Array 1 294482-294710 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 294482 30 100.0 37 .............................. GAGGTGTACCCACCTTGTGCCCACTAAGGGGACAAAG 294549 30 100.0 35 .............................. GCTAAATGTGATAAGTATTTTACCAAAGAAACAAA 294614 30 100.0 37 .............................. GCTATCTAATTCAGGCAAATTAAAATGCTCTATAAAA 294681 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 37 ATTTACATTCCAATATGGTGCTACTAATAC # Left flank : TAAATCAATGAATAACTAAAAGTTAGGAATTATGGAGGATTTTCTTACCTGTATCAGAAAGTCTTATATTTTATTGAAAAGCCAACATTGGATAAAGTTCTATCCAATGTTGGTTTTATAATTATATAGATTAAAAATGTGTAATTACTAATGATTTTATCATGGATAATATTCCATCCATGTTATGTTATAAAATAAACTTTTCTTCATATCTATTTCTTCTTTATTTAAATAACCTCGGTTAAATTATACATAATAAACATAAGATATACAAAACATTGTAAAAAGGTTTTAATAACATTTGAAATAGTAATATTACTAAAATACTCATAAACTTCATAGAATCTAACATTATACCCATTTTCATTTAACATTAAAAAATAAAGTGCTTACTATTTCTTAGGGTATCAGTATCCAACTAATATATATAGTTGTTTTGATTGTTACGAATAGTGTTACTGATACAATTTATACCTATTTTATCTAAAATCTACAGTTAT # Right flank : CACGTTCATCTATGATGCACTATATGTCTATAGTATAACTTCTATTTCTGTCTACCTACTAAGTTGGGATTTCTTATAGTCTATTATTATAATACAAGTTATGTTAAATAATTTATAAACCATTAATATAACTATAATTGTCTACTCCCTTATATTTTAACATCATCTTAGGTAGACAATCAAATAAAGTTACTGGTTCTATCTTCTTTTTTACCCCACATATCTTTAGTTAACCATCTTTTATTTCTACTTTTGAATAATATTACAGAATCTTTATCTTTCCTTATTATATCATCTAATTCATATTTTAGTTTAATTATTTGTGACTCTGCTAATTCCCCTTCAAATACTGAGTTTTGAATATGTGATAAATATTTTTTACATACTTTAAAAGTTCTATTTAAAACTCTCTGCCCCTCATCATCACTTTTTATATCATAAACTAATATAACATACATTTAAACCTCTCCTACCACCATATTTTAAATGGTTCATATTCT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCAATATGGTGCTACTAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 1767143-1766924 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 1767142 24 100.0 41 ........................ TTAAATTCATCACTTCCTTGCAATATAACTGCATAAGGTTT 1767077 24 100.0 42 ........................ TTAAATACGGGCATGAATTTAAAAACAGTGAGTGAGGGTATG 1767011 24 100.0 40 ........................ TTAAATACAAGTTTTCCAATTAAGTTTATTGTTATTTTCG 1766947 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================== ================== 4 24 100.0 41 GTTGAACCTTAACATAGGATGTAT # Left flank : GCAATTTTAATTTAATATCGAACCACCTTAAATTAATGCCCGAAAACCTTCGAGATAAACAACGGAAGTTTTCAGGCATTTACTACAAATATAATATTTTAGATGCAGAGGACAATTTAGTTTTAATGCTTGAAGGGAATTTTACAATAGTTTCTTGGATGACTACCTGCTCTATCTTTAAAGTTGGAGTAAAGAGCATTTACGTCTCCGGATAACGATTTCTAAGCTTTAGATGGAGTAAAAACTTTCTCTAAAGCTTAAAACTCTATTTATAAAAATAATCATATATTTATAATGTTATGTGATAAAATATAGACAAAAGTTTTCCCAGGTAATTTTAAATAAGAATGTAGCCTAAGGTATTGATTTAAAAGGGTTTATACCCTGTTTTTTAATGTGATTTTCCAAAAGTCAAATCGCCTGGTAAATTTTTAATGAAACCTTGAAATATCAATGGGTTTGTGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTA # Right flank : ACCCCAATTCTTTCCAAATATCTTATTCTATCAGCGTCTTATCACCGGGCAGTTCAGTATAACAGTAAAAGGATATGATGGATTTATAGCAGAGTAATGTTAGAGGTAGTTTTTAGCTTAGGCTAGGAGCTACCTCTTTTTTATTGTTGTAAAATGTATAATAATATAATAAATATTTACATTTAGTCCTATATTGTACTATAATGTAAATAATATTATTAAGTATGGGGGGATTTAAATGAAAGCTTTGACTAAGATAGGTAAAATACTTGTAATATTAATAATTTTATCCGTCATAATTGCTATATCACCAAAGCTTGGGTCTATAGTATTTACAATAGTTCCAATAATATATTTAATCTATCTATTCAAGAAAGGACCTAAGTTTAAGAATTATAATTTTTTATTAAAGGGGTTAATTAGTTTCTTTTTAATATTAGTTTCAACCACAGGAATTGGAGGAGTTTTTTCTGAATTTGGAGAAGAAGATAATAAGTGGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 1785890-1785537 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1785889 30 100.0 34 .............................. AATATGAAAATCGAAGGATTAAGACAATTAATAA 1785825 30 100.0 34 .............................. GAGGCCCATAAAAAAATAAACGCAGGGGAACTAA 1785761 30 96.7 35 .C............................ GTACAATCTTTTAAGCACTCATAGCTACTTCCATT 1785696 30 100.0 36 .............................. TAGATATCTTTTCTTGTCTGCTCTATATGAGTTTTA 1785630 30 100.0 34 .............................. AGAAAGGTCTGTAATAGAATTTAAATATTTCGAA 1785566 30 93.3 0 ............................TG | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 98.3 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TCATGAGTTGGGCTAGAAGGATTTCAATGAGTATTAAATGCAAGAAAAAAGTATTGAATAATAATAATTTTGGAATGAATAAAATCAATAATGACAATAATCATAAGAAAAATATAAATTATAATAATATTGATTAAAGTGTAACTTAATATATAAAAAATTTGTTTAAACAAATACTTCTAGACCTTGGAATAGGTACAAAAACTAATGTAGGGTATGGAAGATTAGAAGGGATATAAGGTTTTAAGATCTAATATTTTACCAATCGATGTTAACTTAAAAACCTGCCTAAATAAGTTTTTTATAAAGGTGATTTATTAATAGGCGGAGGAATAATTGAATAAATCTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTACATGTTTTAAAGCATTGATTTAACAGGGATTGATTAATGTTTAAAGGAAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAATGAAACCTTGATTTTACAGTG # Right flank : AACTAAGCGGAACTATTAAAAGACAGGAAGTGGAAAAATGTTACATTTGAATTTGCTGCCAATTCTTAATTTCAAAAAAACTCCTTTATAATAATATTGTAATATTGAAATATTATTGGTATAATACACTCAAGTAAAGTTTATTATAAACTTATTTTGATTGTTATAATTGTGGGTTAATTTTATATTTAAGCTAAAGAATTACTAATTCATTCATATCTTAATACTTTTAAAATAGGAGAATGTGTATATGAAAGAATTTAGTATTAATACAGATGTTTATTTTGGAGAAGGCTCTTTAGATAGACTAAATGAAATTAAAAATAAAAGAGTACTAATTGTATGCGATAAGTTTATGGAAACTTCAGGTATGGTTACAAAAGTACAACAAAAGCTTACTGACTGTGAAGTAACCATATACAGTGATATTGTTCCTGACCCATCTGTAGAAGTTATTGCATCTGGTATTCAAAAATTACAGAGTTGTAATGCACAGATTA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 4 2394262-2393971 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2394261 30 100.0 37 .............................. ACTTACCTTCCAAAGTAAATACTGGTAGCTTAGGTCT 2394194 30 100.0 36 .............................. CTTCTTTTTCTAAAATGCCTATTATTAGCAATTTTA 2394128 30 100.0 34 .............................. TATTTTAAAGCTGCTGGTATAGTAATAGGGTTGA 2394064 30 100.0 34 .............................. GCAAATTTTTCTAAGTTAATCATTTTAGCCATTA 2394000 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 36 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : ATATAGTTGAGAAGAGAGATATTTTAGAGTTAAAAAAACTAAATGTAAATGAACATCCTTTACTTGAAAAGGAATTAAATTATAAATATGCAGATGAAAAAGACAATGTGCGATATTATATGATAAAGTATGATATTAAATTTAAAGAAAATATGGCTACACCTATAGATTCAGGAGTTTATTATGAAGTTATTACAGTAGTAAAACGTAAAAATAAATGGCTAGTAACCACTGGTATGCATAAAGCATCATTTCATAATGATAAGCTAACAATAGATAGTTAGAGAAAATTTATAGAAATCTGTTAAATAAAAGTTATAAACTTTTCCAGGTGATTTTAATTATAAATGTATCTTAAAGCATTGATATATAAGGGATTAAGTGGTGCTTTTAAAGGTATTTTAAAAAAAGCTAAATCACCTGGTAAATTTTTAGGAAAATGTTGAAATATCAATGGTTGTATGGTATTCTTAATTTTAAGAAACTTTGATTTTACAGTG # Right flank : CAACTAATGATAAATTAGTAGTGTTTAACACTGCTGATAGTGAAATTTCAGAAATTATAACGGCAGCTATCCATGACTCTAGTGGCATAGGTTCAGAAGATACGAGTTCTTTAAAATTTATGATTTTAGAAGGGGATTGGAATAATAAAGAAATTCCACAATGCTTTGAAGGAATTAAGTCCGCAGGTGAAAGTGGTAAAATACAAGTTTTAAGTAGAGGTAAAAATTTATTTACTAAAGATAGTATTTATTATTTAAACGTAGTTACAGGTAAGACTATAAGGAATCCAAGTAAATTTGTTAGTTCTTCTATTGCAGTTAAACCCAACACAAGTTGTATGTAGTAGTATTAACGCATTAGAAGGAAATGTTGTAGATATTGAAAAAGAATTAAATGCTAAAGCTAATCAAGAAGATTTTCATAAATTGGTTAAATTAGATAAACATGCAGATAGTATAATTAAGTTTATTTCTGAGCTTAATTGTACAGAATCCTTATC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 5 2726103-2725424 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2726102 30 100.0 34 .............................. GGTACTATTATAGATTTATAATCCCATCTTTTAT 2726038 30 100.0 36 .............................. AATTAAATTTTGCACATGATATAAGGTGGCAGCATC 2725972 30 100.0 34 .............................. TTATAGTCTGTAGCTTTTACGGTTGTAGCATTTT 2725908 30 100.0 35 .............................. TTTCCACATACCTCCAATTTCTTACCTTCAACTAC 2725843 30 100.0 35 .............................. ATGATTTTAAATTGCAATGTCTAATTGCACAACAT 2725778 30 100.0 34 .............................. AATAGAAATGAATATGCAAGTGTGACAATATCTC 2725714 30 100.0 36 .............................. GAAGAATCAGCGGTAAATTTCTTAGCTCAGTATATA 2725648 30 100.0 37 .............................. ATAAAGCTAAAGAGTGGGAAGCCGACTTATTTATATC 2725581 30 100.0 34 .............................. AGCTACATCATGATAAGCAAATTGAAATGCTTAA 2725517 30 100.0 34 .............................. AAAGGATTTCGGAGAGAGTATAAATTTAAGTCAG 2725453 30 90.0 0 ................G........C.C.. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.1 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : ACCTTAGGTAAGCCTATGTATGTAGTGGATATAAACCCTTTTAGAAATGAAGTGGTTTTAGGAAATCTAGATGATCTTTTAAATACAGAACTTATAGCTAAAGATGTAAATTATATACCTTTTGATAATTTAAAAGAGCCAATGGAAGTTGAAGCTAAAATAAGATATTCTCAAATTCCTTCAAAGGCAGTAATAACACCTATGGAAAATGATAAAGTAAAGGTGAACTTTACTGAAAAGCAAAGAGCCATAACTAAAGGTCAATCTGTAGTTTTTTATAAAGGTGATTTATTAATAGGCGGAGGAATAATTGAATAATATTATTTACCAGGTGATTTTAATTGATTACATGCTTTAAAGCCTTGATTTAACAGGGATTGATTAATGTTTAAAGGGAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAATGAAACCTTGAAATATCAATAGGTTTATGATATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : AGTGACTAACTACAATTTACTGTATTAGTTACCATTTTGTTATTGTTATAAGTATATTAGTACGAATAAAAACTAAATATAAAATTGAAAGATAAGGAGTCTTCTAAATTTAGACTCCTTATTTTTTATGGTATACGCTGTAAATCTTTATATAAAAATGTTATATTTTAATAACATATGGTATAATATAGGTAAATTTTAATAAAGAGGTATAAAATATGAATTTTACTGAATTAACTATAACGGTGATGTTAAAAGAAGATATTAATTTTCAATATTGTGGATATGTAATAGGAAAAAATATAAATAAGAGTATGCTTTCAGATGAAGATTTAAAGAAGATTCACCCTAAAAAGCAATATAAGCACTATGTTTTTAATAGTTTTTACCCAATAGAAATGGACAAGGTATATAAAAAGAATAGGCTTTATTTCTTTAAGATTAGAGGATTGAGTAATGAATTTATAGAAAAATTAGATAATTGTTTATTAAAACTTAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 6 2730814-2730265 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2730813 30 100.0 35 .............................. TCTGTAGTGAATTTAGTCCCATTTGTGTTCATTGT 2730748 30 100.0 35 .............................. AACAAAAAATATTAGAGTTGCAAAACTAGCAACTC 2730683 30 100.0 35 .............................. GAGGTAATCTTAAGCTTTTAGCATCTTTTCTCAAT 2730618 30 100.0 34 .............................. AAGCTTTGGAGGTAAAGGGAATAATTATGGATAT 2730554 30 100.0 36 .............................. GAGTTACATAAGTATTTATTACGTTGGTATAACTAT 2730488 30 100.0 34 .............................. CCTTCTTTTATTAAAAAACCTCTTACAAAATCTA 2730424 30 100.0 35 .............................. CCTACAGAAGGGAAGTGTTTTATCTTGTTTCCTAG 2730359 30 96.7 35 .................A............ TTTTTTATGTCTACGGGTATGGTGGGTATAAAAGA 2730294 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 9 30 99.6 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : AAGTGGAAGAAACCCATATAAATGCAGAAGATAATATTAAAAAGATAATAGGGGTTTATTGCTAAGATTAGTTATATAAAAAAGAAATAGAATAATAAACAGAGTTCTTGGTTTTAGAGGGAGTTTTTACTCCCCATAAAGCTTAGAAATCGTTATCCAGGGACTTAGCTACTCTTTACTCCCGCTTTAAAGAAAATGGAAGTATTAGAGCTTATCGTCATCGGATAAACTAAAAGCTCTCACATGATGGGAGTTTTTAGTTTTTTAACTTATAAAAATAAGTATATACTTATAGTGTTATGAGATAAAATATAAATAAAAGTTTTCCCAGGTGACTTCAAATGAAAATATAGCTTAGAGTCTTGATTTATAAGGGGTTACATACTATTTTTAAATGTGATTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TATTTACCTTTAAATAGATCCTCAACATAGGATGTATTTAAATTAAGTATTTTTCTTTTTAGCGGATTACGTAGATAGCATATAAATGCTCTTAATAGCAATTTAAGGAAATATATGGTGTAATGGCGTTGTTATAAATTTGAAGGAGTGATATTTCATGAGTATTTTAACAAGTTGTATTATTGGACTTGCTTTTATTGTAATTGGATTGGTATTAAGGGCATATCCACCGCAGCATATAAATAATAGTCTTGGATATAGAACACCATTTTCTATGAAAAATAAAGACACATGGTATGAGGGAAGTCGTTTCTACGGGACAATACTTTTAATAAGTGGTATTATTTTTATACCATTTTCAATATTAATAAGATATTTATATAGCAATAATTTAAATTTATCAATGGGAATATCGTCATTGAGCTTGTTGATTATTATAATTATAGGTATTGTATATACCGAAATACATTTAAGAATGATATTTGATAAGAATGGAACAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 7 2733226-2732936 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2733225 29 100.0 37 ............................. TTAGGAAAGATGACAACAGGAGTAGGAAAAACTATAA 2733159 29 100.0 38 ............................. TGAATTTATTTTAGGTTTTAAAGATATTTCCTTTACAC 2733092 29 100.0 36 ............................. TGGTAGGAGCTTTTAAAGATAAAAATAATGCACAAA 2733027 29 100.0 34 ............................. TTCTTTTATATACATCTTTAAACCATACATAGCA 2732964 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 100.0 36 GTTGAACAATAACAAGAGTTGTATTTAAA # Left flank : TTTAGTTTAAAGGAGAGAATGTAGATGAGTAAAAATTTTAATTATAATTATGCATTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAATAGAGTGTTCAAAACCTGTAAAAAGTATTTGTCACATTTTCAAAAATCTGTATTTAGGGGAGAACTTACACCAGCAAATTTTATATTATTAAAAAAAGATTTAAATAAAGTAATAAATGAAGATGAAGATTTTATATGTATAATAAAACTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCACACAGTTGTACAGGGGAAGACTTGATATTATAAATAAAAGTTTTACCAGGTGATTTTAAATAGGAATATGCTGTAAGATATTGATTTATAAGGGGTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATATACATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTAAATATCTTATTCTATGCTAATATAATAGGGTGAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAACTAGATAGTATATTAAAATTGGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGGCAGTATGGAAAAACCACTACTTTATACATGCTTGAAAGATATTTAAATAAGTTTAAGGATTATTTAGTCATTTCTATAAGTTTTGAAGGGATTGGGGATTTAATTTTTCAAGATGAGAAGGTATTTTCAAAGGAATTTTTACAGATAATGTCTGATTCTCTTTTACTAAATAGCCAGGCATTGTCTGAGTGTTTAGAGGAACAAAAGCCACATGTAGAAAACTTTATTGACTTATCAAGAGTTATAACCAAGTTTATTGTGAAAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 8 2742822-2742529 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2742821 30 100.0 35 .............................. TATGCCTTATTAGGGTTATAATTAGGATTATTTTT 2742756 30 100.0 35 .............................. TATACATAAAATGGGGAAGTGTTTTGATTTTTAGC 2742691 30 100.0 36 .............................. CTGTTTAAGATATAAATATTGTCATCTTCTGTATAA 2742625 30 100.0 37 .............................. AGGATTATTGGCAATACTAGTTATAATAGGAGATATC 2742558 29 86.7 0 ...A............T.-..........A | T [2742543] ========== ====== ====== ====== ============================== ===================================== ================== 5 30 97.3 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAATGTATATACTAGAACTTAAAATATGGAGAGGGGAAGAATATCACAAAAAAGGACTAAAACAGCTTGGGGAATACTTAAATCAGTACGGATTAGAAGAAGGTTATCTTTTAATATTTGATTTTAGAAAAGCTACAAATTTAATAGGTAAAACTGAAGAAACCCATGTAAATGCAGAAGATAATATTAAAAAGATAATAGAGGTTTATTGCTAAGATTAGTTATATAAAAAAGAAATAGAATAAAAAACTAAAAGCTCTCACATGATGGGAGCTTTTAGTTTTTTAACTTATAGTGTTATGTGATAAAATATAAATAAAAGTTTTCCCAGGTGACTTCAAATGGAAGTATAGCTTAGAGTGTTGATTTATAAGGGCTTACATACTATTTTTAAATGTAATTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATAGTTTAAATTGTAATAGTATACTTAACCATAACATGAGATGTTTAATAAAATAATATTATGGAAAAGAGATTTATATTTTAGATCTAATTATTAAATTCAATAGTATAAATTGTAATACTTTTAGAAATAATATATGTATAATCACAATAAAATAAATATAAAAAATAATGTTAATGTACTATTATGGAAACAAAATGATGGATAAAAATGAAGAAAAAATTAAGATTCTCTATTTCAGCAACTTATGAAGATTTAAAAGAAAAAGAAAGGATAGAAATTGATGATATCATTTATATAATTGAATTAGTTTCAGTTATTACATTAATTTTAAAAATCTTTCAATTCATAAATTAAAAGGTATATTTTTTTTAAATCCTTTATACTATAGAAATATAATTAGTGTTATAATATGGAATAATATAAAATATTATGGTAAAATATATATTATAATGAAGATATAAGGAGGTGAAAAAGTGAAAATATATGAATTAACATTA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 9 2745667-2744796 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027782.1 Clostridium tetani strain Mfbjulcb2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2745666 30 100.0 35 .............................. AAGGTTTATGGACTTAAAAAGAGAGGTGAATTTAA 2745601 30 100.0 34 .............................. TGGTTATAGCAACGCATTAGGTAAATTAGTTATT 2745537 30 100.0 35 .............................. TAGAAGTGTTGGTAAATAAAAAAGAGGTAGTTCCT 2745472 30 100.0 35 .............................. TTAGAAGTATTAATAGACACTAAAAATGCAGAAAT 2745407 30 100.0 35 .............................. TAACTAAAGCAGTAAATAAATTTGATAAGTTATCT 2745342 30 100.0 34 .............................. CTGTGTATTACTTTTAAATTATTTTTTAGCATCC 2745278 30 100.0 35 .............................. GTGAGACAAAGGTTTGGATTTGGTAAAGCAGACGC 2745213 30 100.0 34 .............................. GACATTGAAGGAGCACCAACTGAAAAAGAATTCT 2745149 30 100.0 34 .............................. ATTCGTTTAAGAATATTATTTTTTCTAAGAAATC 2745085 30 100.0 36 .............................. CCAACTTTCATGGCGTTAAAAAAACCTGACTTCTCC 2745019 30 100.0 36 .............................. GTTATTTCTTTACTGTCAGCAGGAGTATAACTTCCG 2744953 30 100.0 34 .............................. TAACGAAAATAATTTAGAAGTATGTAATAATTCA 2744889 30 100.0 34 .............................. ACTATTACTAGAAAAACAATTAAAAATTATTAAA 2744825 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 14 30 99.8 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TACTTGTTAAACAAGTTGAAACTTATCAAAGTAGAAGACTAGAAGTTGCAAAAAGTATAGTGGAGGCTATTGGAGGTAATATATACGAGCTGTTATATCATTATTATAAACATGATAAAAAATCATAGTAAAATAAACTTGAAAAAAGCCAATGATATAAAACAAATAATGCAAGTGGAAGGGGAAACTTGGCAAAGATTTTATGGCGAATTTAAAAATATACTTCCAGAGGAATTCGTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCATACAGTTGTACAGGGGAAGACTTGATATTATAAATAAAAGTTTTACCAGGTGGTTTTAAATAGGAATATGCTCTAATATATTGATTTATAAGGGTTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATAGAAATGTTGAAATATCAATGGTTTTATGATATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TATATATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTTAATATCTTGTTCTATGGTAATATAATAGGGTAAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAACTAGATAGTATATTAAAATTGGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGACAGTATGGGAAAACCACTACTTTATATTTGTTAGAGAAAAGACTAAATCATATGAAAGAATACTTGCCTATAAAAATAAGTTTTGAAGCTATAGATACAGAAGGATATAGTAAAGTTGAAAAATTTTTAAGTAGTATAATGATGCAAATAGTGAACTATTTTAGATTTTCAACCAATAAAGAAATGTATAAATTCATAAAAAATCGTGAAAATCAAATTACTAATATGAATGATTTTAATAGTTTTATAACAGATTTAGTTGAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //