Array 1 2523-2831 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKIS010000047.1 Pelagibaca abyssi strain SY10-16 SY10-16_ctg047, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================ ================== 2523 37 100.0 30 ..................................... ACCCAGCATAAACATGCCGAGAATCAGCAA 2590 37 100.0 31 ..................................... TTTTCTGGTCTGAATAACCATCGCACCGTGG 2658 37 100.0 31 ..................................... TTTCCGGAGTGCCCGCCGAAGCGGGAAGCAC 2726 37 100.0 32 ..................................... TCGATTTCTTCGTCCGTCGCGACCGGGAGTGA 2795 37 91.9 0 ...............................C..CG. | ========== ====== ====== ====== ===================================== ================================ ================== 5 37 98.4 31 ATGCTGATGACATGACCGCATGGAAGCGGATTGAGAC # Left flank : CTCTGCCGCCGACTACGCGAATGCGATGGAAGCGCGCGATGCTTCGCGGCGGGCGGATGCCCTGAACCGGCTGGTCTCTCTGGGCGTTCCGCTGGGTTTGACTGTGGCGCTTGCGGATATCGAGGCGAACCAGCGGGGCGTCGTGCTTCCCGATGGTCGGTCGCCGGGGATCGTCGATTTCTGGGCCGACACCGGCGTCATTGCTTTTTTCGTTTTTCTGCTTTGGGATGGGGCTGCTATCGCGAAGGATTGGCAAGGGCTAAACTGGAGGGAGCGATTCTGCGGGTTGTGGCGGGTTTGGAGTGTCGCGCTTGGGGCGGTTGTTCTTCACCTAATGCGATAATCATCCTTGGATATTTTTTAACTATACGATAATTATTGATAATATATGGAAATCATGATTGAGTTCCGGGCAATCTGGATGCGGGGTGGAAAGTAGTTGATTGCTCTTGGAGATATGACCTATTTTGGATTTGCAAATATGGTGTTGTGGAGGGTAG # Right flank : CTGACGGGGCAAAACTTTCCGTCTTTCTGTGGTTTTCGGACCTTGCGTCCGGGGCCGTTTGACGCAACACTCCTCTTGGTTGTGGAGGTGTCGATGGGTTTTCTTCATGTAGAAGGTATCAATTTCGACAGCTGTATTTTCGACACTTCGGATATCTCGACCATTCGCGGCGGGTCGATGCTTCTGGAAAGCCTCGGGTCGGAGCTCTCGAGCAGATTGACGCTTCCCCTGGTGGATGCGGGGGCCGGCCGCGCGGTATTTGCACTCCCGGAGGGCGGGTGGGAGCGGATCGCCGGAGAGCTTGCGCGTTTCCTGGGCTCGGATCCTTGGCGGCATTTCTCGATCATCACCGGCACGGGGGAAACGCGCGGGGCCGCCCGCTCCAGTGCAATCCTGTCGGCGCCTTCACAATGGTCGATCCCGCCTTTCGATGCCAAGGGTGCGACTGGCCCGGACCCCGAGGATTTCAAGCGCCCCGCCACCAAATGCGAAACCGACAA # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTGATGACATGACCGCATGGAAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 9175-9551 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKIS010000047.1 Pelagibaca abyssi strain SY10-16 SY10-16_ctg047, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 9175 37 100.0 31 ..................................... TTCCTGCTGCGACGAGCCGATCCACCATTGC 9243 37 100.0 32 ..................................... AGTGCGCGGGATTGCCGAGTTCGTCAGCATGA 9312 37 100.0 30 ..................................... CAAGGGAGAGATCGACTTCGGAATCATCTT 9379 37 100.0 29 ..................................... GGTCCTCAATATTGTCGTGGTTCACCTCC 9445 37 100.0 33 ..................................... GCGCACGATGATCGGATCGGGAGCTTCGCCCAT 9515 37 91.9 0 ...................G............T...T | ========== ====== ====== ====== ===================================== ================================= ================== 6 37 98.6 31 GTTCGAACGATATGCCCGCATGGAAGCGGATTGAGAC # Left flank : GTTGAAAAGGGCGCGGCGATGAGGTCAGGCGAGCCAGTAGCCGCTGCGCGGCTCGATCGGTACCGCGTCGCCGAAAACCCGGGTGCGGTGTTCGCCATTGGCGCCGATGACGTAGACGCGCAGGCTGTCGCCCGGGTCGAGCAGTGCGGCGACCCGTTGCGACACCGCCGCGGCGCGCGCCTCGGTCATGCGCACCTCGAAGACCGATTTCTGCACCCGGCTTGCCTCGTCCTCGAGAATCTTCGCGGCCTTGCGGCGGATCTTGTTGCGCGAGATATCATAGGTGAAAACCGTGAGCATTTCTCCTCGCGCCATGGCCGCGACTCCGCCGAAAAGGGTGATTTCTGCTTGGAAAGATTGCATCTATTTGTGAGGAAAGTCAAAAATGGATTTCGCGCTCGAAATTCCTGCCCGCTTCCGCAATTTTTATATCAAACCGGTTACCATGCTTGGATTGTGTGTTGGATTTTTGCTTGCATGATTGGGGTTCCGGCGCCTAG # Right flank : GTGGGTGTGCCGACGCCCGTGAATAGGGCGTCGGCGCGAACGAGTTGCCTGCTTCGGAGAAGGTGGCCGCTCGCTCAGTAATCCTGCACCTGCGGCTGGAAGGGGCGGTCGGCTGGCGCGCGCATGTGCCAGGCCAGCGCCCGGGCTTCTTCAAGCATCAGGCGGCGCATCGATACCTTGCGGTCCGAATGGCGGCTGCGCACCGCCCGGTCCAGCGCGGCCTCGTAGCCCTGTACGAGCGCCCGCCGGCCCTCGGACGAGATTCGGACCGAAGCGCCGGACGGCGCGAACATTCCGGCGCGCAGTAACCGACCGGTTGATACCGTCGCCTGATCCTACGACTTCCAGTTCCACGGGAGCAGTTCGTCGAGGCGGTTGATCTTGTGATCGTGGATACGGTCGAGGACATCAGCAAGCCACGCT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGAACGATATGCCCGCATGGAAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 288459-288149 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKIS010000006.1 Pelagibaca abyssi strain SY10-16 SY10-16_ctg006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =============================== ================== 288458 38 100.0 28 ...................................... CATTGTCGCTTTCGGCGCGGCGCACCCT 288392 38 100.0 31 ...................................... CTTGCACGGACATAGGCTTCTGCTCTCCTCC 288323 38 97.4 31 .....................................C TCGGCGGCAAGTTGGCAAACCTCTTTGGCAA 288254 38 100.0 31 ...................................... TCGTCGTAATTGTCGTATTTATCAAAACCAT 288185 37 84.2 0 ..........................G...G-..T.TG | ========== ====== ====== ====== ====================================== =============================== ================== 5 38 96.3 30 GTGCTGGCGACATGACCGCGTGGAAGCGGATTGAGACT # Left flank : ATAGCCGTAGCTGTCCGGGTGGAATTCCGGTTCCAGCAGCGGGCCGAGCGCCTGCGCGCAGGCCGTCTGCACGATGCGGTCGCTGATGCTTGGAATGGCCAGCGGGCGCTGGCTGCCGTCCGGTTTCGGGACGAGGTGATGGCGAAGCCGGCGAGGCCGATAGTGGCCGTTGCGCAGTTTGCCGGAGAGAACGCGCAGGCTGTCGGTGGCGATTTGGGCGAACTGGTCGATGGTCTGGCCGTCGCCGCCCGAACAGCCCGCGTTGCGACGCACCCGATCCCATGCCAAGCTGAGCGCGCCGAATGACGTCATCCGGTGGAAAATAGTGGGCGACATGAGCGATTCCTGCTTGGATAAACTCTATCTATCTAGCAAATATATGTATTCTGGGATTTCTGTTAAGAAATTTCGTTTTGGGGGATCGGAAGCGGCAAGATTGCCTTTATCGCTTGGATTGACAAATCAAAACCAAAGTATCTATAGATATTTGCGGAAGCTCA # Right flank : CTCAGGTGGAATCCTCCGTGCCGACCAATACCCTGCCTGCACCCATGGCCGTGTCCGCGCCGATATGGGCGAACGCTGACAGGCCCAAGAGGCCGCGCAGATCCGCTGAGGCCCAGGGTAGGGCGACGGTCCCGTCGAACCCCTGCCGGCCCTTCTTTTTGCCGAAGGAACGCCTTGACAGCTTGCCCTCGATAGCAGCGTCGCGTGACAGGGCGCGCGCCTCGGCCTTCAAGGACGTGCTGTCGAGGTCGAGCACCCGCTGGTGCCATTGCGCCAGGCCCGATATCCGGTTCCCGACCCCGGTCAGCGTCGAGACGAGAAATTCGGCGAGCATCTCCGCCTCGTCCTGCGGTATCGGCCGGGGAGAACCTTGTGCTCGGGCGTCTGATTTGCGCAAGATCGGTGTCAGAGTGCGCAGCACGATCGGGCCGTTTTGCGCCGTCACGGATGGCGGGGCGAGTTTGCGTCGCCCAGCATGCGTGACCCGAAACGACAGCTGT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTGGCGACATGACCGCGTGGAAGCGGATTGAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //