Array 1 2983-3195 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000233.1 Streptomyces sp. sk226 scaffold233.1.size10828, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2983 30 100.0 31 .............................. GCCGGCCGCCGCGAAGGTCACGGTCATTCGG 3044 30 96.7 31 .............................T ACATCGTCAGCGTTGAGTTCGTGGACGGCTC 3105 30 100.0 31 .............................. AGGCCAGGATCTCCCTCTCCGGAACCGGGGC 3166 30 83.3 0 .......................A.CAG.G | ========== ====== ====== ====== ============================== =============================== ================== 4 30 95.0 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : CTACGGGGCGCCCGCAGTTGAAGGCCGGGAGTGGTGGCGCGAGAGCCTGGAGACGCCGCCGGAACGGTCTCGGACCTTCTCCTACTCCGAGCTGGCCGTCCACCCCGAGAAGCGGAAGCAGGGGGTGGCGGACGCCCTCTCACGGGCTCTCCTGGCCGGGCGGCCCGAAGATCTCGCAGTCCTCCTGGTGGACGTCAAGCACCCCCGCGTGCAGTCCCTGTACGAGGGCTGGGGCTTCCGGAAGGTAGGAGAGCGTCGGCCCTTCCCGGACTCGCCGGTCTACGCCGTGATGCTGGCCGCCCTACCGCTTGACGAGAGGCACGGAAGGTAGAGCCGCACCTCTTCCATCGAAGCTGGGCCGATGAGACCGGATGGTGAGCAGAATGGCATCAGCGGAACCACACCTGCGACCACTTTGCCCCGGGGAGCGAGATATGCCGGTTTCTCAACAACTTAGTAAAAACCACCTCCCCGCCACCTAAACCCGCAGGTCACGAACA # Right flank : GCGAATGGTCGCGCGGACCGCACCGTAGCCCGGACAAGGAACAGCCCTACAGGTCACGACGTTTGGTCGTCGCCCTCAACGTCGCTTCCCCATGCGCGTTGGGCGTTGTGTCGGATGTGTGCGTGGTGGGCGTCGCGGAGGGGGTCGGTGATGTGGAAGCTGTGGTTGCCGGGGTGGTCCTCGTACAGTCCGCACCACTGCCGGTAGTTCTCGCGGAGGTGGTGGATGCGGTAGGGGCACAGGGCGAGGAGGACGAGCCGGTGGTGGACACGGTGGCCCCCTGTACTCGTCGCCCACAGGAACCACAGGCTCGCGGGCGGTTCCGTCTCCGCAGTCCACAGGCGCGCCGCGTGCTCGGTGGTCTCGTCGTGCTCGCCCAACTCGCACAGCACGTACGGCCTGTCGTCCAGGAGGTCTTCGGCGTCGTCGGGGCCGTCGTCCATGGCGAGCAGGGCGGGAAGTGCCTCGTCGTGCGGGAGGTTGGTGATGGCGGTGCATTG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 8409-8682 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000233.1 Streptomyces sp. sk226 scaffold233.1.size10828, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 8409 30 100.0 31 .............................. ACCCCTCCCGTCCCGGGTACCGGGCAGACCG 8470 30 100.0 31 .............................. GGAGGCGATCCAGGGCCTCCTCGCCGCAGGG 8531 30 96.7 31 .............................C TCGTCGGCGCATGGGGTGCGTCCCTCGGCAC 8592 30 100.0 31 .............................. ACCGGCTGATGAGGTACGCCGTGAACGGCGA 8653 30 76.7 0 ....CTG.......T....C......T..T | ========== ====== ====== ====== ============================== =============================== ================== 5 30 94.7 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CAAAATCCCACCCCACATCCCCGCCACGGCAGAAGTCGACCCGCCGGGCGCCAAGGAACCCGCCCACGAAACCCTCGTCGAGTGCACCAACTGCCGCCGCCCAGGCCCATCGGAAGCCCTTCCTGACGGCCTCTGCCGCCCCTGCCACCACGCCCACACCACGGGCGGCAACGACACCGGCGCACCCACCCCGGACGAGGTCGCCGCCGTCAAAGCCCACATCGCCAACCTCCGCAACCTCCTCAAGCCTGCCTAGCTCCCCGACCGCCGCACCCCTCGTCGGGCAGGCCGGGCTTACCGCACCTGCGGGGCCCACACCTGCGAAAGACAGAGCCGTACCTCTTGCACCGAAGCCGGGCCGCCCAGTCTGGCGGCGGGCAGAATGGCATCAGCCGAACCACACGCATGCCCCCTTTTGCGAAGGAAGGCGAGATATGCCGGTTTCTCAACAACATAGCAAAAACCGCCTTCCCACCACCTAAACCCCCAGGTCACGAAGA # Right flank : TTGTCCCCAAATCGAGGAGCCTGCGGACCGACCAACGCAGTTGGGGCAGTGAGTGCGGTCGCCCTACCTGCTTCGATGAGGAAATCTACGCGCCCCGCAACGAAGTTGAGCTGACGGTCAACGCCCTCAATAGGCTCCGTTCGGTGGCCACGCGATACGACTAGCGCGCCCACGTCTTCCAAGGAACCTCGCCCGCCGCAACGATCTGGTTCGGGCTTCGGGGGTAGATCCATTATCGCGCTCCGCGAAGGCGCTTGTCACCGTTCTCCGGAATGATCTTTACGCCCGTTATGCACTCGTAGGGTTACGGGGATCGAGCACGACATACCAACCTGATGTGGAGTCGAGAGTGGTACTTGACGTTGCCGCACTGGCGAAGGAACTCACCGCCATGGCTGCGGCCGACCAACAGTCCTCATCCCAGGCCAACAGCGATGATCCTGCTGAGCAGTTGGCATGGCGTCGGCTCACCGCGCAGCACGGCGACCGGCTCGGTCAGA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5753-5111 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000066.1 Streptomyces sp. sk226 scaffold66.1.size35001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 5752 30 96.7 31 .............................A GGTTCTTGCTGTCCCAGAACATCGACACGTC 5691 30 96.7 31 .............................A AGCACGACCTCTACCGCACGATGATGGCGCT 5630 30 96.7 31 .............................T CGTCGTCCGTCGTATAAAACATCAGCTCATC 5569 30 100.0 31 .............................. CTGCCGTTCCACCGCAGCCACTGCCCCATGG 5508 30 96.7 31 .............................C TCAAGGACCATGAAGACAGCGACATGTCCGT 5447 30 96.7 31 .............................C AGTCGTTCTCGAAGAGGTCATGGATCCGCTG 5386 30 96.7 31 .............................T GGCCCCTGGAGGTCATCGAGGAGGTGGAGGA 5325 30 100.0 32 .............................. TATCCAGGGTGGCGTGACACTTCTTCGCGGCG 5263 30 100.0 31 .............................. CCGTACGCGCCTTCCAGCGCGCACAGGGGTG 5202 30 90.0 31 ............AT...........C.... GCGGCAGTGATCGGCGTACCTGTACGACGCT 5141 30 76.7 0 .C.........C.GG......C....TT.. | T [5123] ========== ====== ====== ====== ============================== ================================ ================== 11 30 95.2 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : GCGTCGGGCGCGGGTTGAGCTTCGGCCGTGGCGCCGGGAGGACTTCGTCGCCGACCTGGACGATCACTTGATGGACGCCCTCGGGGCCTGACGACGGGCATCGCTCACTGCTTCCTGGCCACTCCATGGCAGGGAATGACGAGTTCCTTGAGCCGCCGAACCTCCGGCCAGGAGTCGCGTGCACGCGGGCTTTTGGGGCGAGGGCCGAGCTGGTCGGCTCAAGGCACCGGTAGTGGTCGTCGTGGTCGAAGACCTCACCGACGTCGGCCACGAACGTGTTCGCACAGCGAGCCCAGAACACAACGCCCCTGGCCGACACCTGCGGAAGGCCGAGCCGCTTCTCTTCCACCGAAGCCGGGCCGACGAGGTCGACGGCGGGCAGAATGGCATCAGCCAAGCCACGCGCATGAACTCTTTGCGACAGAAGGTTGGATATGCCGGTTTCTCAAGAAGTGAGTAAAAACCGCCACCCCGCTACCTAAACCCCCAGGTCACAAAGG # Right flank : CGGGTGTTCGCGGTGCCTCTTCGCCCGCCCCGCGTTCCGTAGCCGCCCATAGGCACGCGGCGCGACACCAGGCACCGCCCGCCCCGCCCCGCCCCGCTCCACCATCCCGGCCGCCTCCGGAGCGCCCCCGCGACCGCTCAGCCCAGCCCCTCCTCCACCAAGGTCGCCCACTGCGCCACCACCCGGGCCCGGCGGGCCGTGTCGTCGGTGAGGAGGTTGGCGAGGCCCAGGCCGCGGGCCATGTCCAGGAGGCCCTGGACCGTTTCGCGGGCGCCGGGGCGGGACTCGTCCGCGCCCAGGAGTTCGACCGCGATGCGGTGGGTCTCGCGGCCCACCCGCGCTTCCAGTTCCGTGACGCGCGGGCGGAGCTGGGGCTCGTTGGAGGCGGCCACCCAGAGGTGGAGTGCGGCCCGGAAGAGGGGGCCGGTGTAGAGGTCGACCAGGGCCGCGACCACCTCCGCGCGGCCCTGGACGGGCAGCGCGCGCAGGGCCGCCGAGCG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 10039-9026 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000066.1 Streptomyces sp. sk226 scaffold66.1.size35001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 10038 30 96.7 31 .............................C ACCTCGACCACGACGGAGGACCCCGCATGAG 9977 30 100.0 31 .............................. TCAGAACGGAGCACCGGTCACCGCGGATTCG 9916 30 96.7 40 .............................C GATCGCGTAGGAACTCGTCCCACGGAACGAACGGAACGTC 9846 30 96.7 31 .............................A GGCTGGTCACGGACGAAACGAACGGAGACAT 9785 30 100.0 31 .............................. TGCAGTCGCGGCTGACGGGGCTCGCCGGGCG 9724 30 100.0 31 .............................. CGTTGGGCCGCCGGTCGATCGGGGGCCTTCC 9663 30 96.7 31 .............................T GCTCGATCCGGCGGACGGCCGGGATCATCTC 9602 30 100.0 31 .............................. GGGGGCCGCTAGCCGCCAGTTCGGTCACGAA 9541 30 100.0 31 .............................. CGACCGACTGGGCCATCACCACGGCGGTACG 9480 30 96.7 31 .............................T GGCCCTGTTCGGCATCGACTCACCCGCCGCC 9419 30 100.0 31 .............................. TCTCGGACCTCGACGGTGACGCCGTCAGCGT 9358 30 96.7 31 .............................C CGACCGATGCCCTGCTCAGGCCCCCCGGATC 9297 30 96.7 31 .............................A TCTGGTCCGTGCGTCCGGCCACGACCGCCAG 9236 30 96.7 31 .............................C GTACAAGTGTCTCGTCAAGGCCGTCCTCGCG 9175 29 93.3 31 .....................-.......T CGGAGACCGTTCCCGAAGTCCGTTCCGTGCA 9115 30 93.3 31 .........................A...T CGGGAGTCACCGCGATCACATACGCCGGGTA 9054 29 90.0 0 .C.......................-...A | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 97.1 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CACCGACAAAATCCCACCCCACATCCCCGGAGAGGCAGAAGCCCGATCGCCGGACGCCAAGGAACCGGCCCACGAAGCGCTACTGGTCGAATGCACCAACTGCCGCCGCCCAGGCCCGCCTCAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCACCACGCACACACCACCGGCAGCGACCCCACCACCCCCACCCCGGACGAGGTCGCCGCCGTCAAAGCCCACATCGCCAACCTCCGCCACCTCCTCAAACCCGTCTGACCCTCGCCAGAAGACGGCCCTTGGGCAGGGCAGGCACACCGCCCCCCGGGACCGACCCCACGGAAGGCAGAGCCACACACCTTCCACCGAAGCGGGGACGATGAGAGCAGTAGTGGGCAGAATGACATCAGCCGAACCACACCCATGACCACTATGCCAGGGAAGGCTAGATATGTCGGTTTCTCAACAACATAGTAAAAACCGCCTCCCCGCCACCTAAACCCCCAGGTCACAAAGG # Right flank : CGCACCATCGCTTGCGTGAGATCACGGCCTCGAAGCCTGGAAGGGCGGAACCTACGGCCCCTGCTCCGGCGGGGTCCGTGACCATCCGAGCTCCTGCCCGCCGGCCCCGATCCGGCGCTCCGGAAGGCCGTAGATCCCGAAAGGCGGGAACAGGTCGACGCGGCGCGGATAGTCGCCCTCCGCGCAGTCCCGACACAACAGATCCCGGCCCCGATCGGTGTGCCGCACGGCAGTCACCGGAGCGCGCCAACACGCTTCGCACGTGCGGACATCCGTGGTCGGCAGATCAGGGCTCATCCGGAACCCTCAAGCGCAGTGGCCCCCTCATGACACGGACAAGCGCACGCTGGCAGACGGCACAGGGTGTGCACACCGGCCAGGTCTGTCACCAACGCGCTGCGGCACACCACGCTGCACGGACCGTCCGCACCGGCCGACAACGCGTCCAGCGCTACAACCGGCTCCCCGGCCTCGTCGGCCCCGGTGATCGGATCACCTCG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 14825-14433 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000066.1 Streptomyces sp. sk226 scaffold66.1.size35001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14824 29 100.0 32 ............................. GGAGCCGCTGTGGCCCGAGGGCGTCGAGGAGA 14763 29 100.0 32 ............................. ACGCCAGCCCCGGTCAGGCCCGTTAGTTCCAA 14702 29 100.0 31 ............................. TCGCTCGCGCTGGGAGGACTGGGAAGCGGCA 14642 29 100.0 32 ............................. CAGTGGTACTTGTACCAGCCGGTGCCGGGCTG 14581 29 100.0 32 ............................. ACGGGGTGGCGGATGCGGCCGGTGTTGATGGT 14520 29 100.0 32 ............................. GCCTCCGCCCGGCGGATCCTGCTCCAGGACGG 14459 27 86.2 0 ....-....-...........T...C... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.0 32 GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GAGCGCGGGCATGCGTGATGGCTCCTGTGGCGGACACGGGGACGGCCGACGACCGGGGAGGGGAGAGCCCTGCGCGAGCGAGCGCTGGGCGATGGCCGCGCGATGACCGCGGGTCCCCCGGCTGCCGGGTGGCCGAAGTTGACGCGTCGAAGTCTCGCCGCGCACCACCCACGGGGTCGTCCCCCCAGCAGCCGAACCATGCCCTGCCCGAAAGTGCCACACCCGGCCGACCGACACCCCTCGGAAGTGCTACCGCCGGGCATCCTTCTTCTGACCGATCCTGGCGACCCGGGGGCGACGGGCTGCCGCCAACAGTCCGGGGTACGACCGAAGTACGGGACAGGGCGCCGGGCGAACTGGCAGGCTGAGAGACGGATCCCGGGGGGTGCTGACCTCCGCCCACCTGGCAACCCATTCAAAACTTAAGGCCACATATGCCCGACTCTCAAGAAGTTCCCCAAAACGACCTCTCGGCCGGATAAACCCGCAGGCCACGAAGG # Right flank : CTCCACACCCCCACCCCGCTCCACCCAGCCGGGTGCCCCTCCCCCCCATCGCGATGCGTACACCCACGGCCCCCGTCCACCCGACAACACCGCAGGTCGCGTGTCCTATGGTCTCCGTTCATGAGCCGAACCACGCCGCCTCGCCCGGTGAACATCGAGGCGCTCTTCCCGAAGCTGGGCGCGTTCCGCGGTACGACGACGCGGCTGCACCCGCAGCCCGGCCGTCCGGACGCGGCGGCCAGTTCGGTCGGCGGCCCCATGCTGTGGCCGGCCGACGAACCGTGGCCGGTCTGCACCGAGCCGCACAAGCGCAGCAGCGGGTACCGCATCGCGGACGTACGACGCGAGCGCCAGGTGCTCGCAGACGCCTGGGCGCGGGACCGCCCCACCGATGAGGAGCGGGATCTGCTCAAGGAGCTGGGCCGCAGGCACCGGCAACGCGAGATCGCCGACACCGGTCCGATCCCGCTGGTCGGCCTGGCCCAGTTGTACCGGCGGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9439-9956 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000088.1 Streptomyces sp. sk226 scaffold88.1.size28915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 9439 30 96.7 31 .............................A ACGGCGAGAACACCGTGGAGCAGGAGGGGGC 9500 30 100.0 32 .............................. ACCTGGTCGAGCTGGACGACATCTGGCAGCAG 9562 30 96.7 31 .............................A ACATCCGGGCCATCTGGGAGACCGACCCCGA 9623 30 96.7 31 .............................C TCCAGGGCTCGGACCCGTGGACGGACGCGCA 9684 30 93.3 31 ...............A.............T GCTTGAAGTAGGTGACGTGCGGTTTGACGTC 9745 30 100.0 31 .............................. TCACCGCCACCCGCACCGCTGTTGTCCGCAG 9806 30 93.3 31 ............TG................ TGGTGAGTCCGGCGATCGGGAGCCAGGTTTC 9867 30 90.0 31 ............TG...............C ATGGCGGGAACGCGAACCGCAGGGCGAGCGG 9928 29 80.0 0 .........T.T...A.-.......C...T | ========== ====== ====== ====== ============================== ================================ ================== 9 30 94.1 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACCGACAAAATCCCACCCCACATCCCCGGAACGGCAGAAGCCCGATCACCGGACGCCAAGCAGCCGACCCACGAAGCGCTACTGGTCGAATGCACCAACTGCCGCCGCCCAGGCCCGCCTCAAGCCCTCCCCGACGGCCTCTGGCGCCCCTGCCACCACGCACACACCACCGGCGGCGAGTCCACCGCCCCCACCCCGGACGAAGTCGCCGCCGTCAAAGCCCACATCGCCAACCTCCGCCACCTCCTCAAACCCGTCTGACCCTCGCCAGAAGACGGCCCTTGGGGCAGGGCAGGCACACCACACCCCGGGAACAACCCCACGGAAGGCAGAGCCACACACCTTCCACCGAAGCGGGGACGATGAGAGCAGCAGTGGGCAGAATGACATCAGCCGAACCACACACATGGCCACTATGCCAGGGAAGGCCAGATATGTCGGTTTCTCAACAACATAGTAAAAACCGCCTCCCCGCCACCTAAACCCCCAGGTCACAAAGG # Right flank : TGTGCCCCCGAGTGAAGTGGCAGGTCACACCCCGCGCGGGTACTCCCCCTTTCCCGTCCCGATGATCCCGCCCGGGTCCCGCAACCACACCTGCTGACCCCGGCCAGTCACCGTCAACCCGAACTCCTCCGCACCGGGGTGACCGGCCGACTCGTACTCCCACCAGGTCTGCTCGATCTCTTCCCACAGCAGCCCGACCCCGTACTGCCACACCTCCTCTCCCGAAGCCGTCGAAGCGCCACCGACCTCACTCGTCACCCACACACGCACCCCGCCACCGGCGACACTCTGGTGAATCATCCGCACACCGGGCAGTCGCGCCCCCGCGAACAACGCGAACCCGAGGTCCAGCAACCGGGCCGGGTCCAGACCGGCCGCCCGCGCTCGCCCCCTCCCCCGTACCTCGTGCAGATCGGGTACGCGGTGCGAGCGCATCGGCATGTACGTGGCCCCGCCGCAGAACGGCCCGACTGCGCTGCCGTCCTCCTGAACCCGTAGCC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : GTGGTCCCCGCGTGCGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13962-14113 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGV01000088.1 Streptomyces sp. sk226 scaffold88.1.size28915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 13962 30 96.7 31 .............................G CCACCTTCGACATGCTGGTCCTGGATCGGCA 14023 30 100.0 31 .............................. ACGACGGCGACAACTCCGGCGCGATGTTCTT 14084 30 93.3 0 ............................GT | ========== ====== ====== ====== ============================== =============================== ================== 3 30 96.7 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : CACTCGCCTTCACATCACGGAGTTGGGCAAGCTGGGCGGGGTCGGTCACTCGCTCGCCCTGAACGAGTACGTCGGTGGTGCCTTCGACCTCGTAGAGGGTGGGGCAATCTCCGTCGTCACTGGTGGTACCGAGAAACCTGAGAACCGTCATGGCGCCCTCCATGAGCACTGAGTGGAAGCCCAGGATGCGATGGATGGTGAGGGGATGCCGCCAGGTTGCGCGGAATTGCAGATCGCGGACGTAGCAGGGACGTTGCGCGCAACTGGCAGAGGCAGCACTAGCCAGCGTACGCAGAGCCGCACCACGCACCCGCCAAGCCACGGCAGATGGCGCACCGGCTCTCGCCCCGCCACCAGACCGGCCGAACCAGCAACAGGCACAATGGCACCAGCCGCACTGCACTCGCGTGACCGCTGAACACAAAAGGCGAGGAATGCCGGTTTACCGAGAAGTGAGTAAAAGCCGCCGTCCTACCACCTAAACCCCCAGGTCACGGAGG # Right flank : TACCCCGAGTGAGGAAATCGGTGTGACCGGTCCGCCGCCCTGGATGTCAGTGCCGACTGCTTACATGAGCCCATGGACACCGCGCACACGACCGCCGCTCTCCTCCCGGACCCCGCTAAGCTGCGTGCACACCTGCGCGCGCTTGCCGTGCTGGACCAGGCGATCTGCCGCGACCCTCGGTTCTCCCGCTTCTCCTTCTCCACCACCTGGGGGCCTGAGACGGAAGCCGCCCTGATGGACAACGGCTCGGGTGACGACTACTCCGTCCTCTTCACCCCGGCCGGTGTGCTCGTCCGCGGCTTCGACCACGAGTCGGAGATGAGCCCGTACGCCACGGACGACGAACAGGTCTGGCCCGGCGTCATCGACGAGCTACCCGCCGCGCTGCGCCCGCTCCTGGACGACCCGGCCTTCGTCGACGAGGGCCTCGGCGCCCCGCGGGTCACCGCCTGTCTGTGGTGGGAGGCCGGCAGCAGCGGCTGGCGCACCGGCTCCGGCAT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //