Array 1 7532-6587 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRBG01000018.1 Cereibacter sphaeroides f. sp. denitrificans strain IL106 NODE_21_length_184759_cov_54.924408, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 7531 29 100.0 32 ............................. GCTGCGGCCGAGGCAGCTGCGCGCGGCGACAT 7470 29 100.0 32 ............................. TCATACGGACTTGCCCGTTGATACGGTCATCG 7409 29 100.0 32 ............................. GCCCTACCCTCCTGCTCCGTATCCACGCGATG 7348 29 100.0 32 ............................. CCGGGCTCCGAGATCAGTTCGCCGGGCTTCAG 7287 29 100.0 32 ............................. GAACGGCCGTGCCTGTGCTGCGGGCGCGCCAT 7226 29 100.0 32 ............................. TCTCATCGTAGGTGTTGGCCTGATGCGTCGCC 7165 29 96.6 32 .....T....................... GGATTACCGGAGAGCAGCTTCTGGCGCAGCAC 7104 29 96.6 32 ........G.................... GCGCTGCTGGACGGCGCGACGCAAGGGCCGTG 7043 29 100.0 32 ............................. GCAGGCGAGGCCGCCGGATCGGCCAGCGCTGC 6982 29 96.6 32 .................T........... CGCCCGTGGCTGCTGGACTCTCAGCGTGTCCC 6921 29 100.0 33 ............................. GCGCGGTGGCCTCGTGCCCCCCCATTGCATCGG 6859 29 100.0 32 ............................. ACTTCTGTCGAGTTGTTTGCCCACCACGAAAC 6798 29 100.0 32 ............................. ACGTCCACGCGATGCTCCGCGCCACGCCCCTC 6737 29 100.0 32 ............................. ATGATCCAGCGCGCCGGCGGCGGTCGCGTCGG 6676 29 100.0 32 ............................. TCCGTCAGACGGACGCCGTTGGACGCGAACCC 6615 29 89.7 0 ..........................TGA | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.7 32 CCGTTCCCCGCACGCGCGGGGATGTCCCG # Left flank : GGTCTTCTGTCGCGCATCATTCCGGCCATTGAGGATGTCCTCTCGGCCGGAGAGCTGCCCCGCCCCTATCCGCCGCCCGAGGCGATGCCTGTTGCCATTGAGGACCGTGCAAGCGGCGACGAAGGCCATCGCGGATGATGGTCGTGGTGGTGGTCAACGCGCCGCCCCGGCTCCGCGGCCGGCTCGCGGCCTGGCTGGTGGAGCTGCGGGCCGGGGTTTATGTCGGGGACTACTCGGCGCGGACACGGGAAATGATCTGGGAACAGGTGCTCGGGGGGCTCGATCAGGGAGACGCCGTGATGGTCTGGAAGGCGCCGACCGATCAGGGCTATGACTTTCGCACCTGCGGCAAGAACCGCCGCATGCCGGTCGATTTTGACGGCCTCAAGCTGGTGAGCTTCTTCCAAGCCAAAGAGAACTGACACCGCGCCAGGCTCCAAAAGGCCGGTGCGCTGTTTGACATTGTAAAAACGCTTGTTCATCAGTCTTCTGCAGGAAGA # Right flank : CCGCCGCGTGCTGCGGATCGGTCCTCGCCATCTGCCTGTGAGGCGCGGAAGGCCTGCGACAGGTCTATGGAGATCGAGCCGCAGCCCATGCAGACCGTGCCCTACTCCCGGAACTGGACGTCCAACGACCCGCAGGTCTTGTTGGAAAAGCTCCCCAAGGCGGTCTCCATCTTCTTCTCGCCAAAGCGGTCCCGCATCCAGAAGGCCATGACCACGATGTTCCTGCCTTCCTCGTCCACTTCAAGCACGCGCGTCTCGAGGTGCTCGAAGCTGTCAGGGTTGCGCAGCCGGGCCTTGACCGCGCTTACGAACTCCGGGTGCGATCCGTCCTGGGGGTTCAGGCAGTGCGGGGCAAAACGGCGCTCTGCGGCCTCTTTCGCCTCCGCCTTCTCGCGCTCGGCCTCCGCGGCCTCTGCCTGCTCCCGCTCTGCCGCGAGACGGATCTGGCGGCACGGAGAGAAGCGGGAGGGCAGGGGGCATGACACGATCCGCATTCCGTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCACGCGCGGGGATGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //