Array 1 2469521-2474411 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM003594.1 Psychrobacter sp. P11F6 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2469521 28 100.0 32 ............................ TGCTTAGAATTAACCAGCGATCTTGATTCAGT 2469581 28 100.0 32 ............................ AATCCGAACCATTGCGCGTCCAATACGCTCCA 2469641 28 100.0 32 ............................ CATTTCTTATCACTAGATTGCCCTGACGCTTT 2469701 28 100.0 32 ............................ TGAGCCAGATCCTATCTATGCTCCTAAGCCTA 2469761 28 100.0 32 ............................ TTGATTATTCGCACTTAGTTAGTGCAGTTGAC 2469821 28 100.0 32 ............................ GCCCTGTCATGGTGTTAGCGCACTATGTCGGG 2469881 28 100.0 31 ............................ TAGCGATATGCCCGGTCGCCCCGGTGCTGTC 2469940 28 100.0 32 ............................ CATCGCGGTAAGGGTTATTGCGAGTGGTGCCA 2470000 28 100.0 32 ............................ TTTAACTGTTGAATGCCGTGAAAGTCTCATGA 2470060 28 100.0 32 ............................ GTTTAACAGACGGTCGAATTATTAATCATTGA 2470120 28 100.0 33 ............................ TTTGATTAACTTATCGGTACTCATAATAATATC 2470181 28 100.0 32 ............................ TTGCTACTTTAAATAGCGGTGAAAGTGGTCTT 2470241 28 100.0 32 ............................ CGAACAAATCGGATTAGCCTCACTGATTTCAA 2470301 28 100.0 32 ............................ CACGACCCTCGGCTTCGGAGGTCGCGGTCATG 2470361 28 100.0 32 ............................ TAGACGAAGCGATACACGACAAGGCAGCCTAC 2470421 28 100.0 32 ............................ AGCTTACGGTTGCATTGGCGTTATGTCACGCA 2470481 28 100.0 32 ............................ GTGGTGATTAGCGGTGATGCGGTATCGGAAGA 2470541 28 100.0 32 ............................ AACTATTTCAAGGCTGGTCGGCTCTGTGTCCT 2470601 28 100.0 32 ............................ CAAAGCGGATGATGCAGCCGACGCTTGATAGC 2470661 28 100.0 32 ............................ ATGTTTCCCGTCTACATCCAGTACGTGATGGT 2470721 28 100.0 32 ............................ TGTCTCAGTTATATGTATGATTTTAGATTGGT 2470781 28 100.0 32 ............................ AACCGAGCCTGATGACATTGTTGCTTTAAATG 2470841 28 100.0 32 ............................ AACATCATCCGCCACTGGCTTAATCCAATTTA 2470901 28 100.0 32 ............................ AATCAGCAGATAGTCCAGTTGATACGAGGCAC 2470961 28 100.0 32 ............................ TTCGCTGTCTCGACAGCAAGTGCTGCGATAGC 2471021 28 100.0 32 ............................ ATAGCTTTAGCAACAGCCTGCTGAATAGCCAT 2471081 28 100.0 33 ............................ CGCAAGCCCGTTTGTATGAAGGCGCAATTTGCG 2471142 28 100.0 32 ............................ GTAATCAACACACGTGACGCTTGCAGTAAGTC 2471202 28 100.0 32 ............................ AGCCAATGCAGTAGCAATCACCTCATCAACAA 2471262 28 100.0 32 ............................ AATGACTGGCTATCCATACTTTACGATACCGA 2471322 28 100.0 32 ............................ ACTTTCAATGTCTCGTCACCAGCTCTCAGCTC 2471382 28 100.0 32 ............................ AAATACTTACACTGCATTTGTGTTTAGCGGAA 2471442 28 100.0 32 ............................ TCCATGATAAATTGCTTAACATGATTAGCCTC 2471502 28 100.0 32 ............................ ACCTTCCCAGATCTTAACGCCTGCTGTGTAAT 2471562 28 100.0 32 ............................ AGTACCGTTAGACCCACTCATGCCAGCACAAG 2471622 28 100.0 33 ............................ ATTATTCATCCCCCCCCTATCTCTACACGCTCT 2471683 28 100.0 32 ............................ TGATCAACACGGTATGAAGTCACAACAAAACC 2471743 28 100.0 32 ............................ TTTCAGGTTAGTCATAGCTTCAACACTTTTGT 2471803 28 100.0 32 ............................ GCCATAATGCCGAGAAAGATAAACGAAAGTGT 2471863 28 100.0 32 ............................ TGTACCTGCTGATGCTATGGCTGAACCTATAA 2471923 28 100.0 32 ............................ ACTGTAAAGCGGTTCTTAGCCCATTCATTGTA 2471983 28 100.0 32 ............................ ACTGACCACGTTCAACATCCTCAATGTAGTAG 2472043 28 100.0 32 ............................ CTAATGACGCGACTCAGCAAAATAAGTTTGAG 2472103 28 100.0 32 ............................ TCCCACTGCTCAGGTGTTTTCTGTTCCTGCTG 2472163 28 100.0 32 ............................ TACTGAAGTAGATGCAATAACTCAAAATCTGC 2472223 28 100.0 32 ............................ CGTAACAATATCGTCAGGCATTGTAAGAAACA 2472283 28 100.0 32 ............................ AATCAAAACCGATATTGTCCAGCTCACCAAAA 2472343 28 100.0 32 ............................ AAAAGATGATACGTCTTTACCGTACTTGTCCT 2472403 28 100.0 32 ............................ TAATAGATTGATTATTTCCTTATAAGTGTGAC 2472463 28 100.0 32 ............................ AACAACGCATTCGCTTTGAGCCTATCTTTGAG 2472523 28 100.0 32 ............................ GTAACCCGTCATCGTACCACCAACACCAGCGG 2472583 28 100.0 32 ............................ AACTGTGGTCGCAGCGACGACTTACGAGCTAA 2472643 28 100.0 33 ............................ ACCAAGTTATCCAGCCCAACAAGAACCCTCAAC 2472704 28 100.0 32 ............................ TGTCATGAGCCAACCTGTCAAGTCATCCTCAT 2472764 28 100.0 32 ............................ TTAAGCATGATTGCACCAATGCCACCACTAAT 2472824 28 100.0 32 ............................ GTAGTAAGGCGCTACTGGCAGATAATCACCTG 2472884 28 100.0 32 ............................ ATTAGAGTGAACAGTGGTTATGCCCCCTGGAT 2472944 28 100.0 32 ............................ TCATACATAAAAGCGATGATGAGAGATATAAC 2473004 28 100.0 32 ............................ AACCAAAGAAGGCATGGGGCAGGGTGATTTAG 2473064 28 100.0 32 ............................ GTAGTCAGATTGTGAGTTTCCTAATACTGTCA 2473124 28 100.0 32 ............................ ACAACACCGCTTATAGATACTTTGCTAGTATG 2473184 28 100.0 32 ............................ ACTCACGTAGCTCATCGATGCCCATTTCAGCA 2473244 28 100.0 32 ............................ TTGTATTACGCCAGCCCCTGCAAAATTAGCCC 2473304 28 100.0 32 ............................ TTATTTTAAAAGCAGCTCAAAGGATCACAAAT 2473364 28 100.0 32 ............................ ATCCAGCCAGTCGTCACCGTCAGCGTCTCATC 2473424 28 100.0 32 ............................ AAATCAGCAGCACCTCAAACATCTGCTCGTCA 2473484 28 100.0 32 ............................ CTACACCTACGTACTGGGATATGTAATGCGTA 2473544 28 100.0 32 ............................ TGCACGTTGGGCGCGGTCATGCAACAATAGCG 2473604 28 100.0 32 ............................ ACTGGCAATCCGCTATGAAGATGGCTTTGCTT 2473664 28 100.0 32 ............................ AAAATACCGATTACCTCGGACTTAATGCCATT 2473724 28 100.0 32 ............................ TAACGCCCCTGCATGGCAGACCGATATCTTAG 2473784 28 100.0 32 ............................ GTATAAATTTAGAAAATATATAACCATTCTAT 2473844 28 100.0 32 ............................ ATGCGACGACACAAAAACGTGCTCGTTATCTT 2473904 28 100.0 32 ............................ TATTTGAAGTCTCTTGATTTAGAGAGGCGTCT 2473964 28 100.0 32 ............................ AATAGTGAAATCGTAAGTATTTAAGCTGTCGA 2474024 28 100.0 32 ............................ ATTTCAGACAACAAGCCGTACTTGGTTGCTAT 2474084 28 100.0 32 ............................ GAAATGTCGGTCTTTAGCCCTTATTTGACGTA 2474144 28 100.0 32 ............................ ACTGCCAGTCGTCTTGCTGATTCATGCGGTCA 2474204 28 100.0 32 ............................ ATATCACGATAGTTTCAACGATATACCAAGCT 2474264 28 100.0 32 ............................ GTTACGGCATCCGTGATGCTCGATGAAAAAAT 2474324 28 100.0 32 ............................ AAACAGGAACGCTTAACAGTAAGGTAAATCCA 2474384 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 82 28 100.0 32 CTTCATCACCGCATAGGTGACTTAGAAA # Left flank : ATGTGCATGTTAAAGGTATTAAAGAAGTCGGTGATAAAGCGACTGGTTATGTCAGTGTGCAGCGTTACCGATTTAAACCAATTGATATACAAGCACAGACATTGGCAGATAAGTTAAAAGTCAGTTATGAGGAGGCGATGGTCACTGTCGCCAAACGCAAAAAAGAGATGGCATTGCCATTCATTCAGATGCGTAGTCATACCAACAATAGTAATTACCGTTTAAGCATTTTACAGTCGCCTTGTGATAACTCTCAAGCTGGTAGCTTTAATACTTATGGCTTAAATGGTATGCAAGACACGGTTACCGTTCCACATTGGTAAGCTAATTAAATGGTAATGACGAATTACCCAAAAATTAAGCATAAAAACCCTTTTTTTTACTATTTAAAAACTTACAATGAAATCAATCAGTTACGATAAGGTGAAAAATGGAGGGTAAAATAGGGTATTTTGCCCTCTACGCCTTGTCGTAACTGAATTTTTTGAGGTATAATTTCT # Right flank : ACTTACAAGCGTCACCTACTGTCGTGTATTTTCTAACTTTCCTATAAACCTAAGCGAAGTGGGTTTTAATTATTAGCCACTCATCGTAAGGTGGGAGTGAAGGTCAATATACAGAGCATAACGACCAAGTCATCAAATCATTATCTTAGTGGGGTGTGTAGTATGAAGTCACTATCAATAGGCAAGCTACAGAAAAACACGGTGCTAGTCTTCCAAGGCGTCCTTGGTCTGTTTAATATTTATACCTGTCATATCAGACCGCTTATTACTGAAGCCTTGACGGTTGAGTATAGCGCTGCTTTGACTAGACCTACATTATTTATCGAAGAAAACAAAAAACAGTTTATAGTCAACAATTTTGAGCTTTTTCACCTAATCAAAAGCCCTCATGTTGATTTTAATGTACTAAGACAAGAAGTATCTGTGAGATATATCCTAAAGGATGATTTTAATTTTGATCTCTGTTTTTATGAGCTTATTGCATCGATTGCTCAGCATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //