Array 1 822-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_MYBA01000075.1 Salmonella enterica subsp. enterica serovar Muenchen strain BCW_2736 NODE_75_length_22921_cov_3.94771, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 821 29 100.0 32 ............................. TTGGCAGCGTTAACAATCCAACCCCTGAGAAC 760 29 100.0 32 ............................. GCAACACAGGGTTTAACCGGTTCCCTGGCGCT 699 29 100.0 32 ............................. GATGCTAACCACTATTTCATCCGCCTCGACGA 638 29 100.0 32 ............................. GTGCGCAGGATATTCTCGCGGACTGCGTAGCG 577 29 100.0 32 ............................. CCTGTGACCTGTTCGATGAAGTTGTCGCGCAG 516 29 100.0 32 ............................. CAGGCCGCGCAGTGGAAAATGAGCCCGTTTGC 455 29 100.0 32 ............................. ATTGATCCAATTAACGTAGCTGCAATGTTTGT 394 29 100.0 32 ............................. GCCGCGCATGACATCGAAAAAATGTGGGAAAA 333 29 100.0 32 ............................. GCGTCCGTGTGATCACCGGGTGGGTGATGAAC 272 29 100.0 32 ............................. TTCAGCGAGCCATAAAACCGCAGTTTGTTTGC 211 29 100.0 32 ............................. TCACTTCAATAAGTCCTGGCGGTAGCTCGGGG 150 29 100.0 32 ............................. CCCAGTCAGGGGCGCGATATTGCCGCCGTGTT 89 29 100.0 33 ............................. GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC 27 27 93.1 0 ...........................-- | ========== ====== ====== ====== ============================= ================================= ================== 14 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTACTCGCTGCCGGTGAAATTAAACCACCTCAGCCTGCGCCGGATATGCTGCCGCCAGCAATACCGGAACCTGAATCACTGGGTGATAGCGGCCATCGGGGGCATGGTTGATGAGTATGGTGGTTGTGGTCACGGAAAACGTACCGCCGCGCCTGCGGGGACGTCTTGCCGTCTGGTTACTTGAGGTTCGTGCAGGTGTTTATGTTGGCGATACCTCGAAGCGTATTCGGGAAATGATTTGGCAACAGATCACACAGCTTGGCGGAGTCGGAAACGTAGTAATGGCTTGGGCAACAAATACTGAGTCTGGTTTTGAGTTCCAGACCTGGGGTGAAAACAGACGTATTCCGGTAGATTTGGATGGACTTAGATTAGTTTCTTTTCTTCCTGTTGAAAATCAATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATTTTACCGTTGGTAGTTTGTTAGGTAGTAAAAAAGGGCTTTTAGAACAAATATATAGTTTTAGT # Right flank : C # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //