Array 1 9273-8517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADDIN010000019.1 Campylobacter sp. RM11302 11302_contig00019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 9272 30 100.0 34 .............................. GTTCAAGGCAGTTTTTCATAACCCGCTCCCGCTC 9208 30 100.0 36 .............................. GACAAAGCTCTACCCTTTAGTTGATATTTTTCATTT 9142 30 100.0 37 .............................. AGTCTTGGAAAAAGCCCTGAAGTCGCAGCAACTGGCA 9075 30 100.0 36 .............................. TCTGGATTATCTTTATAGAACTTAAGCCTATCTACA 9009 30 100.0 38 .............................. CTTTTCCAATTCATTATGGTTTGATACGCAGTTTTTGA 8941 30 100.0 35 .............................. ACAAAAGAAAAAACAGATAGTGTGTTTGATAGCTT 8876 30 100.0 36 .............................. AGCTGAGAGTTATAGAGCCATTTATGAAGGTGCTAA 8810 30 100.0 35 .............................. TTTTTCAGTATTGTGTATAGAATACAACTCATTTT 8745 30 100.0 36 .............................. AAAAGCACTTTCTTTTGCTCAATCTGCTGCTAGTTT 8679 30 100.0 36 .............................. AAAACATTGAAGAAGAGATTGCCCTTCAACAAGAAC 8613 30 100.0 37 .............................. TACCACTAGCCACAAAACTTGTCGCTTTTCCAATAGT 8546 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 100.0 36 GTTTCAAAATCCATAGGATTAAATTTTAAC # Left flank : GGTGCAAAAATTTGAAGCACTAGACAAGCAGACAGCAGAAAAGATTAATGAGATTGTGGCAAAAATTCATAAGGCACACCAGGAATTAGAAGTGGAGAATAAAAACATACTTATTCAAAATCAAAAGTTAGTAGTACTTCAAGCGGTTTTAGAAAAACAAATAGTATTTAATCAAGATGTTATAAACAAGCTTCAAGGGATATTAAATACCAAAGAAAACGAAAAAGGATACTTTGAAAAATGAAAAAGATACTTTTGGTTTTTATTTTTTCAGTAGAATTTCTTTTGGCTGGAGTGTGGAGTAGTAGTGGCGAAGACGGCATTAATCAGTAGAGTTAGACAGCTAAACGAAAAGACCATACAAACTACGAGCAGATAAGAAAAACTCAAGTAGATAAAGTGGTTGAGAATGATGAGCTAAAACAAAGGCTTTTAATTAATCATAGAGAGCTTTTAAAGAATGAGAGTATAGAAAAGCAAATGGTTGATATGACAAATGC # Right flank : AGCAACCAAATCATCATACATCGGCAATCATTGCAAATTATTATAAATATATCCGACTTAAAAGCTGCTTATAAAAGCCTTTTTTGCAAACAAAAAACCCTAAATATAGGCATTTAAATAAACTTAAACTTAGCTTTAAAAACTAATCCCCAAAAAAATACAAAATCTCTCTTGTAAAGTAAGCTAATCAACATACCCTTCATAAGGATAATTCTCACAAATGCACTTTTTTATCTGATTTGCTTCACGCCTAATTATTTGCCTATAAGTTAAAAACTGATTTTCAAATTTCACCTGAGAAGTAAGGGCTTTTATCATATTTAACTCTATTTTTTGCACAGCTTCGTTTGTAAACCTTATCCTTCCGGCATCAGTTTTAAAGTCTTTTGCTGTGATTTCATCTTTATTTAGCATATTAAAAATCAAATTATCCCCTAAAACAGGCTTAAAAATCTCAGCCAAATCAAGATGCAAGCTAAGCGACCTGTAATTTGGCTCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAATCCATAGGATTAAATTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //