Array 1 2517-2218 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAGD01000036.1 Brevibacillus laterosporus GI-9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2516 32 100.0 34 ................................ AAAACTTACTGCGCAAAAGATTGTCCGTACTCCA 2450 32 100.0 34 ................................ ATTTTCGGGTTATGGGGCGCATTTTTGTGCTTTG 2384 32 100.0 36 ................................ ATTTTCTTGAGAGCCTGCCGTTGCTGTAGTTTTTGC 2316 32 96.9 35 ...................T............ CTTGATACCGAAACCTACGGACTTAACAACTGGAA 2249 32 71.9 0 ..C...........A...A.GT..TACA.... | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 93.8 35 ATTGCTCCTTGCACGGGAGCACGGATTGAAAC # Left flank : TCAATGATTACGCTACATTTGAGAAGTATATTAATATTTCATCATGGTTCGCAAAAAATGGGTTATGAGACCTTCTAGTATGCTACTTTTTCCTGATACTATCGCTCCTTACACAGGAGCACGGATTGAAACAGAATGGTGTAGAGCGCCACTTCCTTGGTCTTGAGATCGCTCATTCAAGAGGTGTGGATTGAAAAGAACCGAGCGCCCAAGAGTGTGGTGTCTTAAATAGGAACGTGTTTTCTTTGCAAGATATAACAATCTTAATCAGTATTAGGAAACAATGATGGTCATAAAAGGGGGGATAAGCAATTTGTTATCTACTTGGCAAGTGATTGCGAATCTCTAGCTTACATAAAATTTCAAGAGAGTTCGCATCCGCATACTAGCAAGGGGTATTCGATGATTAAGCTAGATTTGAAACTAATAGTGGATTTTCAGTCGAGGTTCGCAATTAATGCTTTATAAGACCTTATAATTTGCTGTTTTTTCCTCATACT # Right flank : CAAATAAACCTTCCTTAAAAAACAGGGGAAGGCTTATTTGGTTTGGACAGCTGAAAATCCCTTGGAATTAATTTAGGATGATGAACGTGTTCCGGATCGGGAGGGGGGCCTTCGCTGCGGCCATAGCCACGAAGATCAGGAATAATAAGTGTATATTTTTTCATTAATTCAGGAGCAACCTTATGCCAGGTTACATGGTTCTACGGGTACCCATGTAGTAGCAGCAACGGGGGCCCGCTTCCACCATACAACAGGAAAATATTCGTTCCAGATGTCTTTATGAGTATGATATGTTTATGCGTTTCATACCTACTAAGGTAAACATTTCAACGGATCACAATACCATTAATCAATGTGCATTATTCTGAATAGAAAACATAAGCATAGGTGAACAAATATCTTGGTCATGTTGAACATGCAAAATCAAAGTTAACTGTCATACACTGTACCATAAATCAATAAGGAGACGGTGCAGATGCGGACCGTCCACCAACGGATTC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:0, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCTCCTTGCACGGGAGCACGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 62401-62035 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAGD01000017.1 Brevibacillus laterosporus GI-9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 62400 36 100.0 30 .................................... TAGATAAAAAACATAGAAAAAAAACCCTTC 62334 36 100.0 30 .................................... TGAAACCAGCAGGATTCAAATTAGGGTTTA 62268 36 100.0 30 .................................... AAAAAGGGAGGTATGAGAAATCAAAGCAGT 62202 36 100.0 30 .................................... GTTCTGTCGATGGTGGGGAATCAGAAGATA 62136 36 100.0 30 .................................... CATTAATCTAGCATATACTTCGCTTTGTTA 62070 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 ATCATATCATATCGAGTTTTAGTAAGGAACTATAGC # Left flank : AAAGCTACGTTACAGCATGCAGAACAAGTATGTATGAGAGACTGAGAACACCAACATTACTCCCTTTGAAGATTCATTCATATGAGTAAATATATGCGAATACTTGTCTTTTTTGATCTACCGGTGAAAAGGAAGCAGGATCGTAAGGCTTACTTTGCATTTAGAAAGTTTTTAATAGCAGATGGATATGATATGCTCCAGTTTTCAGTCTATTCTCGAATTTGTAATGGCAATGAAGGAACACATAAGCATTTGGAAAGGCTGTCACGTAATTTGCCCTCAAAGGGTTCGGTACGATCGTTGATTATTACTGAAAAGCAATATGAAAAGATGAAATTTTTTGTTGGGAAACCAAAAATAAAAGAAGAGAAAGTAAACAGTGTGCAACTAACATTTTTCTGAAAAAGAAAATTATTAATAGGAAGAAAGGAGTTTTTCTTACCTTTTTAAAATACCAAAAGCCTTGAAAGGGTTGATCTTTCAAGGCTTTTTGGGCACGT # Right flank : ATTCTGTCCGTGATCATTCAGAGTTTTTGTTGAAGCCACGTTATTCCAAGATTATTAATGCCGATTGGCGTACTGCTTGCCATGAGATTGAGAAAGCGGGCTATGCAACTGATTCGGAATATGCTGAAAAACTTATTAAACGTATTGAAGAGTACCAACCTTACAAATACGACCAAGGAGCTGATAGAATGGCCACACCTATTTTAATTATCGATCCAGGGCATGGCGGCACTGATTCAGATACAGTGGGTAACGGATTGAGAGAAAAGGATCTCACTCTCCAAATTAGTTTGTATCAATTTAATAGATTTAAAGAGCTAGGCTTGCCCGTAGCGATTACAAGGACAACAGATATCACTCTGAAACCATCCACAACGTACAGGAGCGGTTAAACAAAGCAGGGCTAAGTATTGCATTTCAAACCATATAAACGCTGGTGGTGGCGAAGGTGTGGAGGCGATCCACTCGATTCATGACACTGGTAAACTTGCGAAAGTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATATCATATCGAGTTTTAGTAAGGAACTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //