Array 1 223363-220501 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWVC01000004.1 Sphingomonas adhaesiva strain DSM 7418 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 223362 32 100.0 33 ................................ ACGTCGGTACGCGGGACGATCTCGCTGGAGGGC 223297 32 100.0 34 ................................ CAGCACGGTCAAGCCGCCGCATCATGCGGTGCTG 223231 32 100.0 33 ................................ GTGTACCGGCCAGGACGACCGGCGCTGCTGGTG 223166 32 100.0 36 ................................ CCCGACGTTCGTCAGGCGCTCGCATCGCGCCGGGCC 223098 32 100.0 33 ................................ GCGTGATCGACTATTACGAGGCGGTAGGCCAGG 223033 32 100.0 33 ................................ ATCTCGGCGATCGGCTCCGACAAGGCGTCGGCG 222968 32 100.0 34 ................................ AGCTGGCGCGGTCCACGATCGCGCGCCAGCTGCT 222902 32 100.0 33 ................................ ACCGAGGCAACAGGTCGGCTGAGGCAGTCCGGG 222837 32 100.0 33 ................................ GCCAGCACGTCCAGCCGCTGCTCGATCAGCGCG 222772 32 100.0 34 ................................ GATCTTCGATCGCGACCGGCCGCTGAAGCCCAAC 222706 32 100.0 34 ................................ GCGGTGACGCTCGAAACGCAGTTCGACATCGCCG 222640 32 100.0 34 ................................ TGTCGATCACGAAGGATAAGCCGCGTGACGCCAC 222574 32 100.0 33 ................................ TACTGCCACCGCCTGTGCCGCCCGGTGATGGTG 222509 32 100.0 34 ................................ GCGACAACATCCCGACTGACGGCCCCGCCGGTGC 222443 32 100.0 33 ................................ GGCACCACGGGCGGCGCTGGCCTGTTCCGCAAG 222378 32 100.0 35 ................................ TCATCGCGCGGCGGATGCGCATCGACGAACCTGGC 222311 32 100.0 33 ................................ AGGCATTGTCGGCCAGGCTCAGCGCGGCCTGGC 222246 32 100.0 33 ................................ ATGGACGTCGTGCTGCGGTCGTATCCGCTCTAT 222181 32 100.0 33 ................................ TCGTTGTCGACGCGGCGCTCGCCTTCCACGATG 222116 32 100.0 33 ................................ GGCGTCCGCCGCCGTGGCGCTACCGTCCGGCTG 222051 32 100.0 36 ................................ TGCGCGCCCGTCACCGAGAAGTTGTTTGGCGCCCAG 221983 32 100.0 36 ................................ CTGGTATCCGGCGTCCTGGTGCTGACCGGCCTGGGC 221915 32 100.0 33 ................................ CCGATGAACGACTGCGCCGAGGCGGTGTCGAAG 221850 32 100.0 35 ................................ CATGCCTGGGCGATCAGCCGCATAGCGGTGTCCTC 221783 32 100.0 32 ................................ ATCCCGTCGGGCGACTTGCCCAAGAACCGGGT 221719 32 100.0 33 ................................ CGCGGCCTGTCGCAAGCCGAGCTGGCCGATCGC 221654 32 100.0 35 ................................ GTTGTTGGTGATGAAGCCGACCGTCTCCACCGGCG 221587 32 100.0 33 ................................ TCCCACACCTGGCGCCCCGCCGGACGGGAGACA 221522 32 100.0 34 ................................ GGCCTTGTGTTGCGTTTGCAGCGTCCATTCCGAT 221456 32 100.0 35 ................................ ACGGAGACGCTGCTGAAGACGGCGATCTCGCAGGC 221389 32 100.0 34 ................................ GGCAGGTCAGCGACTGGCAGGACAAGGCGGCCAA 221323 32 100.0 33 ................................ CCGTAAGGACCTGACGGTGCGCGGGGTGTCGCT 221258 32 100.0 34 ................................ CACGATCCAGACGGCGGCCACTACCGCCCGCAAC 221192 32 100.0 33 ................................ ATGGAGAGACGACATGGCACGCAAGCAGAACGC 221127 32 100.0 33 ................................ TGCGCCCGCTGTGCCCGGACGCTGTGCGGGTGC 221062 32 100.0 35 ................................ CATGACCATGACGTTGCCCGTGACCAGGACATCGC 220995 32 100.0 35 ................................ ATGCAATCCTACGATATCGTGGTGCATCCGCGGTG 220928 32 100.0 35 ................................ TACAATTACCAGGAGCGCCAGGCGGCGGGCGACTT 220861 32 100.0 33 ................................ GAGCCGTTGACGACGATCAGATCGACGTTGCCG 220796 32 100.0 34 ................................ CGTCATCGTTTCTTGCCCGCAGGACCAGCAGCGG 220730 32 100.0 34 ................................ CAGGCAAAGGACGACTGATGGCGCAGCTGTGGAC 220664 32 100.0 35 ................................ AACGTGGGTAAGTCGCTGTCGGTGCTGGAATGGGT 220597 32 96.9 33 .....................C.......... TCATCAGGATCATCGGCATGATCCTCTCCATCG 220532 32 78.1 0 .C........C.A...A.C..C.C........ | ========== ====== ====== ====== ================================ ==================================== ================== 44 32 99.4 34 GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Left flank : TGTGGAAATAGCGGCGCCGCGATGCTGATGCTCGTGACCTATGACGTCGGAACCGAGGACCCCGCCGGCCGCCGCCGGTTGCGCCGCGTCGCGCGGACGTGCAAGGATTTCGGCCAGCGGGTCCAGAATTCGGTGTTCGAATGCGACGTCGACCCGGCGCAATGGGCGATGCTGCGCGCCGCGCTGCTGGACGAGATCGACCCCGCGAAGGACAGCTTGCGCTTCTACGCGCTGGGCGCGAAAGGGCGCATGAAGATCGAGCATGTCGGCGCCAAGGCCGCGCCCGACCTGACCGGCGCGATCATCCTGTAGGCCTGCGCCGCGCGAACCGGAAGCGACGCGCCCCCCAGCCGGAGATTCGCGCGCAGCCCAAGTCGTTGATATACCGATGCCACGCCGTCGCGGTTCAGCCGGGGCGGGGCCGCACCGGCGCGCGCGCGAAGCGGTTCGCGCAAAGCGGCGGATTGCGCGTTGTTTCTCAATGTGAAACTAGCGGTACC # Right flank : GACACCGACACTACAACCCCGCCCCGCCCCCGTCAGCCCGCGCTCTTCGCCAGCGCCGCCGCGCCATCGGCGAAGCCGAGCATCGAGAAGGTGAGCGTGACGGTCTGGCGGATCTGGAGGCGGTAGACCGCGTCGGCCTGGTCGGTCACCGCGACGAGGGCGGCGAATTGCGCGGGGGTCAGCATGGCGCCGGCCTGGCACCCCTTGGGCTGGCAGGCGACGAACGGCAGCCGGACCAGTTCCTTGCCCTGGCGGACCAGTTGCACGCCATCGGGCAGCCAGACGCCGATCGGCGTGTCGACCGACAATTGCCAGCCCTTCCCGCCCGGCAGGGAGCGGAGCATGAACTGGAGCGCGACGTTTCTGGCGCCCGTGTCGTCCTGCAGCGTCACGGTCGACATCAGGCCACAGATGCGGACGCGCGGCGCCGGATCGGTGCGGGTCTCGCAATGCAGGTTCCACGCCTGGAAAGGGCGGTCGGAACCCTGCACCACCGGGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //