Array 1 85034-88406 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRCT01000004.1 Aggregatibacter kilianii strain MELO_68 NODE_4_length_241063_cov_69.9391, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 85034 32 100.0 36 ................................ TCTGCCCCTGCCGATTGGTGGGGTCTGGTTAAAGTT 85102 32 100.0 35 ................................ CATGGATGATTTATTGCAAAAAACGGAACTTGATT 85169 32 100.0 34 ................................ ATGGCATCTAGCCATGCTTGGGCGTCAGATTCGG 85235 32 100.0 34 ................................ CACAGCGCTTGGTTGGTCGCCTCGCTTCCGTTGC 85301 32 100.0 34 ................................ ACCATTTGCCACAGTATTTGCGCCCGTTGCCGTG 85367 32 100.0 33 ................................ CATTGGCGCCGAAGCTAACGCCGACGGTCAGCG 85432 32 100.0 36 ................................ CAAAGTAAAGTTGATTTTTATGTTAACGGACTGAAG 85500 32 100.0 36 ................................ TACGGTGATTTTGGCATCTGTCACGTTATCCCAATC 85568 32 100.0 35 ................................ CACACAATTTTGCGTTTTTCCACTTCCGTTGCTGT 85635 32 100.0 35 ................................ TTTTGCTGCGGGTTATGCAGACGTTGCCGGAAGCA 85702 32 100.0 36 ................................ ATTAAAGACCGCATAGAAACAACTTTTTTGATGTCC 85770 32 100.0 35 ................................ ACAATAAGAGAGACCCTAGGCAATGCCTAGGGTTT 85837 32 100.0 36 ................................ AAAGGGCATCGGTTTAATGAATCAACGTGGCGACTT 85905 32 100.0 34 ................................ GCGCGGATAAACAAGCACCATTACAGACTTACCT 85971 32 100.0 35 ................................ CAACCATGCCAAAGTCAAAAATAGAACGAATCACG 86038 32 100.0 35 ................................ TAAGCCACGCAAGCGCACCATCATTTCCTGACGGC 86105 32 100.0 38 ................................ GACTATGACCGCGTCCGAACAGCTCGAAGCCATGAAAG 86175 32 100.0 35 ................................ ACGGCTGATCGGGATTGTGCGGTTGCGGTTGCTTT 86242 32 100.0 36 ................................ ATTGCTCGCTTAAAATTATCAACGCGCAAAAAATAA 86310 32 100.0 35 ................................ TTGGAACCAGGGTTCGATTAAGTCATTTACGGCGG 86377 32 100.0 36 ................................ TAGTATTGGAAATGGTAAAGGTGAAGGTGAAGGTGA 86445 32 100.0 35 ................................ ACAATCTCCGGCGGACGCAATTCAATGTGAAATTT 86512 32 100.0 33 ................................ TCGGAGTTTATAGCCCCGTGAATATGGGTCTAA 86577 32 100.0 36 ................................ TTTGTATAGCCCGATCCCTTCTAACGGGTTCCCGCT 86645 32 100.0 35 ................................ AGAATCGGCGAATTGTGCGGCAGAATATTTGTGCT 86712 32 100.0 34 ................................ TGCAATTAAGCTGTCTGATAATGATAGTTTTGAT 86778 32 100.0 35 ................................ TTAAATTTTAAGTTTTGAACAAAGGAGCAAAAAAT 86845 32 100.0 35 ................................ AATCGGAGCTTTAAAAATGGCAAAAACAGCAGTAC 86912 32 100.0 36 ................................ CGCTCGTTGCGCGGATAAAAGTGCGGCCTGTTTTTG 86980 32 100.0 34 ................................ TTGGTGTTGACGTTAAACGACAAGAAATCACCGA 87046 32 100.0 34 ................................ CATTTAGTGCTGAGTGTTCTCAACTTGCCACTCG 87112 32 100.0 32 ................................ ATCGTTTGATAATTGCGGGTCGAGCATATAAG 87176 32 100.0 35 ................................ CATATAATCCAAGCTAACATACCGCTGAAAATCAG 87243 32 100.0 34 ................................ AATAAGGAGGCTTGACATGAGCAAAATCATCGAA 87309 32 100.0 33 ................................ AGCAGGGAAGAAATCACGCTTAGCCCACGTTCC 87374 32 100.0 36 ................................ CTTGGGCGATGTTTGATAGCTTTGCGCGCCACAAAG 87442 32 100.0 35 ................................ TACTGACAATGCGCCAATATAAGCTTACCTCGCAC 87509 32 100.0 35 ................................ TCAATTACAGTTGCCATATTTACCCTTTAAATTTC 87576 32 100.0 34 ................................ TTATTAATGCAATATCAAATATTTTTTTTAGAAA 87642 32 100.0 35 ................................ TAAACAAAAATAGGAGAAACATAATGAATCAAGAA 87709 32 100.0 37 ................................ TGGCCCCCTTTGATTGAATTGCATTAAGTAGCTCCAA 87778 32 100.0 36 ................................ AAGTATTGAAATTATGCCGAACTTTCGCAATAGCGG 87846 32 100.0 34 ................................ GTTCGTCTCGCGGTCTGAACCCGGTGCGGTCAAC 87912 32 100.0 35 ................................ TCATCAATAAGACGTTGTGCATCTGAGAACAAGGG 87979 32 100.0 32 ................................ GCGCCGTGCTCAATCTTGGCAGTGCAGACAAA 88043 32 100.0 34 ................................ GGGTGTAACAGAACGCCCCGAACTTCTTCGAGCG 88109 32 90.6 35 ..........T..G.T................ GCCAAAGGTGACCGTGGCAAGGCACATGAAATCGC 88176 32 90.6 34 ..........T..G.T................ CAGTATTTAAGTTAAGGTGTTTAAATTTTATAAA 88242 32 93.8 35 C......T........................ AGGGTACCACACCACCCCGCCGTGCCAGCCTTTAT 88309 32 93.8 34 ..........T..A.................. TCAAAGTAGATCACAAAGGTGGTGAGCATACCGC 88375 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ====================================== ================== 51 32 99.3 35 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGTCATATCGCAAAACATTGCTTAGATTACGGCGTACGCGCGCAATATTCGGTATTTGAATGTGATGTCACGCCTGACCAATGGGTCATGTTGAAAAACAAACTGTTGGAGACCTACGACCCTACATGTGACAGCCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAAGGGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGCTCTCATTAAAACCCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATAAGTTAATTTATTTGTATAACGGCGGTATGGCCGTTATACTTACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTGCTTTTTTAGCTAGGGA # Right flank : CTAACGCTTATATATCAATAAGATCAAGTAAGATCGCAGCCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCTTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACCGCTCTTTTTATTTATCTACGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCGCCCACTAATTCAGGATTATGCACAGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTTCGTCCGCCAAGAAGATTGATGATTTGTACCACTTGCGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //