Array 1 778-2383 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOK01000391.1 Xanthomonas sp. SHU 308 393, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 778 31 100.0 34 ............................... CCATTCAGCAACCTCCAAAGTTCTAACGACTTCA 843 31 100.0 34 ............................... CAGTTCCCGATCCGGGACGACTACGAGCTGTACG 908 31 100.0 35 ............................... CATGCGTAGTCCGGCGATTCCTTGAAGCTGTCGAA 974 31 100.0 34 ............................... AGGACCGCGCTGACAGGATCACGCGCCAATTCCG 1039 31 100.0 34 ............................... GCCGGCACCGGCCCGTCCAGGGCGAAATTCAGGT 1104 31 100.0 34 ............................... TGACCACCACCGAGGAAAAGCAAAACGCAATTAC 1169 30 96.8 35 ......-........................ ATCTTCGTCTCGCAGTCTCCCGACCGCCAGTGCGT 1234 31 100.0 36 ............................... TACCGTTCCAGCGCGCCGATCATCGACGCCAACGGT 1301 31 100.0 36 ............................... TGCAAATCGATCCGGTGGGCGTATGGCGGGACGCGT 1368 31 100.0 35 ............................... CACCATCAACTAAGGATCTTCCATGCAGCACGAGC 1434 31 100.0 36 ............................... GCCATTGTCTTTGCCGCGCTGGCCGTGTGCATGTGG 1501 31 100.0 34 ............................... GCCACCTACCCGCGATGACCACCAAGAAGCCCAT 1566 31 100.0 35 ............................... CCGCTCAACAAGCCGGTGCTCGTCACCGACGTCCT 1632 31 100.0 34 ............................... CTGTGGAAGCTGCTGGGCCGCTCCGACTACGAGT 1697 31 100.0 34 ............................... GCGACCATGCCTTGGACTGCGCCGATCTACGACG 1762 31 96.8 34 ..............C................ TAACCACCCATCCCTGAGAGAGAGAGACAGCTAT 1827 31 100.0 35 ............................... TCCCAGGGCTTGTGGTCGTCTGGAGGTCAGACCGC 1893 31 100.0 33 ............................... TGACGTGCGAGATTTTGCGACGCGAGTTCAGTT 1957 31 100.0 36 ............................... TTCAACACAACCAACGGCCAGTACATGACCGTCAAT 2024 31 100.0 35 ............................... GTGATCGTCGCGATATTGGGGGCATTGTGGCTGGC 2090 31 100.0 35 ............................... ATCGTCAACCTCGCGGCGAACATCACCGGCATCAC 2156 31 100.0 36 ............................... TGGAGATACGCGCGCGCGACCGCGGAAATGTAGCAG 2223 31 93.5 35 ..........T.......T............ GACTGGCCGACGTGGTGCTACATGCCGATTGCCGT 2289 31 87.1 33 .C................TA.........C. CCCTTGCCAGCTGGGACTCGCTCACGCATGCCT 2353 31 67.7 0 ...C....A..CAA.....C...G.G...CA | ========== ====== ====== ====== =============================== ==================================== ================== 25 31 97.7 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : CGAAGATTGCGCCGAACTGCACACCGCAGCACCGGCGATCCTGCACCGCCGCGCGCCGACGCTGGTGGCGGCGTTCGCGCAACGCGGCTGGGCACTGCCGGAACGGATCGATCGCGTCTATTCGCCGCAACGGGCGCTGGACGCACTGGGCTGGCAACCGCGCCATGGTTTCGCGGAAGTGCTGCACCAATACGACACGCACGTGCCCGAGGTGCTGCCGCCCAACGACGGGCGCGCCGTCAGCGACTGAGCGCCTGGCGCTGATCGGCACACCGGGTTCGGATGGCGGAGCAAGGATGTGCGCCGTCGGCGCGAACCGGAAGCGCCCGGGGTTTTACCGGCCGGTTCGCGAATCCCGATAAGCACTTGATCGAAAAAGCGAAATGCCTGGGCACCATGAAACCGGGCAAGGCAGCCCCGCCCCCTGCACGTCGCCGCACGCCCGTTTCGCGAAATCGGCACTTTTTCCTTAGTCCCGGCCGGCAGTTATGCTGAGGGCT # Right flank : AGTGCAAGCCCTTGGTTGCGCGTAGGCGCGATTCACGACATCACCGCACCATGGACCTCAGCGCAGCAACACCGAAATGCCGAGGCCGCCCTGCCAGTCCGGGGTCTGCGACGACAGGCCGCGCAGCACCGACAGATCCAGTTGCACGCGGTTGGCGAACAGCCAGGTGACGCCGCTGCCGAGCGCGCGCATCTTGTCCTCGCCGCCGCCGATGCCCGCCTCGACGTAGGCGCTCAGCGTGTCGCCCGCATAGAAGGTGTAGCTCGGCGAGACGCTCCAGCCGGAGCCGTCCTCGCTGTCGCTGACATTGCCGTACAGCGCCAGGCTGCGCCCCTCCGGCAGGTCCCAGCCGGCGCTCACGCCCAGGTCGTAGCGGTGGCCGGCATCGCCGTACGGCGCGCGCCCGACCGGCAGGCTGGCGCTGCCGAGCAAGGCCCAGCTGACGCGGTCGCTGGCGCTGGGCAAGGCCTGCTTCAAGCCGATACTGGCGTCGCCACCAC # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //