Array 1 174462-170721 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLFI010000001.1 Elizabethkingia anophelis strain EA7 NODE_1_length_684083_cov_142.049054, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 174461 47 100.0 30 ............................................... CATTGCTTCATCAATTGCGTTTTCCGGATT 174384 47 100.0 30 ............................................... AATTGTTAGAAGTTGGTAGAGACTGATAAA 174307 47 100.0 30 ............................................... CTCAGCAATGTTATATACGATTTGAGTTGT 174230 47 100.0 30 ............................................... TTAAGAGCATAATCAGCATCTACAGTGTTG 174153 47 100.0 30 ............................................... TCATGGAAAGAATCCAATACATTACTGATT 174076 47 100.0 30 ............................................... AAAGTCTATTGAAATAATCTCCAAACTTCT 173999 47 100.0 30 ............................................... CCAGGTGAAACATGGGACCCGAATGCTTCA 173922 47 100.0 30 ............................................... CCAGGTGAAACATGGGACCCGAATGCTTCA 173845 47 100.0 30 ............................................... TTATTACGGGCTTTTTTTCGGTTGTAGTGT 173768 47 100.0 30 ............................................... TTGACATTCTTATTCCTTGCAACCTTATAA 173691 47 100.0 30 ............................................... GAAGTGTCGAACATTGGGGCGTTTGGGATT 173614 47 100.0 30 ............................................... GGGCTGAAAATTTCTTCCATAAGTCTGAAC 173537 47 100.0 30 ............................................... AAGAATGCAATGGAATCGAAAAAATGTATT 173460 47 100.0 30 ............................................... AACCCTTTCCGCTTCTTCTTTGTCGGCGAT 173383 47 100.0 30 ............................................... ATACAGAGGATGCGCAGGAATACGATTATA 173306 47 100.0 30 ............................................... ATCTGCATCAATATCGTCAATTGCCTTTTG 173229 47 100.0 30 ............................................... AAACTGAGAAAGTTTTACAGCTTGATCTGT 173152 47 100.0 30 ............................................... TGTATGGTATCTGCGTTCCAAATTCTAATA 173075 47 100.0 30 ............................................... GTAATTGCGTTTGTAATTTCGATTGAGTTC 172998 47 100.0 30 ............................................... AAAAGGAGTTCTGCAGAATGAAAGCGAAGG 172921 47 100.0 30 ............................................... CATATCTATACCACTTAATAATCGAGCAAA 172844 47 100.0 30 ............................................... GAGGCTCAATGAGCTGTATGGAAGCTGTCC 172767 47 100.0 30 ............................................... TACCCTGAGACTTTGGTGTTTCGGATTTTG 172690 47 100.0 30 ............................................... CGGTATCTGATACCAGAGTTTCGATAGCCT 172613 47 100.0 30 ............................................... TAAGCTCCTCATGAAGATTAAGAGCGTTTG 172536 47 100.0 30 ............................................... AGCCCGTTAATATCCTGCATTAAGGTTCCA 172459 47 100.0 30 ............................................... GGTCGAACGCCTCCGGTTGTTTAACTCTCA 172382 47 100.0 30 ............................................... GAAAATAATCACGTTCAAAAAGGGAAGTTC 172305 47 100.0 30 ............................................... AATAACCCATCTGTTAAATAGCTTAAGTTG 172228 47 100.0 31 ............................................... GGAAAAAGCAAAGATAAGCCTAAAGAATTCG 172150 47 100.0 30 ............................................... TAGAATTTGTATCTGCAAAAGATGAAAGAG 172073 47 100.0 30 ............................................... TAAGACTTAGAATATCCTTACAAAAAAAAT 171996 47 100.0 30 ............................................... GTAAATAGCGTTATTCCCATGTTATGAAAC 171919 47 100.0 30 ............................................... TAAATCCTGCCTGTCATGCAAACGTGCTTC 171842 47 100.0 30 ............................................... CGAGTCTAAATAGCCATGTGGGCGTGCATG 171765 47 100.0 30 ............................................... CGAGTCTAAATAGCCATGTGGGCGTGCATG 171688 47 100.0 30 ............................................... GGGTTCCCATATATAAAAAATAGGATCATA 171611 47 100.0 30 ............................................... GACAACATTATTAAGCTTTCAGAACTTGAA 171534 47 100.0 30 ............................................... AGAAAAAGAGAAGGTATGAGACTGCTAGCA 171457 47 100.0 30 ............................................... TATAGTTCACTACCCCAGAATTGCATAGAA 171380 47 100.0 30 ............................................... TGAAAAAATAACGTGTGAAATTAAGAGTAG 171303 47 100.0 30 ............................................... TGAAAAAATAACGTGTGAAATTAAGAGTAG 171226 47 100.0 30 ............................................... GCATATGAAGTGAGGTACTTTTATAGATTT 171149 47 100.0 30 ............................................... AGCTTTTAGGGTAGTTTCTGGTACTTCAGA 171072 47 100.0 30 ............................................... GGCCCATTCTTTTAAGGCACTAATAGGCGG 170995 47 100.0 30 ............................................... CGTTAATACATGATCTCCAATTGCTGGAGC 170918 47 100.0 30 ............................................... GTCTCTCTGTTCATCTGTGCAACCAATTTA 170841 47 100.0 30 ............................................... CAATTCCAAGCATACCCAACATACCGAAAC 170764 44 91.5 0 .....................................--..-....T | ========== ====== ====== ====== =============================================== =============================== ================== 49 47 99.8 30 GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Left flank : GATGGAAAGACCAGACCTTTGCTGGTGGCTGTAAAAACAACAGCATCATCACTATATAAATGTTATACAGGAGAAAAACGTTTGATTGCTTATCCTGAACTGATATGAAAGCCGAAAGGTTTAATGCTTACCGGATTATGTGGGTTCTAGTACTTTATGATTTACCAACCGAAACAAAGGAAAATATGCGGGATGCCAATCTATTTCGTAAACGTCTGTTAGATGATGGCTTTTCGCTTTTTCAGTTTTCAATGTATATCCGCCACTGTCCCAGTAGAGAAAACGCAGAGGTCCACATCAAAAGGGTAAAAGTCATGTTGCCTAAAGCTGGAAAAGTTGCTATTATGTGTATTACCGACAAACAGTTTGGTGATATTGAAATTTTCTTCGCCAGAAATAAAGAAGAACCACCGCCGACCTTTCAACAGTTGGAATTATTCTGATTTTTAAATTCTAAAAAATAATAAAATCCGTTGATTTTCAACGGATTAAATTTTGAG # Right flank : AAATTAAGGTGTTTTTATTGTAAATTAGATTTACATAATGAGCCTTTTGTGGTTAACCCTGTTTAGTCGATAAAGATCATTATAAAAAAACAAAAACCTTTCAGTACTCCTGAAAGGTTTTTTTGTATGGTTTAGGTTTTTAATTTTAATCGTGCATTTCGCTTTCGACATAGCCTTCATCTTCGATCTGGAAGGTCGTATGGCTAATTTTGAAATTACTGGTCGCCTGATCGGTGAGTATCCGAAGCATTTGGTTATGCGGAATGCTTTGATCGGAGACAACATGGGCGCTCATCGCATTGATACCAGAGGTTAGCGACCATACATGGAGGTCGTGCAGGCTTTTAACACCCGGAACTTTTTCCATGGTACTGCGCAGTTCATCAATATCTACATCTTTAGGAGTACCTTCCAATAATACATGAATAGCTTCCATCAGAAGTCGCCATGTTCTTGGGAAGATCAGTAAACCAATACCTGCAGAGATCAGTGGATCGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.87,4.91 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //