Array 1 165418-165865 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUJN01000002.1 Pectobacterium brasiliense strain Y65 Y65.scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 165418 28 96.4 32 .......T.................... TATAGCGGGAACCGCAGCGGCAGCGTCCAAGC 165478 28 100.0 32 ............................ ACAACGAGCGGCGCGGCATTGCTGGCACATAC 165538 28 100.0 32 ............................ TGGCAAAAGCGGCGGCAGAGCTGGATACGGTA 165598 28 100.0 32 ............................ AACGCGCCGCCCTGTGCATGGGTATATGCCGC 165658 28 100.0 32 ............................ TATTCCAGAAAGCCGATCGCCCAACGGAGAAA 165718 28 100.0 32 ............................ GCCAACACCTCACCCATGTTGCCGCACCATTT 165778 28 100.0 32 ............................ TCAATAAAGGCGGCGCGGCTGGCTATATCGCT 165838 28 85.7 0 ...........AGC........A..... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CCTGACGCTCTGTCATAAAGTCGGCGTCAGCGCGATCTTCTTGCAAAAACGAATGCCAATTGGGCTTAACAGGACGCAGCATGATGGTATCTCCCTCACGCACAATCTCCAGTTCGTTGACCCCTTCAAAGTCCATATCACGCGGCAAGCGAATGGCACGGTTGTTACCGTTTTTAAATACCGAAACAATACGCATGAGCACCTCCTCCTTAAAAATACAGAAATTCAGCCAGCGACTTACCGTTTATTATTGCTGGCTAAAACATAGGCTAAGTATAGATATTAATCACTCGGTTGTATATCCATAGCATATGCAGATACCTGACATAGGCCTATCGTCAATAAATAAAATCTTTGCCATACGTTCATGACCCTTTTTTTACGCATCGTCGTAACTCATTGATTTTAAGTTTATATTATCAGCTCTGATAAAAAAGGGTTTTTCGGGGGAAATGGTTTATTTCCTTTTAAAATTAGGCAACTACCGTAAAATATGAACG # Right flank : AATAAAGCTCTCCTAAAATCAGGAATAAAAAACTCATAGGCAACGCGGCCTAAAAAGCTGGTAGTCTGTTTGGCCGACTGCCTGATACTGTTTAGGAAACGCGATGTACCACATTGATGACTTCGATCTGAAAATCCTGACGCTGCTACAGACGAACGGCCGCCTGACCAATCAGGAACTGAGCGATCTGGTTGGGCTTTCCGCCTCGCAGTGTTCCCGCCGTCGCATCGCGCTAGAACAGGCACAGCTGATTCTTGGCTATCATGCCCGTCTGTCGCCGAACGCAGTCGGGCTGGAATGTCTGGGATTAATTGAGGTGCGACTGATCAATCACACCAGCGAATACGTTGAGCGTTTTCACCAGATGCTGGGGGAAGTGGATGCCATCATCGACGCCTATAAAACCACGGGCGATGCCGATTACCTGTTAAAAGTCGCCGTGGCAGATCTACCCGGACTCAGCACACTGATTAGCCAAATTCTGTCGCAGAACAAGAGCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 172933-171765 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUJN01000002.1 Pectobacterium brasiliense strain Y65 Y65.scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 172932 28 100.0 32 ............................ AGATCGCCGCCTGGTGAAGCCATAAGAACCTG 172872 28 100.0 32 ............................ GCGACACCGCTTCTCAGCTCCCGCTGAACAAA 172812 28 100.0 32 ............................ CCCGACACCTTCTACCAATGAGAACGCTGGTG 172752 28 100.0 32 ............................ TGCGCCTGAATTGCTGGTCTGTGATCTGGGCT 172692 28 100.0 32 ............................ AACTCCTGAAACAGTGCATCGTTCTGGCTCAT 172632 28 100.0 32 ............................ GCATTGGATAGCTGGCAAAAATCCCAGGTATC 172572 28 100.0 32 ............................ ACATAGCCCGCCTGCGTCGCCAGGCTGTAATC 172512 28 100.0 32 ............................ GAACACGTCCGCAGATTCATGGACCTTCGCGG 172452 28 100.0 32 ............................ AGAAACCCCCCCTGCGCCACCAAAAAGCACAC 172392 28 96.4 32 ...........C................ AGAGCGTTCGACAATTGAATCGTGATGTAATG 172332 28 96.4 32 ...........G................ TTGCTAAGTTGATTTCAGATTACATAAACCAC 172272 28 96.4 32 ...........C................ ACCGGACGCGCCGTATGCGGCTCCTGTTGTGA 172212 28 96.4 32 ...........G................ ATTTTAGCCTGTACGTTTGCGTATAGCTGGGT 172152 28 100.0 32 ............................ AGTGAAACATCATACTTATTTTGCTCAAGTCC 172092 28 100.0 32 ............................ ACGTATTTGATTTTGTGCGTCACCACGCTGCC 172032 28 100.0 32 ............................ GGTGGCAAACAGCCCCGCACCACCGATGGCCA 171972 28 100.0 32 ............................ AATACAACGCAAGTTGCATCAACTGCGTTCGT 171912 28 96.4 32 ........T................... ATAACGGGAATGTACTGGCCTTCAAAAAAGGC 171852 28 96.4 32 ...........G................ GGTATAACTGTGAGGGATGAGTGATATGGATA 171792 28 82.1 0 .............C......T...TCC. | ========== ====== ====== ====== ============================ ================================ ================== 20 28 98.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CTGCGTGACGGAGGTGCCGGTTCCCAACATCACCACGCTGGTATTGGCGATGGGAATATTCCAGTACAGAGACTGGTTTCCTTCCTCCGTGACATATTCGACACGGCCACCGTTAACGAGAATGCGGCAATGCTGGAGATAATAAACATTGGCGCGTTTGGAATGCAGAATGGTTTTTAAGTCCGAAGGGCTAAAAGCGTTATCCATAATGTATTTTCTGCCGCAATCGATAATAGCTGTGACGCCAGTGAAATAAATCTCAGGCTAATTATTTGATAAGAAAAATATAATCTTCAGAAAACTAACGAAAATCAGATTATCACAGTTGTATATGAAAAATTCTGACTGCAAAAATATTACCCAAACACAGACCCTTTTTATTTGGCCTATTTCACAGGCTTAACAATCAATGAGTTACAGATGAGCTGAAAAAAAGGGTTTTTGCAGGGAAAACGGAAATTGCTGCTAATAAAACAAACCGTTAGAGTGATCGGGCTACT # Right flank : CGCCTTAAGTGCCATTATCTGGCTATTATCGAGGTAACACTATCGGCAGGTTTTGATGCGTTATCGCCTTTAAATAACGTATTTTTGATTCCTCTTTCTCGTAACATTTTTAAGTAACGGGTTTCTTTATGGGGAATGAAAAATTGCGGATTGAACGTTATTAACATTTAAAAATCATCATTTTTCCGTTAAAGTGCCTTTACAGGGAAATAGTGCGTTGACTTAAGTAAAATTCAAAGGAATGAGATGCTGTGAAATACGATCCGGTTTTAAAAACGCTTGTGGATGATGACTATCGGCTAGAAGATCATCTTGATTTTAAAAAGCAGCATGCTGATATTAACTATCAGAAATTACATGCTCAACTCAATGAAATAAATAACGATAACATTCATGCCATATTGACTGCGCAGGAAGCGACGTATTTTTTACAGACGTTATGCACCCCGAATCCCAATCAATCGTGGAAAACGGCCATATTTGGCTGTACCGATCCCATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 181505-182251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUJN01000002.1 Pectobacterium brasiliense strain Y65 Y65.scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 181505 28 100.0 32 ............................ CGCAGGAGCTACATCAGCGATTATTACTGGTA 181565 28 100.0 32 ............................ GGTGACATCAACTCCCAAATAGGTGAAGTTGT 181625 28 100.0 32 ............................ AGACTGTCCGGAGCGGAATCAGCGGGGTTAAA 181685 28 96.4 32 ...........C................ GGAGGGATTAGCTAATGGGCTGGATTAAGTGC 181745 28 100.0 32 ............................ AGTTCGCACGCAGGGCATTCAATCCCCGCGAC 181805 28 100.0 32 ............................ CACAGCGTGCCAGTAATCCGATTTCGCACAAG 181865 28 96.4 32 ...........C................ GGCTGTTAACAGAACGTCTGATGCAGAGTGTC 181925 28 100.0 32 ............................ ATAAAGCAAAACCCCGCCAAATTGACGGGGTT 181985 28 92.9 32 .......A...C................ TGATTCAGCGCTGCTTTTTGCGGCGTGATGTT 182045 28 100.0 32 ............................ TCGCTATGCAACTAACTGCTGAGTAACTGGCA 182105 28 96.4 32 ............G............... ACGAACTACGCCCAGACCTTTACCCAAACCCG 182165 28 96.4 32 ...........C................ GGAGGGATTAGCTAATGGGCTGGATTAAGTGC 182225 27 89.3 0 .............C.........-..T. | ========== ====== ====== ====== ============================ ================================ ================== 13 28 97.5 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GGCGCTCTCTACGCTGGAGCAAACGGCCTGGCTGAAAGGATTGCGGGATTACACGCAGGTTTCTGAGTGTAAAGCCGTACCTGACGGCGTGAAATTTCGCACCGTACGCCGCGTTCAGCTCAAGAGCAGCGCAGAACGGCTACGTCGACGCTCGGTGAACAAAGGCTGGCTGACGGAGGCGGAAGCCGCAGCACGAATTCCTGATGCGGTGGAAAAACGCAGCGCCCTGCCGTTTGTGCAAATCAAGAGCTTGTCTAACGGGCAGATGTTCTTCGTGTTTGTAGAACATGGCCCGCTACAGGACGCCCCTATCGCAGGACGCTTTTCCTCCTACGGCCTAAGCGCAGAAGCCACCGTCCCTTGGTTCTGACCCTTTTTTGGCGACCATCTGCAAGTCATTGATTTTTAATTTCGGCTGGTCGCCCTAATAAAAAAGGGGTTTTCGAGATAAAATGAACATTCTCTTTAACAATCTGGTGGTTAGCGTAAAAACTTAACGG # Right flank : ACTATCGAAATGCGTCGCTGGCGCGACGCATTTTTGAGGGCTACTCCCCGTTGAGGGTAACCACCAGCGAGCGGCTGCCACCGTGGTTGCGGTGCTCGCACAGGTAGATGCCCTGCCAGGTGCCGATGTTCAGGCGTCCGTTGGTGATGGGAATCATTAGACTGTTGCCCAGCAGGCTACCTTTTAGGTGCGCCGGCATGTCGTCGCTACCTTCATAGGTATGGCGGTAATACGGCTCATCCTCCGGCACTAAGCGATTAAAAAAACTCTCGAAATCCTGCCGCACCGTGGGGTCGGCATTCTCGTTAATCGTTAGCGCCGCCGAGGTGTGTTTGATGAACACCTGCATCAGCCCGACATTTATCTGGCGCAGTCCAGTAACCTGCGCCAGTATTTCGTCAGTCACCAGATGGAAGCCTCTGGCTTTCGGCTTCAGGCGGATTTCATATTGTATCCACATCGCCGCCCCCTGCTATCAGGCTTCGCGTGCCAGAATCGGC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 150235-153195 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUJN01000005.1 Pectobacterium brasiliense strain Y65 Y65.scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 150235 29 100.0 32 ............................. CATTACCAGCTCGCGAGTGCCTCTGAGTTTTG 150296 29 100.0 32 ............................. GCCGGCTACCACGGTTACAAGGTGAAAGTACG 150357 29 100.0 32 ............................. CATCGTTTATCTGGGCTTTGGCCGGCAGTCCC 150418 29 100.0 32 ............................. ACTATCAGTTAACCCCGTCCTTGATTCGCCAG 150479 29 100.0 32 ............................. GTGGCTACGTGCGCTAGCCTGCGCTGCTGCGC 150540 29 100.0 32 ............................. TTTTCCCGCATGAAGCTGGTTGCCAATGGCAC 150601 29 100.0 32 ............................. CGAACCGGCGATTAACCGATCAGGGAAAACCT 150662 29 100.0 32 ............................. GTAATGTTTGTGGTGCAGGGATGCGCCATTTT 150723 29 100.0 32 ............................. CGCTGGAGGAGCTGCGTGAGCAAATTGAACGA 150784 29 100.0 32 ............................. AGGGGTTAGCAGATGTAGGTCGGCTGGTTGAT 150845 29 100.0 32 ............................. TGGAAATCCGCTGGAGAAATGACAGCATGACA 150906 29 100.0 32 ............................. GGGGAAAATATAATCAGCAACTCGCCCCTGAT 150967 29 100.0 32 ............................. TCACCAATCTTCCAGGGCGGGCTGGGGCTGGT 151028 29 100.0 32 ............................. GCATCAGCGGCCACAGAGGCCGCTTTTGGTCC 151089 29 100.0 32 ............................. TTCAAGCCCATTATCACGAAAGGTGCACAAAG 151150 29 100.0 32 ............................. TGATCATGTGCCAACCGCGCGTGGTGACATGC 151211 29 100.0 32 ............................. GATTTCCCCTTCTCTGGAACCCCCTCTATAAC 151272 29 100.0 32 ............................. TTCAGTCTCGGCCTGGGCGATACGCAAAAGCC 151333 29 100.0 32 ............................. GCTTGAGCTTGGCTCATTGCATTGGCCGCTTC 151394 29 100.0 33 ............................. GCAGCGAGTGGACGCCGCCTGATGCATCACTGC 151456 29 100.0 32 ............................. CCAGTCTATCGCGGCGTTGTACTACACAGAGG 151517 29 100.0 33 ............................. CACGTTCCGCATGCCCTCGCCACATCGACGTGA 151579 29 100.0 32 ............................. ATTGCGCACCGCGCCGCTAATGTCCGAAATAG 151640 29 100.0 32 ............................. TTAACTATGACTACGGTCTCAGTTACGAACAG 151701 29 96.6 32 .........................C... CGAAAGTTCGCGTGCGGATAGCACTTAGTGGA 151762 29 100.0 32 ............................. GCTATGTTTTGAATTGCCTGCTGGCCGCAGGT 151823 29 100.0 32 ............................. CCACGCTTTAGCGCAGCCTGAAATATGGTGAC 151884 29 100.0 32 ............................. CCCGCAGCGATTATCAGCGGGCTTATTAGCTC 151945 29 100.0 32 ............................. AACAGACTCCTGGTTCTGTCGGCTGTAATTAC 152006 29 100.0 32 ............................. ACGGCATCGGCGGCCTTATCAACCATCGCTCT 152067 29 100.0 32 ............................. TTTTCTCCGGCTGTTGTTAGCGCCTTTGCGAT 152128 29 100.0 33 ............................. TGGTTCAAATTCGCCGGTTTGCTGCTGCTGCGT 152190 29 100.0 32 ............................. CAACGTTCCGGACACTGACCGGGCAATACACA 152251 29 100.0 32 ............................. ACGAAACAACCGGTGAGATCGTGATGATGGAA 152312 29 100.0 32 ............................. ATGCCACAAAACATCCGTAATATGGTTAAACC 152373 29 96.6 32 ............T................ AGCGTTCCCGATACGCCACCGAATACGTCATT 152434 29 93.1 32 .A.........A................. CCCGACAGCAGGAGCAACACAAAGAAACCTAT 152495 29 100.0 32 ............................. AACGGCTCTTTTCTTGCGTCTTTCTTTTATAA 152556 29 96.6 32 .............G............... GAATCGGAACTCGATAGTTATTATCTGGGAAC 152617 29 100.0 33 ............................. GACTGCCAGTCTGACGATCCTCCGAGCCCAGCA 152679 29 96.6 32 ............T................ ATTCGATAGCCTGTCTGCTGCATCTGATTGAC 152740 29 100.0 32 ............................. TCGGCAACGATGTGCGCGATGTTATCGCAGGT 152801 29 96.6 32 ............T................ TGCGGCGTGATCTGGGGTTGTCTCCGTGGCCT 152862 29 96.6 33 ............................A GACAATTGCTTTGTAGGTTGCCCGACTGGCGGT 152924 29 86.2 33 ........T....A..T........G... ATTGATGATGAAGAGCAGCAAAAGGCGCTCAAT 152986 28 93.1 30 .A...-....................... GACAAACAAGTCGCACTCTGCGGCAATGCC 153044 29 93.1 32 ............T...T............ ACTGCATCAAAGAGTACAACGCCACCCTACCG G [153046] 153106 29 96.6 32 .........A................... CAAAGTTCATTCACTGATGGTTCATCTCCACC 153167 29 93.1 0 .............T.............T. | ========== ====== ====== ====== ============================= ================================= ================== 49 29 98.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAGGAAGTCTTGTCTGCGGGTGGCATTACGCCGCCGCTACCGCCGGACGATGCACAGCCGCCTGCAATTCCAGAGTCGAAACCGTTTGGTGACAGCGGCCACCGGGGGCAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTCCCGCCGCGGTTGCGCGGCAGGCTGGCGGTGTGGCTATTGGAAGTCCGCGCGGGAGTGTATGTCGGTGATACGTCACAGCGGGTGAGAGAGATGGTCTGGCAGCAGATTATCGAACTGGCAGAACAGGGCAACGTTGTGATGGCGTGGGCGACGAATACGGAATCCGGTTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGCCTGCGGTTAGTCTCTTTCTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTGTTATAAAACAACTCTCTACTTTTAGA # Right flank : GGGCTTATACCCCTTGTTGCATGTTGGTCTAAATATCCCCCGCACGGAACCAAATCCCGCTGCTGGCTGGCGCGATGGGGGATTGCGTGTCAGTATTAAAGCACGCCATTTTTGCACTCACCGTTACGGTGAGGCGCTATGCCAATGATTTTGTCTTCCATACGTTACCGTAAGGAGGTGATATGAAAGTTGAAGCCGCAGAGTCGTCCGTTTTTGCCAGCCAGCAGGTGATGGCGAAGCGTTCGACAGAGTATGCAGAGAAAGCGGCGCTGTCCGAACAGCTTCAGTCTTATCAAGCGGGCAGTGGTGCCGTTCCTGTGGGTCAGACGACGCGGTATGATTTCACCCGCATTAGCCCAGCCGATCTGTATGAAACAGTAGAAGGCCTTGTCAGCAGTGGGCGGTTGGGACGTGAAGAAGGTTCCGCGCTGCTGGGTTTTGTCTCGTCGCCGAGAGCCGAAGGGGGAAGTATTCCGCCTTCCAATGTGTTCCAGCCAATT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //