Array 1 194-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCWY01000075.1 Xanthomonas axonopodis strain Xa85 NODE_222_length_3265_cov_7.99684, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 193 31 100.0 38 ............................... CCCCGCCGGTCAACGCCGCGCCCAGCGCTGCCGACTTT 124 31 96.8 41 ..........................G.... CCGCCGCGCCCAATGCCGTGGACCTGATCACCGCCGATCTG 52 31 93.5 0 ..G..A......................... | ========== ====== ====== ====== =============================== ========================================= ================== 3 31 96.8 40 CTCGCCGAAATGGATGCCGACCCGGCCTTCG # Left flank : ATCCTGCCGACCCTGTTCGACCGCCGCACCCGCGCCGGCAACGAAACGCTCAAGGAAATGCAGACCACCTACGGCCCGGTGGTGTGGGAAGACGCCGTTCCGATGGACACCCGTATTTGCAATGCCGCCGCACTCACCGTTCCCGCCACCGGCGGCGACTATCAGGGCCGCGGCCTGTCCGCGTATCGCCGCGCGCTGGAATGGGTGCTGGCCGATGACGCGATGCGTATGGAGCAAGCCGCATGAGCAACCCCACCGCCAACGGTGAATTGGACGATTATCTGGAAGGCCTGCTGCACGATGCGGGCGTGGAGATCGTCGCCCCGCCTGCGGCCACCGCAGTAAGGGTCGAAACGCCGCCACTTGCGCATGCAGATCTCGCGCTGGCCGAGCCGCCGGTCGAGACTGCTGCAGTTCCCGAAGCCGCCACTGTCTCCGAGGCTGCCACTTCCAACGCGATTGCCGCGGTGCGCAGCGCCGATGCGATCGCCGCCGATTTC # Right flank : GGGCTGGAGGCCGCACCGATCG # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGCCGAAATGGATGCCGACCCGGCCTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //