Array 1 9592-11277 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIJZO010000026.1 Streptococcus sp. 2018110 Scaffold26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9592 36 100.0 30 .................................... AGAAAAGCTATTATCACTTGGTAAATTTCG 9658 36 100.0 30 .................................... TTGTTATCATGCTTTTTTAACTCTCCAAGT 9724 36 100.0 30 .................................... TTAAAATTAAGAGTAAAAGACGTCCAAGGT 9790 36 100.0 30 .................................... CGGCGGTCAAGGGGTTTGTTCACACCGTTA 9856 36 100.0 30 .................................... AGGTTAGGTTAGTTGAGGGTAGTTTAGATA 9922 36 100.0 30 .................................... TAGACTACCTTAGTCCTGTTACTAACGAGT 9988 36 100.0 30 .................................... TTATGTGATATCGAAATCAACCCGTATGAA 10054 36 100.0 30 .................................... TAGCTTCGGTGGTGAATCCACTAAGAGCCA 10120 36 100.0 30 .................................... ATGAATTTGTGTCGTTCTAGTATCTCTCAT 10186 36 100.0 30 .................................... TTTTTCTGTGAACCAATAAAATAAACATCA 10252 36 100.0 30 .................................... TATTGGCATTTTTTGATCATTAGCTGCTAC 10318 36 100.0 30 .................................... TGGTAAAGAGTTGTTTTAGATAAGCGTCAT 10384 36 100.0 30 .................................... ATTTACAAAATTATCAATACTGATTTGTAT 10450 36 100.0 30 .................................... TAGCAGGTACTATAATAAATATTAGGGCTT 10516 36 100.0 30 .................................... ATCGGAAACACCCTCAATACCCCAAGAGAT 10582 36 100.0 30 .................................... TGAAACTTTTTCAGCAACGGCTGGGAATGT 10648 36 100.0 30 .................................... TATAATGACGTTATTATACTAGCTTATGCT 10714 36 100.0 30 .................................... TACCGTTAATTGGTAACGGATACGACGCTT 10780 36 100.0 30 .................................... ATAAAAATAATCAAAATATAATCTTAAAGC 10846 36 100.0 30 .................................... TCGAGGAATCGGATGTGTGGATGTTATCTG 10912 36 100.0 30 .................................... TTCTTTACGATTTCCCAAGCTGTCTTCCTC 10978 36 100.0 30 .................................... AGGTATAGTTTTCTTAGGTTCTTTCCTAAT 11044 36 100.0 30 .................................... CTTTAACCTTGAAGGAAATGCACAAATCGT 11110 36 100.0 30 .................................... ATAACTCCTTGCTACGTAAAGCACGCTTGT 11176 36 100.0 30 .................................... TTTGCACCAACAATCCCTTCAACTACTTCT 11242 35 88.9 0 .........................A.-.A.....G | T [11275] ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.6 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC # Left flank : GAAAAACCAGAAGTAAAATCAATTATTGAAAAATTAGCAAATTCTATTACTGAACTAATCTCTTATGAATGTCTAGAGAATGAGCTTGATTTGGAGTATGATGAGATTACGGTTTTGGAGTTGATAAAGGCGTTAGGGGTCAAAATTGAAACTATCAGTGATACGATTTTTGATAAAATTTTTGAGATTTTACAAGTTTATCAATTTTTGAATAAGAAGAAATTTCTTGTCTTTATCAATGTGTTATCTTATTTGACGGTGGATGAAATTCAGAAAACTAGGGAGTATATTGAACTTTCCAATATGGATGTTCTTTTTCTAGAACCGAGAAAAAGAAAAGATTTCCCTCAGTATGTTTTGGATAAAGACTATTTCTTACTATCGGAAAATATGGTAAAATAAATACATACAGTACAAATATTAGAAACTATTCGAAACTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAGATTTTGTGATAAAAAATAGTCTACGAG # Right flank : GCAGTAAGTTTATAAAGGAAGGAGGGGAGTAACTGGATGTCAAAACTGTTATTTTTTAATACTTCTATTTCTAACAGTAGTAGTGAATATTGTAACTTTAATTATCAAAAAAATTACTAAAGAGATTGAAAGAAATAAGTGGGGATGAAATTGATAAAGAGCTTAATTTAATAGGTCTTCCTGATTAAAGTCTGCATTTATATCATTGTTTTAATTTTTTATAATTTTTACGATAGCCTAGAAAATACTGTCGAAATTAATTCCCCTCCATTTTCCTCCAAGATTTCTAACTGACTCTTGTCCCACCCCCTTTTCCATGCTATACTATATGTATTCGTTTTACTTCAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTGGGAACTGGTTCGACGGCATACTATTTCGTGCAGGAGATTGGTCGCCGGGTTGCGGAAGAGGGCTTGCAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.80,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //