Array 1 105325-107419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBUQ010000008.1 Bifidobacterium animalis subsp. animalis IM386, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================================== ================== 105325 29 100.0 32 ............................. CTGTATCCACGGCGACCCGTCATACACGAATT 105386 29 100.0 32 ............................. TGCAAGGCCGAGTCCCTTGCCTACGCCGCTGC 105447 29 100.0 32 ............................. CGCTGCGGGAGGACAGTCAGGGTCGTCGATTG 105508 29 100.0 32 ............................. GTTGCCCATAGCGCCTTCGATGGTCTGCGTCG 105569 29 100.0 32 ............................. TTCAGTATCCATGCGTCGCCCTTGTGGTGGCG 105630 29 100.0 32 ............................. AGATATGGGTCGAGCGCACGAGGTCTGCGCAG 105691 29 100.0 34 ............................. GTTTCCGGCGCTAGCGCGGTATTAGCCGCTACAG 105754 29 100.0 32 ............................. GTGAGAGCGCAAGTCGGGTCAAGAAAACGTTG 105814 29 100.0 32 ............................. TAATACCCGTAATGGGAACTCGAATAGAAGAG 105874 28 96.6 77 .................-........... GCCGGGGCGAAGGTGAAGACCTGGCGTGAGGTGTGCGGCAACAAGGGTCCTGCCGGATTCGGCGAGGTCGCCAAGAA 105979 29 100.0 33 ............................. GGTATTCGCTACGAGCTAGAGGGCGCGAAGAGG 106041 28 93.1 32 T................-........... AGCGAGAATTGGCTGGACGTGCAAGCGCGTGC 106100 29 100.0 32 ............................. ACCGAGTGTTTCATCAACTCAGCCAACGGATA G [106124] 106162 28 96.6 32 .................-........... TTGAGCGTGGGTACTCAGGTATGCGATACATG 106221 29 100.0 32 ............................. GCAGCGTCAGACACGAATGCGCGCACTGTCAC 106281 28 96.6 33 .................-........... TCACGCATATTACCTTGCGTGGCCGGCTGGAAT 106342 29 100.0 32 ............................. CTCATGCCGTCCATCGCGTCCGCCATGCTCTC 106403 29 100.0 32 ............................. TAATCCATGACGCCGTTTTTATCGTTCTCCAA 106463 29 96.6 30 ...........................G. ACAAGCGTAAGGCAGCGAGGGCGGGAAGTC 106521 29 100.0 32 ............................. GCACGCTCGGTTGCCGGCGTGTAGTTGAGTTG 106582 28 96.6 32 .................-........... TCGGCATCACGCAACGCCTGCACCTGAGTCAA 106642 28 96.6 32 .................-........... GCGTCCGGCATGCTCACCGCGGACGGCAAACC 106701 29 100.0 32 ............................. GGTGGGCGACCAGCGCGAACGGTGCCGTCCAA 106762 29 100.0 32 ............................. AACCGAGCGTCCAACAGCACTCAAACCGATCG 106823 29 100.0 32 ............................. GCGGGCAGGTCCTTGAGCGCGACATCGCCGTA 106883 29 100.0 32 ............................. GCGGGCAGGTCCTTGAGCGCGACATCGCCGTA 106944 29 100.0 33 ............................. CCAACAGCAGCCCAAGGCACGCTCATCGAAAGG 107006 29 96.6 32 ............................A GGTTTTCGCGGCCGCATGTGATGTGCGAGCCG 107067 28 96.6 30 .................-........... TTGGGACGCCGTCGGCTGTGGGTCGTCGCT 107124 28 96.6 31 .................-........... GCGTCTTCGACGTGGCCACCGCCTTCATTAC 107183 29 100.0 33 ............................. TAATCGGAGGGTGCAATCGCACACTCAAACACG 107245 29 86.2 118 ..........T...A.A......A..... CAGATTCGTCTGATCCGCGCCCGATGAAAGAAAACCGAGGCCTTGGGAAGTCACCAACAGGTGTCTTCGCAAGGCCTCATCTCATAACACATTCTACCACACCTAATCACGGTGATTG 107392 28 79.3 0 .......T......A.T...-.C...T.. | ========== ====== ====== ====== ============================= ====================================================================================================================== ================== 33 29 97.8 36 GTTTGCCCCGCACAGGCGGGGATGATCCG # Left flank : TCTGATCGCGGGATTCGGGAACTACATTTGTGAGGCACCATGATAGTGATTGTGCTGACTTCCGCACCTCCGAAATTACGTGGACATCTCACTAGATGGCTGCTGGAAATCTCTGCGGGGGTGTATGTGGGCAAGGTCTCCGCTAGGGTGCGAGAACTCTTGTGGGTGCAGGTCCTTGAGAATCTGGAGGAAGGGAAAGCCGTGATGGTATATTCCTCGAATACTGAGCAGGGGCTTGAATTCAAGACTTATGGGCAGACATGGCAACCGATAGATTATGATGGATTGGAGCTTATCCTGCGGCCGGCCGAGCAATCTTCGGAGAATGATTCCGCCAGAAGACCTTCGCGCGGACGGTGCACGGGATGGAGCAATGCGTCGCGGTATCGACGATTCGGTCGATGATGGTGCGTCGAATAGCGACGACGGAAAGTGAGCGGAGTGTGCAAATCCAATCTTTTGACATAGTCGAGAGAGTGTTTTGCCAGTAAAGTCGGACT # Right flank : GGAGTGGTTCCGGCTAGCCTTAGCTGCCGGAACCACTTCGTCCAATCCTACCCCCCCATCACCCATTGGAGCTGAATATTATGAACAACAATGCAAGGATTTCGACCGCCATAGGAGTCGTCTCACTGACGTTCGGCATCACAGCACTATGTGGAGCGCTGAACGGAAATGCACTAATATCCGGGGGATTCGCAAGCGCCGCCGTCATCGCTGGTCTCGCTGCCGGCATCTGCGCATGGAGAGGTCGTGGCGACGACTGAACGGTATCTGCTGGTGGCCGAGGTGGTCGGTTTGCTCCGTATGACTGGGGAGAACCCGAAGCATCCTATTGGATGGCTTCTCCGCAGCGTTCTGGTGTTGTGTGATTCATTACCGGCGAGCAGAATATGGGGGTGGTACACTTTCTTGAAGATGCACCTGCTTTATGCTTTATATTGTTAGATATCCCTAACATTCCTTATCCGTTTTGAGCGGATACTCAATTTGAAAGCACGGTTTTC # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGCACAGGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTGCCCCGCACGCGCGGGGATGATCCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //