Array 1 103578-106969 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGHO01000089.1 Acinetobacter baumannii strain ARLG1317 ARLG1317_NODE_3.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 103578 30 96.7 30 .............................A CCAAGTTATTTAAGATGGTTGGTCTTTTAG 103638 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 103698 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 103758 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 103818 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 103878 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 103938 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 103998 30 96.7 30 ............................A. AAGAAAGCATAATGGTATAGATCGTCTCCA 104058 30 93.3 30 ............................AG AAAGGTCAGGCGCGACGAGTCGCTGCCCGC 104118 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 104178 30 93.3 30 ............................AA TAAAAGATAGTGAACTAGTACACATAATTC 104238 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 104298 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 104358 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 104418 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 104478 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 104538 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 104598 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 104658 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 104718 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 104778 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 104838 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 104898 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 104958 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 105018 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 105078 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 105138 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 105198 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 105259 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 105319 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 105380 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 105440 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 105500 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 105560 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 105620 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 105680 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 105740 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 105800 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 105860 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 105920 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 105980 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 106040 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 106100 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 106160 30 93.3 30 ............................AA GAGAACGAACGAAAGTTCATGGACATGTTG 106220 30 96.7 30 .............................A AATGTGATTATTCAAGATAAGCTAGGCAGT 106280 30 90.0 30 .........A..................GA CCAATGGAGCACGATAACCCCATGGTTTAT 106340 30 96.7 30 .............................A AGTTAATTAAGGGTGTGGCTATGGTTGCAG 106400 30 93.3 29 ............................AA AATCACAAATACATAAATCATTTTTTATC 106459 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 106519 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 106579 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 106639 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 106700 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 106760 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 106820 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 106880 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 106940 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 94.9 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //