Array 1 251465-251858 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIIL01000001.1 Klebsiella variicola strain TUM14058 sequence001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 251465 28 100.0 33 ............................ CACCTACCAGCAGTTTTTCTCCTATCTGGTGCC 251526 28 100.0 33 ............................ TAGTTTTCAGGTAGTCTCCCACCGTGGCGGCAG 251587 28 100.0 33 ............................ TTACCAGGCGCACTACTGACGCCGGGTTAGGAT 251648 28 96.4 33 A........................... TGGCGTCGTAGACGTGGCGCGTTGAGCCGCAGA 251709 28 100.0 33 ............................ CATCATGGCGGCCCAGAAGGCGCAGACCAGCGC 251770 28 100.0 33 ............................ TCAGTGGACCGGCCAGGCGTATATCAATCTGGG 251831 28 92.9 0 ...................A.......T | ========== ====== ====== ====== ============================ ================================= ================== 7 28 98.5 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TCAGCGTTGGCCAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGATGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGTCATCTGACGCTCCCGGCGGAGGATGTGTGGGTTTTTCCGCAGAAGTAACTACGCGAAGCCACGGAAGGCAAGCATCAGTATGTCGCGCTACGTTCTGGGGATGACAAAAGCGTTTTGCGCCTGGCTGCGGGGCGGGCAGGCCAGTAAGGTATATCGGTCCAGGTCAGCAGCAAGTCGACGGTGGTGATATGGGGACATACTTTTTCGTTTGATAAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTATCGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGGTTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCCATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATATTTTTTATATGATTTTACTTATAAATATTCGTGAACTATGTTTGTTCTATACTTTCTTTAGGGACATCTAAATCGTTCGAGTTTCTTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAACTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAATTTCCCAGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGACCAGGGTTTCGCTACAAAATCAACATGCCATAGCGGCGATAAGTTTTGAGAACTGCCCAGCGAAAACCCGGACG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 260612-261126 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIIL01000001.1 Klebsiella variicola strain TUM14058 sequence001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 260612 28 100.0 33 ............................ CGTCGCTTTTGAACGTCGGCGAAGCCAGATAAT 260673 28 100.0 33 ............................ CACTACCTGACCAGCGGCGAAGCTTTCCGGGAC 260734 28 100.0 33 ............................ CAAGCCGCTCTCATTGAAACTACTGGCAAAAAA 260795 28 100.0 33 ............................ CGTGATGGATTCGAAGCCGCGGCGCGGCGTCAT 260856 28 100.0 33 ............................ TCAGGATGGCCAGCAGTAGCGACATGTTCGGCA 260917 28 100.0 33 ............................ CGCCGCTCCCGTCCGGCGTATGCGCCAGCAGGT 260978 28 96.4 33 ...........A................ CATAGCTGGTTTGCGCGGTGGTAGACACAAAAA 261039 28 92.9 33 ...............A.....C...... CCCCGCTTTTGAGCACGCGCTGACATTTGTTCT 261100 27 85.7 0 ......A...T.T....-.......... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 97.2 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATTAATGAGCTGATGGGAGGAAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTTTTCGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTATTTGATTCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGGGAGGTCAGAAAGCCGATTATTGAGCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATAGTGGTTAAGCGCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACGCATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGCAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGATAGAGAAGGGAACTGTTTAAAACAATAACGGCGAATGATTATTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGCCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAATTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTACGATGAGGTAGAGCACAGGCTACAAATTGGCT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //