAGAGTTTGAA 104655 30 100.0 36 .............................. ATTGAAATGAATGGGCCAAATGGGGTAGAAAAGTTA 104589 30 100.0 37 .............................. ATAGTCTTCTCCACTGGAGGTCTCCTCCTTGGTGCCT 104522 30 100.0 35 .............................. TCGCCTCACGAAACTCACTGTGTTTGTTCTGCCAC 104457 30 100.0 37 .............................. ATCCCATGCGTGCTCGTTGCAATGTGCCTGCCACTCG 104390 30 100.0 39 .............................. AAATAAAATCAAGAAGAACAAAAAAGGAAATGGGACAAA 104321 30 100.0 35 .............................. AACTGTGCATCGTCCTCCATTTTTACGGTTGCGCT 104256 30 100.0 36 .............................. ATCCCCATCCTTTTAATTTTTTCCTTACGACCGCTA 104190 30 100.0 36 .............................. AAGATAGGTAAAGCGCAGGCTCCGGCCTCGCACTCG 104124 30 100.0 37 .............................. TAGTTCCCTCCCAACCGCCCCCACCTGAGTAGAGGCG 104057 30 100.0 36 .............................. TACATTTGCTTGCTTGATGTTGCAAGGAGATTCTCG 103991 30 100.0 35 .............................. GTTTAAAGGAGGAAAATAAAAATGGTTGAAAGTTA 103926 30 100.0 38 .............................. CCCTTATTCCCGCCCCGGTTCCAGCCCGGAGCAGGGTA 103858 30 100.0 36 .............................. TACTAGGGTCAGCAAATAAGAAAGGAATGAGATAGA 103792 30 100.0 35 .............................. GCCAGAGCTTAAGCCTCACAACGTCGCCCATGTCG 103727 30 100.0 35 .............................. GCCAGCTCCGCATCGATGGCGGCACGAACCCACGA 103662 30 100.0 36 .............................. GGCCTGGCTGGTGTAATTCCCGGTAAATGTAGCACT 103596 30 100.0 35 .............................. ACATATCCTAAAATCTGGTAATAGCGGGTTGTGAG 103531 30 100.0 36 .............................. TGGTGTACGTCGAGGGTTGTATCGTCTGCACCGCAA 103465 30 100.0 35 .............................. GCTTTTGGGTATCGCCGCCTATTTCGATTGTGATC 103400 30 100.0 38 .............................. AAGGAACAGGTTGCCTACTCTCCTGAATGCGAGGCCGC 103332 30 100.0 35 .............................. ACTTATACCTGAAGTTTATGGGGCAAATTGACAAA 103267 30 100.0 38 .............................. TACTATTTCCCAAATGTGCTATGCTATTGGTCATAAAC 103199 30 100.0 36 .............................. GCAGCCCAGTAATGATTGCCGCTGTCCACCCTACCC 103133 30 100.0 35 .............................. CGGGTAGCTACAATCATTTGCGATTAAGCCTGGCG 103068 30 100.0 37 .............................. CCCGGGTAGCTATAGCCTGCAGTCCTTCCTGCTCGAG 103001 30 100.0 36 .............................. TAGACTCTGGCATGGGTGCCCGGCCGCAGCCGTTAC 102935 30 100.0 38 .............................. TAGTGCTCTGTTAAAATGCGCTTACGTTCTTGGAAATC 102867 30 100.0 35 .............................. CGGCAAGTGCAAGTTGAACGGGAACGAATACAAGG 102802 30 100.0 35 .............................. TGCGCAGCAAAGCCGCTCTATAAATTACCAAGCGA 102737 30 100.0 37 .............................. ACATTTCAGCCCTGGGAGTATGGTGACCCATGGACAA 102670 30 100.0 35 .............................. TTCAGCCAGTCGGAAAAGACAGACCCATATGAGCG 102605 30 100.0 36 .............................. GTAAAGAAGTGAAGAAAGGACAGTATGAGGCCGTGA 102539 30 100.0 35 .............................. CGCACTCTTCGCAGTCGGTTTTCTCATGTATCATT 102474 30 100.0 37 .............................. TCAGTCCGATATCGTCCGGGCGGCTATGCGGCCTAAA 102407 30 100.0 35 .............................. CAACCAGGACGCTTGAAGAGAACAGGCTTGAAAAC 102342 30 100.0 36 .............................. CGGGTTTCCGGGGTTTTGGCATCGTCCCATCTCAAA 102276 30 100.0 37 .............................. ATCCAAGGCGGCCTTAGCGCCGCCCTTTGATTGCAAA 102209 30 100.0 36 .............................. TCGTCCCAGTCTACCTTTGCACCCAGGGCCTCAGCC 102143 30 100.0 35 .............................. TTTACTTTTGCATGTCTTTTTGTCGGGCATTTAAC 102078 30 100.0 36 .............................. TGACCAGCAAATGCCGGAGTTAAAGCAGGCGGCAGA 102012 30 100.0 35 .............................. TTTGGCTTAGTTTCGTATTTAGTTTGACCGCTTTG 101947 30 100.0 35 .............................. TGGACCAGGAAAACAATATACATGCTGTTTCGAAA 101882 30 100.0 37 .............................. TTGGAGAGGAGCTGTTCCATTCTGTGCAGGAGAGATT 101815 30 100.0 35 .............................. TGGACTTTGGTTTGCAAAGCCAAGCCTTTTTTGGT 101750 30 100.0 35 .............................. CGAAACATTATTTGTTGTTTACATAACTTAATAAG 101685 30 100.0 35 .............................. CCAGGTGTCGGATGCCGATGGGGATTCCGTGACTA 101620 30 100.0 35 .............................. TTCCCCGACCCCCATTTGTGTACACCAAATCAAAT 101555 30 100.0 37 .............................. CTAAAGGTTCGCTGGCCATTACCAGTTGATTGTTTTC 101488 30 100.0 36 .............................. TTCTTTTTGTCGATGAGGCCTGGATGCTGGCAGATG 101422 30 100.0 35 .............................. ATATTAAGGATAGACGGTATTTTTTTATGGATTCT 101357 30 100.0 35 .............................. GCCACTCTTTCTGATAGTAGCCCGCTATTACCCTG 101292 30 100.0 35 .............................. CGACCCACCCATTGTCGTAGTAACGAACGCTATTG 101227 30 100.0 35 .............................. GCCCCAGCCACATCCGAACCAGGAACCTCCTTGCA 101162 30 100.0 35 .............................. ATGGAGTAATTACAGTTTTTGTATGGAAGTATATG 101097 30 100.0 35 .............................. CTATATCGGCCGGCACGTTTACACTTCTGACATTC 101032 30 100.0 35 .............................. CTGATGAAGGGCTGCAGTGGTTTACCGATTTATGG 100967 30 100.0 37 .............................. AGTATCCGGCTAACGGGAACCCTGACGCACAGCATGA 100900 30 100.0 36 .............................. AAATCTGGTAACTGTAAGTAATACATGGTCTCCCCT 100834 30 100.0 37 .............................. AAGGAGGATGATAGGATGGCGAACACCGTCAATTATC 100767 30 100.0 36 .............................. CGAATAAGGAGGAATGCTAATTGCTACCACTACGCA 100701 30 100.0 34 .............................. TTAGGTTCTCCTGAGCCGCCTGGGTAAACCTGAA 100637 30 100.0 35 .............................. ATGCCAAGCTCTGCGGCCCGGTCCATCGGGATACC 100572 30 100.0 35 .............................. CCAACTCGCGTTTGGAAACTTTGGAGCAAGGCCAA 100507 30 100.0 36 .............................. GTAATATATACCGTTCTTTCCGGTGCCGACCATTCA 100441 30 100.0 38 .............................. TTTTTCAGAGTAAAGCCATAGCCGCAATGAAGCGGGGG 100373 30 100.0 36 .............................. TATGTGAGCATCTGCTGGAGCATACCCGGCAATATA 100307 30 100.0 37 .............................. TAATTTTACCCGCCGGGATTAAACGGAGTGAAGGACG 100240 30 96.7 34 ..........C................... ACCGCAGACAACCGTGAACAGGCTACAAGTCCGT 100176 30 100.0 36 .............................. AAGTTCGCCTCACGAAGTCCGGAACCGTCCGGGCCT 100110 30 100.0 36 .............................. TACCACAAGCTACCCTGTTCGCAAGTCCCCCGATAT 100044 30 100.0 36 .............................. ACTTACATGCTGTAGTTGTATTTGTTCCGAAATATC 99978 30 100.0 36 .............................. TGCGGCGCGCACCTCATACGCGAACCAGCCGCGGTC 99912 30 100.0 37 .............................. TAGAGACACCCTGGGGCACATTGTTTTCCCGCGAGGG 99845 30 100.0 37 .............................. TCAGTATTCCTCAGTAGAAACGGAAAAGCCCCAGCTC 99778 30 100.0 36 .............................. TTAGTTGGAACTCTTCTCCGCTTAGAGCAACGACAA 99712 30 100.0 36 .............................. TGGCTCTCGCTTTTAATAATACTTCGGGAGCAAAAG 99646 30 100.0 35 .............................. TTTGGCTTAGTTTCGTATTTAGTTTGACCGCTTTG 99581 30 100.0 35 .............................. TGGACCAGGAAAACAATATACATGCTGTTTCGAAA 99516 30 100.0 37 .............................. TTGGAGAGGAGCTGTTCCATTCTGTGCAGGAGAGATT 99449 30 100.0 35 .............................. TGGACTTTGGTTTGCAAAGCCAAGCCTTTTTTGGT 99384 30 100.0 36 .............................. TGGGAACGACCGCACAATCGGTTTTTCCAACTGCGA 99318 30 100.0 36 .............................. TTTGCAAGATATATCTGGCCATTCTGCGATTGCAGA 99252 30 100.0 35 .............................. TGGTGTAGGAGGTTTGTTGAATGGAAGAAAATAAG 99187 30 100.0 36 .............................. TTCGGATTGGGCACCTTCCAAACGGTGCCGACCCGG 99121 30 100.0 38 .............................. CTCAACTAACCACCTCCCCGGTTTCATTCGCCGGACGG 99053 30 100.0 38 .............................. ATCTTCCAACATTTTAACTCTGTATAAATGACCTGTTG 98985 30 100.0 34 .............................. TTACCTCCCTTCCCTATATATATGGCCGAATTTG 98921 30 100.0 35 .............................. TGATTTCCCGGTATCCATCAAAAGGATCAAAGGTT 98856 30 100.0 37 .............................. TTAAAGCGTTCAGTATCATCAAATGCCCGAACTGCGA 98789 30 100.0 36 .............................. TTTGCAAGATATATCTGGCCATTCTGCGATTGCAGA 98723 30 100.0 35 .............................. TGGTGTAGGAGGTTTGTTGAATGGAAGAAAATAAG 98658 30 100.0 36 .............................. TTCGGATTGGGCACCTTCCAAACGGTGCCGACCCGG 98592 30 100.0 36 .............................. GTGAAGAAGGTGAAGAATAATGTTTAAAGAGATATT 98526 30 100.0 37 .............................. TAAGAGTGAGAAGCATGACTAAGTGTTCGCTGTCATA 98459 30 100.0 36 .............................. CATATCAATTTTATTCGACTTCGTTGTGTTATCGTT 98393 30 100.0 37 .............................. CACAAAAGCAAGAAGGAATAGATATTAGGACATTTGA 98326 30 100.0 36 .............................. TCCTTTTCCCATCCTTCTAATTTTACAGCAACTACT 98260 30 100.0 37 .............................. CCGGGGAGGGGAAATCATGCAATGCATTGAGTGCGGA 98193 30 100.0 34 .............................. TATGCTGGGAAATCCCGCCGGCACTTCAGCCCAA 98129 30 100.0 38 .............................. AACTTTATATCCTCGGTAGTAACAGATAATCTTACCAG 98061 30 100.0 36 .............................. TCCCATCTCTACTTGCTGCTTTCTTGCTTCGCACTC 97995 30 100.0 35 .............................. AAGACTGGTAAATCGTATATGTGCTCCCTCGTGGG 97930 30 100.0 36 .............................. GCAGAGGACTTTCCGGCTGAAACAGATGCTTATAAA 97864 30 100.0 38 .............................. CCACCTAAAAAAGCTACAGCAACGAAAAAACTAACCAA 97796 30 100.0 38 .............................. ACACATCGGTCTTCCAGAAAACACCATTCAACTATCGC 97728 30 100.0 35 .............................. TATAAACACAATCATTCGTATCGCAATTGATTGTA 97663 30 100.0 36 .............................. GCGGCAGGGATGCTGACGGGGCTGAGTATAAAGGGC 97597 30 100.0 36 .............................. AGCTCAACTTCGGCAGTAAAATCGGATAAAAATTTC 97531 30 100.0 38 .............................. CCACCTAAAAAAGCTACAGCAACGAAAAAACTAACCAA 97463 30 100.0 38 .............................. ACACATCGGTCTTCCAGAAAACACCATTCAACTATCGC 97395 30 100.0 35 .............................. TATAAACACAATCATTCGTATCGCAATTGATTGTA 97330 30 100.0 36 .............................. GCGGCAGGGATGCTGACGGGGCTGAGTATAAAGGGC 97264 30 100.0 36 .............................. AGCTCAACTTCGGCAGTAAAATCGGATAAAAATTTC 97198 30 100.0 35 .............................. GCCGGCGCTCGGTTCTTTCCTCGAAATTCAATATC 97133 30 100.0 35 .............................. GGAGGCAGCTAACGGACCGGTACCGAAGGGGCACG 97068 30 100.0 39 .............................. CTTTTTTCCAGGAAGTCCCGCAGCGCGCTTGGAACGATG 96999 30 100.0 37 .............................. TGAATCCTGCAACTTCGTAACCAGCTCCGTAACGAGC 96932 30 100.0 36 .............................. TTCTCCTCTCCTTTACATTGGGTATAAATCGTCAGC 96866 30 96.7 0 ..........................C... | ========== ====== ====== ====== ============================== ======================================= ================== 127 30 99.9 36 GTTTTTAGCGTACCTATCAGGAATTGAAAC # Left flank : ATTGGAAAAGCATTTAATGGGAGAAAAGGGTTTTAAACCGTTTGTTTCTCGCTGGTAAGGGGGAGAAGTGATGTTTGTAATTCTTGTTTATGATGTTGGTGAAAAAAGAGTTACTAAAGTGTTAAAAACGGCGCGGAAACATCTATACTGGGTACAGAATTCAGTCTTGGAAGGGAATATTAGCGAAAGTAGCTTTAAGCAATTAAAGGTGGAATTAGAAAAGATTATTGATGAGGATTATGATTCGGTCATTTTTTATACTTTCCGAACCACAAAGTATTCTGATCGTGAGATAATGGGGGTTAAGAAAGGTGGGGAGGATAACTTCCTATGAGTTGAAAAAATGTCGTCGACCATCAGTAGCGTTAAAAAGCTTGGGTGGCGACGACATTATAAAATAAGGTCAACCTCCGAGATTTCCTCTTTTTAAAGATTTAGGTATAATATAAATAGGCACATGGCATTTTTGTGATTATGCCATTATTTCTTACCCCGGACGA # Right flank : CTAAAACTCAGGGCGTTCATTAGGCCGGATTGATTGATAAATGCTATTTGCTAATGGCCTTGCGTAATTTGACCCAGTACTGCTCGTCCTCAAATCCCATTCGCCATATGGCGACTCCCCGTAGGCTATATTTTTTAGCCAATGCCACTTTTCTGGTTATGCTAAACCCATTTTCAAACCAGACTTCATGTTTGAGCCCTCTATCCCAATAAAAGAAAAAAGCAGATTGGGAATCATTATCCCATTGGACTTTGGCTTTATGAGAATCAGCGCGTTGTTGCGCTTCCCGCTGGCCTATATATTTTATTTCGGCTGTTTTGGGAACCGGCCAATCATACCCGTAAGCTCCGATACAAACCACCAATTTATTGGCGGGGATTGATTTGAGGGCTTCTTTGATGTTTTTTTCCACCCATTTATAAGGGGAAACAGAACCTGGCTTAGTGTTTGCCGAGTGCTTGTCGTAGGTCATAATGGTTATTATATCGGCCAATCCCCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCGTACCTATCAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //